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The map label for this gene is 78223785

Identifier: 78223785

GI number: 78223785

Start: 2939767

End: 2940255

Strand: Direct

Name: 78223785

Synonym: Gmet_2588

Alternate gene names: NA

Gene position: 2939767-2940255 (Clockwise)

Preceding gene: 78223784

Following gene: 78223786

Centisome position: 73.54

GC content: 54.4

Gene sequence:

>489_bases
GTGGGTCAATTTTCGATTGCCGTTGACAGCGAAGGGGCCTACATCCACCATTCCAGGTTCAACGGCGCCAATTTTACCGG
CGCCGACATGAAGAAGGTGAATATTGAAAAAGGGAACTTCACCGACGCCAACCTGACAAATGCCAGTTTTACGGGGGCAA
AGCTCAGATACGCGACATTCAAGGGCGCCGTTCTGAAAGGAGCGGATTTCTCCTTCGCAGACTTGTCCTATACCGACCTC
AGTTCCCTGGATCTGGGAGGGGCAAATTTCCGGGGCGCCAACCTGGAGGGGACGACACTGACGGGGGCCACGTTCAACCG
TGCGGATTTCAGGGGAGCAGACCTGACCCGTTCCCGCTACGGTGTGACGACCGTTTATGATTCTTCTTCAAGCAGATTGG
TTGAAGATTTCGCGCCGGTCACTTGCGCTGAACTTCAAGATGCTGGAGCGACAATCGATTCGACGACGAAGTGCGTGAAG
GGGCATTAA

Upstream 100 bases:

>100_bases
AGCGCCGAGCTGGCATTCTCGGGCAGCAACTGCCGACACCCCAGATGGATGATTAACCCAGGAAGGTGGGTCATTTTTCA
ATTGCCGATCAACCGGTAAA

Downstream 100 bases:

>100_bases
CAGGAGAAATAAGCGACATTTCCTGATTGAGAATGCGGACAAAATTTGCAAGCGTTAATCGGGTAAGTTCCGGGGAGACA
GAGTTGGAGAAGCATCTATT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MGQFSIAVDSEGAYIHHSRFNGANFTGADMKKVNIEKGNFTDANLTNASFTGAKLRYATFKGAVLKGADFSFADLSYTDL
SSLDLGGANFRGANLEGTTLTGATFNRADFRGADLTRSRYGVTTVYDSSSSRLVEDFAPVTCAELQDAGATIDSTTKCVK
GH

Sequences:

>Translated_162_residues
MGQFSIAVDSEGAYIHHSRFNGANFTGADMKKVNIEKGNFTDANLTNASFTGAKLRYATFKGAVLKGADFSFADLSYTDL
SSLDLGGANFRGANLEGTTLTGATFNRADFRGADLTRSRYGVTTVYDSSSSRLVEDFAPVTCAELQDAGATIDSTTKCVK
GH
>Mature_161_residues
GQFSIAVDSEGAYIHHSRFNGANFTGADMKKVNIEKGNFTDANLTNASFTGAKLRYATFKGAVLKGADFSFADLSYTDLS
SLDLGGANFRGANLEGTTLTGATFNRADFRGADLTRSRYGVTTVYDSSSSRLVEDFAPVTCAELQDAGATIDSTTKCVKG
H

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 17210; Mature: 17079

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQFSIAVDSEGAYIHHSRFNGANFTGADMKKVNIEKGNFTDANLTNASFTGAKLRYATF
CCEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
KGAVLKGADFSFADLSYTDLSSLDLGGANFRGANLEGTTLTGATFNRADFRGADLTRSRY
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
GVTTVYDSSSSRLVEDFAPVTCAELQDAGATIDSTTKCVKGH
CEEEEEECCCCHHHHHCCCEEEEHHHHCCCCCCCCCEEECCC
>Mature Secondary Structure 
GQFSIAVDSEGAYIHHSRFNGANFTGADMKKVNIEKGNFTDANLTNASFTGAKLRYATF
CEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
KGAVLKGADFSFADLSYTDLSSLDLGGANFRGANLEGTTLTGATFNRADFRGADLTRSRY
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
GVTTVYDSSSSRLVEDFAPVTCAELQDAGATIDSTTKCVKGH
CEEEEEECCCCHHHHHCCCEEEEHHHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA