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The map label for this gene is (hspc4-1 [H]

Identifier: 78223832

GI number: 78223832

Start: 2983225

End: 2983812

Strand: Direct

Name: (hspc4-1 [H]

Synonym: Gmet_2635

Alternate gene names: 78223832

Gene position: 2983225-2983812 (Clockwise)

Preceding gene: 78223828

Following gene: 78223833

Centisome position: 74.63

GC content: 56.12

Gene sequence:

>588_bases
ATGAGACGGCATACGGAACTCAGGACAATGTCCCACAAAGACACTGGCGAATCGGTGGAACCCAGACGGACAACGGGATC
CGGGACAAGTCATGAAACGAAGGGAATAACGAAGAGCGAAACAGAGGGGAGCAGCCGTGAGGTTAGCGTACTTTCCCCGA
TCAGGGAGATGGAACGGTGGTTTGAAGAGTCTCTGAGCCGTCCCTTCTTCGGCATGCACTGGATGCCGTTCAGACAGATG
TTCTCGGAAGTGGGTGAACGGACCGAGTTGATGCCTGCGGTTGACATGTTCGAGGAAGGTGGACATCTGGTGGTTAAAGC
CGAACTCCCCGGCATCACCAAAGAAAACCTCAATCTCCGGATTGTCGACAACAACCTGATCCTCTCCGGTGAGAGAAGCA
GCGAAGAGAAGATCGAACGGGGCAACTACCTGCGGCTCGAACGGTCCCACGGCTCCTTCAGCCGGACCCTGAGCCTTCCC
GATGGCCTCGATACCGAGCACATTAAGGCCGGCTTCAAGGACGGCGTGCTTGAGGTACGGATTCCGAGGACCGAAAGCAG
CACGGTTCGCGAGATCACCGTTGAGTAA

Upstream 100 bases:

>100_bases
CTGGCACCTGTCAACGACGCCGCCACAGGATATTGACATCCGTTTTCAATTAAGTATACTGGAATCAGGAATACTTCAAA
AAAGAAAGGGGTGTTGATAC

Downstream 100 bases:

>100_bases
TGAGGGCAGGAGGTGGAAAGGAGAAGGGGAAGCGAAATGCTTCCCCTTTTTTGCATCCGGGGATTGCGCTGCGGACCGCG
GGGACGTACAATCTGCCGAC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRRHTELRTMSHKDTGESVEPRRTTGSGTSHETKGITKSETEGSSREVSVLSPIREMERWFEESLSRPFFGMHWMPFRQM
FSEVGERTELMPAVDMFEEGGHLVVKAELPGITKENLNLRIVDNNLILSGERSSEEKIERGNYLRLERSHGSFSRTLSLP
DGLDTEHIKAGFKDGVLEVRIPRTESSTVREITVE

Sequences:

>Translated_195_residues
MRRHTELRTMSHKDTGESVEPRRTTGSGTSHETKGITKSETEGSSREVSVLSPIREMERWFEESLSRPFFGMHWMPFRQM
FSEVGERTELMPAVDMFEEGGHLVVKAELPGITKENLNLRIVDNNLILSGERSSEEKIERGNYLRLERSHGSFSRTLSLP
DGLDTEHIKAGFKDGVLEVRIPRTESSTVREITVE
>Mature_195_residues
MRRHTELRTMSHKDTGESVEPRRTTGSGTSHETKGITKSETEGSSREVSVLSPIREMERWFEESLSRPFFGMHWMPFRQM
FSEVGERTELMPAVDMFEEGGHLVVKAELPGITKENLNLRIVDNNLILSGERSSEEKIERGNYLRLERSHGSFSRTLSLP
DGLDTEHIKAGFKDGVLEVRIPRTESSTVREITVE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 22262; Mature: 22262

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHTELRTMSHKDTGESVEPRRTTGSGTSHETKGITKSETEGSSREVSVLSPIREMERW
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FEESLSRPFFGMHWMPFRQMFSEVGERTELMPAVDMFEEGGHLVVKAELPGITKENLNLR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEE
IVDNNLILSGERSSEEKIERGNYLRLERSHGSFSRTLSLPDGLDTEHIKAGFKDGVLEVR
EEECCEEEECCCCCHHHHHCCCEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEE
IPRTESSTVREITVE
ECCCCCCCEEEEECC
>Mature Secondary Structure
MRRHTELRTMSHKDTGESVEPRRTTGSGTSHETKGITKSETEGSSREVSVLSPIREMERW
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FEESLSRPFFGMHWMPFRQMFSEVGERTELMPAVDMFEEGGHLVVKAELPGITKENLNLR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEE
IVDNNLILSGERSSEEKIERGNYLRLERSHGSFSRTLSLPDGLDTEHIKAGFKDGVLEVR
EEECCEEEECCCCCHHHHHCCCEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEE
IPRTESSTVREITVE
ECCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA