Click here to switch to the map view.

The map label for this gene is 78223751

Identifier: 78223751

GI number: 78223751

Start: 2899321

End: 2900535

Strand: Reverse

Name: 78223751

Synonym: Gmet_2554

Alternate gene names: NA

Gene position: 2900535-2899321 (Counterclockwise)

Preceding gene: 78223752

Following gene: 78223750

Centisome position: 72.56

GC content: 61.23

Gene sequence:

>1215_bases
ATGATTGATCTCCTGAAAACCCTCGCCGTCCTCGTCGCTGTGGTCGTGATGGTGCGCCGCAGGTGGCACCTGGGAGCGGT
CATGGCCCTGGGGGCGGCGTTCCTGGCATTCTCCTACCTCACGCCGCCGCTCAAGTTTCTTGGCGGGGCATGGGTAGCCC
TTGCGTCTCCGAAGTCTCTGGAGATGACGGCCACCCTTGTCTTTACCATGATCATGGAGCATATCCTCCGCACGACCGGT
ACCCTGAGGCGGATGGTGGCGAGCCTTTCGGAGGTTCTCCCCGATTCCCGCCTCATCATGGCCGCCATGCCTGCCATGAT
CGGGATGCTTCCTTCCCCGGGGGGAGCGGTCTTCTCGGCCCCCATGGTGCGGGAGGCCTCTGCCCACCTGACGCTCCCCG
CTGACCAGAAGGCGTTCATCAACTACTGGTACCGTCACCCCTGGGAATACATCTCACCCCTCTATCCCGGCATTATCCTG
GTGGCGGGGCTCTCGCGCATTCCCTACCAGAAGATCGTTCTGGCGAACAGCGCCTTTGCCGTTTCCGTGATCTTCTGGGG
AGTCATCTTCTGCTTCCGGGGAGTCGGTTCCGCACCGGTGCCCGTGGGGGAAACGGTGGGCAAGCGACGGGCGCTCAGCA
CCTTTATCATTTCAGTGGCGCCCATTCTGGCGACGCTCATCTTTGTGGTGGTGCTGCAGGTCAATCCGGTGGTGGCCATG
GGGGGAATGACAGCGCTTCTTTTTGCGGTTCACCGCTACGGACCGGCCAGAATTGTGACGACACTGAGGGAGAGTGTCTC
CGTCAAGGCCCTTTCCCTTATTTTCGGGATCATGATCTTCCAGGAAACCCTGCGTCTCACCGGAGCCCTGGACGGGATAT
CGCATTTTTTCGTGGCGAGCGGCCTGCCAGTGCTCTTCATCATTACGGCCATTCCGTTCCTGGCGGGGGTCATGACGGGG
CTTACCGTGGCCTTCGTTGGGATCACCTTTCCCATCCTGATGCCGCTCATGGGGGGAGACATTCCCTCCCTGGGGCTTCT
TTCCCTCGCCTTTGGCAGCGGTTTCGCCGGGGTGATGCTCTCGCCGGTCCATCTCTGTCTCGTGCTGACGGGGGAATACT
TCGGGGCTGACATGGCCCGGGTCTTCCGTCGTCTTTGGATTCCCCAGGCCCTAGTGCTTGCGGCGGCCGTGGTGCCGGTG
TATATTTTCTCATGA

Upstream 100 bases:

>100_bases
GGCGGGTGGTCAGGAGATAGCCGCTCTCGGAGGCATACAGTGTAATTACGGAAAAAGGGACGGTTTTGGCGTCCCTTTTT
CCTTTTGATCGGTACGGTGC

Downstream 100 bases:

>100_bases
CCGTGCCGTGATGCGTTGCGCATTGCGGTTTTTTCCGTACCCGAGGAGGTTTTAATGGCAAAGCGGATTGTGATTCTAAT
GCTGCTGGCGTTCACCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MIDLLKTLAVLVAVVVMVRRRWHLGAVMALGAAFLAFSYLTPPLKFLGGAWVALASPKSLEMTATLVFTMIMEHILRTTG
TLRRMVASLSEVLPDSRLIMAAMPAMIGMLPSPGGAVFSAPMVREASAHLTLPADQKAFINYWYRHPWEYISPLYPGIIL
VAGLSRIPYQKIVLANSAFAVSVIFWGVIFCFRGVGSAPVPVGETVGKRRALSTFIISVAPILATLIFVVVLQVNPVVAM
GGMTALLFAVHRYGPARIVTTLRESVSVKALSLIFGIMIFQETLRLTGALDGISHFFVASGLPVLFIITAIPFLAGVMTG
LTVAFVGITFPILMPLMGGDIPSLGLLSLAFGSGFAGVMLSPVHLCLVLTGEYFGADMARVFRRLWIPQALVLAAAVVPV
YIFS

Sequences:

>Translated_404_residues
MIDLLKTLAVLVAVVVMVRRRWHLGAVMALGAAFLAFSYLTPPLKFLGGAWVALASPKSLEMTATLVFTMIMEHILRTTG
TLRRMVASLSEVLPDSRLIMAAMPAMIGMLPSPGGAVFSAPMVREASAHLTLPADQKAFINYWYRHPWEYISPLYPGIIL
VAGLSRIPYQKIVLANSAFAVSVIFWGVIFCFRGVGSAPVPVGETVGKRRALSTFIISVAPILATLIFVVVLQVNPVVAM
GGMTALLFAVHRYGPARIVTTLRESVSVKALSLIFGIMIFQETLRLTGALDGISHFFVASGLPVLFIITAIPFLAGVMTG
LTVAFVGITFPILMPLMGGDIPSLGLLSLAFGSGFAGVMLSPVHLCLVLTGEYFGADMARVFRRLWIPQALVLAAAVVPV
YIFS
>Mature_404_residues
MIDLLKTLAVLVAVVVMVRRRWHLGAVMALGAAFLAFSYLTPPLKFLGGAWVALASPKSLEMTATLVFTMIMEHILRTTG
TLRRMVASLSEVLPDSRLIMAAMPAMIGMLPSPGGAVFSAPMVREASAHLTLPADQKAFINYWYRHPWEYISPLYPGIIL
VAGLSRIPYQKIVLANSAFAVSVIFWGVIFCFRGVGSAPVPVGETVGKRRALSTFIISVAPILATLIFVVVLQVNPVVAM
GGMTALLFAVHRYGPARIVTTLRESVSVKALSLIFGIMIFQETLRLTGALDGISHFFVASGLPVLFIITAIPFLAGVMTG
LTVAFVGITFPILMPLMGGDIPSLGLLSLAFGSGFAGVMLSPVHLCLVLTGEYFGADMARVFRRLWIPQALVLAAAVVPV
YIFS

Specific function: Unknown

COG id: COG1906

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43380; Mature: 43380

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLLKTLAVLVAVVVMVRRRWHLGAVMALGAAFLAFSYLTPPLKFLGGAWVALASPKSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCH
EMTATLVFTMIMEHILRTTGTLRRMVASLSEVLPDSRLIMAAMPAMIGMLPSPGGAVFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PMVREASAHLTLPADQKAFINYWYRHPWEYISPLYPGIILVAGLSRIPYQKIVLANSAFA
CHHHHCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHEEECCHHH
VSVIFWGVIFCFRGVGSAPVPVGETVGKRRALSTFIISVAPILATLIFVVVLQVNPVVAM
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GGMTALLFAVHRYGPARIVTTLRESVSVKALSLIFGIMIFQETLRLTGALDGISHFFVAS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPVLFIITAIPFLAGVMTGLTVAFVGITFPILMPLMGGDIPSLGLLSLAFGSGFAGVML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHH
SPVHLCLVLTGEYFGADMARVFRRLWIPQALVLAAAVVPVYIFS
HHHHHHHHHHCHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDLLKTLAVLVAVVVMVRRRWHLGAVMALGAAFLAFSYLTPPLKFLGGAWVALASPKSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCH
EMTATLVFTMIMEHILRTTGTLRRMVASLSEVLPDSRLIMAAMPAMIGMLPSPGGAVFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PMVREASAHLTLPADQKAFINYWYRHPWEYISPLYPGIILVAGLSRIPYQKIVLANSAFA
CHHHHCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHEEECCHHH
VSVIFWGVIFCFRGVGSAPVPVGETVGKRRALSTFIISVAPILATLIFVVVLQVNPVVAM
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GGMTALLFAVHRYGPARIVTTLRESVSVKALSLIFGIMIFQETLRLTGALDGISHFFVAS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPVLFIITAIPFLAGVMTGLTVAFVGITFPILMPLMGGDIPSLGLLSLAFGSGFAGVML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHH
SPVHLCLVLTGEYFGADMARVFRRLWIPQALVLAAAVVPVYIFS
HHHHHHHHHHCHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA