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The map label for this gene is 78223846

Identifier: 78223846

GI number: 78223846

Start: 2997897

End: 2998268

Strand: Direct

Name: 78223846

Synonym: Gmet_2650

Alternate gene names: NA

Gene position: 2997897-2998268 (Clockwise)

Preceding gene: 78223845

Following gene: 78223863

Centisome position: 75.0

GC content: 54.84

Gene sequence:

>372_bases
ATGATTCCAGAGAAAATGCTGCAAGTACTGAAACACGAGGGGGTTGTGGCCATAGCCACACAGGGTGACGGTGGTCCCCA
TCTGGTTAACACCTGGAACAGTTACATCCAGATTACCCAGGATGGGAAACTGTTGATTCCCGCCGGCTACATGAATACGA
CAGAAGCAAATCTGGCCAAGGACAGCAGATGTCTCATCACCGTGGGAAGCCGCGAGGTGGAAGGTGCCCACGGCCCAGGG
ACAGGCTTTCTCGTTGAAGGCACTGCGGTATTTGTAACGTCAGGCCCGCTGTTCGATGTGGTCAAGGGGAAGTTTCCCTG
GGCAAGGGCGGCATTGGAAGTTACCATCACCTCTGCCACGCAGACGCTGTAA

Upstream 100 bases:

>100_bases
TGACCTTGGGGACATCCAAGAGGGCCGAGATACAGGACGCCGATGGATTCTCCATCGAATTGAGGCAGTGGTGAAAACAC
AAGAAAACGGAGGCACGATA

Downstream 100 bases:

>100_bases
CTTCTTGCGAAGAATGGGGTGCCGGTCTGTAGGTTTAATATTCTAAAAAAGCACATCCTTTTTCTTGAGCCATGGGGTCG
GAGGTTCGAATCGTCTCGGA

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MIPEKMLQVLKHEGVVAIATQGDGGPHLVNTWNSYIQITQDGKLLIPAGYMNTTEANLAKDSRCLITVGSREVEGAHGPG
TGFLVEGTAVFVTSGPLFDVVKGKFPWARAALEVTITSATQTL

Sequences:

>Translated_123_residues
MIPEKMLQVLKHEGVVAIATQGDGGPHLVNTWNSYIQITQDGKLLIPAGYMNTTEANLAKDSRCLITVGSREVEGAHGPG
TGFLVEGTAVFVTSGPLFDVVKGKFPWARAALEVTITSATQTL
>Mature_123_residues
MIPEKMLQVLKHEGVVAIATQGDGGPHLVNTWNSYIQITQDGKLLIPAGYMNTTEANLAKDSRCLITVGSREVEGAHGPG
TGFLVEGTAVFVTSGPLFDVVKGKFPWARAALEVTITSATQTL

Specific function: Functions as a redox protein with a potential of -325 mV [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01243 Pyridox_oxidase [H]

EC number: NA

Molecular weight: Translated: 13052; Mature: 13052

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPEKMLQVLKHEGVVAIATQGDGGPHLVNTWNSYIQITQDGKLLIPAGYMNTTEANLAK
CCHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEEEEECCCCEEEECCCCCCCCCCCCC
DSRCLITVGSREVEGAHGPGTGFLVEGTAVFVTSGPLFDVVKGKFPWARAALEVTITSAT
CCEEEEEECCCCCCCCCCCCCCEEEECEEEEEECCCEEEECCCCCCCCEEEEEEEEECCC
QTL
CCC
>Mature Secondary Structure
MIPEKMLQVLKHEGVVAIATQGDGGPHLVNTWNSYIQITQDGKLLIPAGYMNTTEANLAK
CCHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEEEEECCCCEEEECCCCCCCCCCCCC
DSRCLITVGSREVEGAHGPGTGFLVEGTAVFVTSGPLFDVVKGKFPWARAALEVTITSAT
CCEEEEEECCCCCCCCCCCCCCEEEECEEEEEECCCEEEECCCCCCCCEEEEEEEEECCC
QTL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8119891; 9406543; 10713530 [H]