Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78223748

Identifier: 78223748

GI number: 78223748

Start: 2897231

End: 2897653

Strand: Reverse

Name: 78223748

Synonym: Gmet_2551

Alternate gene names: NA

Gene position: 2897653-2897231 (Counterclockwise)

Preceding gene: 78223749

Following gene: 78223747

Centisome position: 72.49

GC content: 60.76

Gene sequence:

>423_bases
ATGTTCGGGCTGTTCAGAAAGAAGGTCGGCGAGCCAATCGAGTTCGGGAGTACCGACGCGGCTTTTGACTATGCGTGCCG
CAACCTTGAGAACCGGATTCTTCTGGAGGCGGTTATCCCTGCCCTGGTGGAGGAACGGCGGGGGATGAGCCCGGAAGGAG
AGCAGCTTTTTTTCATACGGCTTGCCAACCGTGAGGGTGGCAAAGTGATCGAGGCCTGCACCCTCAAGGAATCGCTCCGA
CATCCTGCCGTGGGGGACCTGGTTGGCTACCGGGTGGTGAAGGTCGAACCCGAACTCCCCGAGCCCTTTGACCTCCTCGG
CTTCATAGCCTGTCGGCTCCAACCGGTCTACGTGCCGGGAAGGGGGTGGCGGATCGCGGAAAGCTTCGTCCCCGACAACA
TCAAGCCGACCTTGCGGATGTGA

Upstream 100 bases:

>100_bases
GGTGGCCGAGTTCGCCCCCGCCCCTCGGGAACTGGGCGGTAGCGGCGCCATTGTCGTCTTTCTCAGGACGCCGGGCAAGA
AGGGCGATTAAGGGGGAACC

Downstream 100 bases:

>100_bases
CCTCCCATGATCAAAATATTCATCGACAATCCGCTTCTTCTTCTCTTCGTCGTCGCCGCCATCGGGTATCCCCTCGGCCG
GATCCGGATCAGGGGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MFGLFRKKVGEPIEFGSTDAAFDYACRNLENRILLEAVIPALVEERRGMSPEGEQLFFIRLANREGGKVIEACTLKESLR
HPAVGDLVGYRVVKVEPELPEPFDLLGFIACRLQPVYVPGRGWRIAESFVPDNIKPTLRM

Sequences:

>Translated_140_residues
MFGLFRKKVGEPIEFGSTDAAFDYACRNLENRILLEAVIPALVEERRGMSPEGEQLFFIRLANREGGKVIEACTLKESLR
HPAVGDLVGYRVVKVEPELPEPFDLLGFIACRLQPVYVPGRGWRIAESFVPDNIKPTLRM
>Mature_140_residues
MFGLFRKKVGEPIEFGSTDAAFDYACRNLENRILLEAVIPALVEERRGMSPEGEQLFFIRLANREGGKVIEACTLKESLR
HPAVGDLVGYRVVKVEPELPEPFDLLGFIACRLQPVYVPGRGWRIAESFVPDNIKPTLRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15791; Mature: 15791

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLFRKKVGEPIEFGSTDAAFDYACRNLENRILLEAVIPALVEERRGMSPEGEQLFFIR
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
LANREGGKVIEACTLKESLRHPAVGDLVGYRVVKVEPELPEPFDLLGFIACRLQPVYVPG
EECCCCCCEEHHHHHHHHHCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCEEEEECC
RGWRIAESFVPDNIKPTLRM
CCCEEHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFGLFRKKVGEPIEFGSTDAAFDYACRNLENRILLEAVIPALVEERRGMSPEGEQLFFIR
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
LANREGGKVIEACTLKESLRHPAVGDLVGYRVVKVEPELPEPFDLLGFIACRLQPVYVPG
EECCCCCCEEHHHHHHHHHCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCEEEEECC
RGWRIAESFVPDNIKPTLRM
CCCEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA