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The map label for this gene is yidE [C]

Identifier: 78223747

GI number: 78223747

Start: 2895584

End: 2897224

Strand: Reverse

Name: yidE [C]

Synonym: Gmet_2550

Alternate gene names: 78223747

Gene position: 2897224-2895584 (Counterclockwise)

Preceding gene: 78223748

Following gene: 78223742

Centisome position: 72.48

GC content: 64.05

Gene sequence:

>1641_bases
ATGATCAAAATATTCATCGACAATCCGCTTCTTCTTCTCTTCGTCGTCGCCGCCATCGGGTATCCCCTCGGCCGGATCCG
GATCAGGGGGTCGAGCCTCGGCGTGGCGGCGGTCCTCTTTGTCGGCCTTGGCATCGGCGCGCTCCATCCGGAGCTGAAAC
TCCCTGAAATTGTCTATGTCCTGGGGCTTGCCCTCTTTGTCTATACCATCGGGCTCGCCAGCGGGCCGGCCTTTGTGGCG
TCGCTCAAGGAGGACGGGGTTCGGAACAACCTCCTCATTCTCGGCGTTCTTGTGCTCGCGGCGGCCCTCACCGTAGCTGC
CCAGCGGTTTCTTGCCCTTCCGGCCACAATCACCGCCGGCCTTTTCGCCGGCAGTCTCACCAATACCCCGGCCCTTGCCG
GCGCCCTTGAAACCATCAAGCACGTGGCGCCGCAAAATCTCATGGAACAGCTCCTGGCCGAGCCGGTCGTGGGCTACTCC
ATCGCCTATCCCATGGGGGTTATGGGGGTGGTGCTCGCCATCAGCCTCGTCCAGAAGCTCTGGCGGATCGACTACGCGGA
AGAGGCGGCACGGACCAGGATCGCCGGCGCCGCCACCGAAAGCCTGAGGTCCAGAACAATCCGGGTCACTTGGCCCCAGG
CCGGACGACAGACCGTTGCGGCACTCTCTCATCAGCAAAAGTGGGACGTGGTTTTCGGCAGAATCAAGCGCGGGGATGAA
TGTCTGCTGACCGGGCCGGAGGTCCGCTTCCGCCCGGGGGATCTGGTGCTGGCGGTCGGTACCGATGTGGAACTGCAGCA
TGTGGCGGAGGTTCTCGGCGAGGTGAGCGAAGAGGAGATTACCGTCGACCGGAGCGAGTTCGACTACCGGCGGATCTTCG
TCTCCAATCCGCGGGTGGCCGGCCGGCGGCTGGGGAGCCTGAATCTCTTCGAACGGTTCGGCGCCACGGTAACCAGGGTC
CGGAGGGGTGACGACGATTTCCTCCCCCACGACGACATGGTGCTGGAGTTGGGGGACCGGGTCCGGGTGGTCACCCACCG
GGATCGGATGGGGGAGGTGACGGCCCTGTTCGGCGACTCCTACCGGGCGGTTTCCGAAGTGGACATCCTTACCTTCAGCC
TGGGACTTGCTCTGGGGCTGTTGCTCGGCATCGTGCCGTTTCCCCTGCCGGGGGGGGTGACGCTCAAGCTCGGCTTTGCG
GGCGGCCCCCTCATCGTGGCGCTCGTCCTCGGAACTCTCGGCCGCTCGGGAGGAATGATCTGGAGCCTCCCCTACAGCGC
CAACATGACACTGCGCCAGATCGGTCTCGTCCTCTTCCTGGCCGGCATCGGCACCCGGGCCGGCTACGGCTTCGTCTCCA
CCCTTGCCAAGGGTGGCGGGTTCGCCATCTTCGCCGCAGGAGCGGTGGTCACCTGCTTTGCAGCCCTTACCACCCTATGG
GTCGGTCACCGGATCCTCAAGATTCCCATGGGGATCCTCATCGGCATGGTGGCCGGCCTCCAGACCCAACCCGCGGTTCT
CGGTTATGCCCTGGAGCAGACCGGCAACGATCTCCCCAACATCGGCTACGCCTCGGTCTACCCGGTCGCAACCATCGGGA
AGATACTCATTGTCCAGGTGCTTTTGTCCTTACTGATGTGA

Upstream 100 bases:

>100_bases
CTGTCGGCTCCAACCGGTCTACGTGCCGGGAAGGGGGTGGCGGATCGCGGAAAGCTTCGTCCCCGACAACATCAAGCCGA
CCTTGCGGATGTGACCTCCC

Downstream 100 bases:

>100_bases
TTCCCTTCAGCAGACCGGATAGCGGCCAGCCGCCAGTTCCATGCAGAATCCGTTGATACCAGCCAGCCTCTGGCCGATGA
TCTCCTCGGCCTTTGCCGAA

Product: TrkA-C:YidE/YbjL duplication

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MIKIFIDNPLLLLFVVAAIGYPLGRIRIRGSSLGVAAVLFVGLGIGALHPELKLPEIVYVLGLALFVYTIGLASGPAFVA
SLKEDGVRNNLLILGVLVLAAALTVAAQRFLALPATITAGLFAGSLTNTPALAGALETIKHVAPQNLMEQLLAEPVVGYS
IAYPMGVMGVVLAISLVQKLWRIDYAEEAARTRIAGAATESLRSRTIRVTWPQAGRQTVAALSHQQKWDVVFGRIKRGDE
CLLTGPEVRFRPGDLVLAVGTDVELQHVAEVLGEVSEEEITVDRSEFDYRRIFVSNPRVAGRRLGSLNLFERFGATVTRV
RRGDDDFLPHDDMVLELGDRVRVVTHRDRMGEVTALFGDSYRAVSEVDILTFSLGLALGLLLGIVPFPLPGGVTLKLGFA
GGPLIVALVLGTLGRSGGMIWSLPYSANMTLRQIGLVLFLAGIGTRAGYGFVSTLAKGGGFAIFAAGAVVTCFAALTTLW
VGHRILKIPMGILIGMVAGLQTQPAVLGYALEQTGNDLPNIGYASVYPVATIGKILIVQVLLSLLM

Sequences:

>Translated_546_residues
MIKIFIDNPLLLLFVVAAIGYPLGRIRIRGSSLGVAAVLFVGLGIGALHPELKLPEIVYVLGLALFVYTIGLASGPAFVA
SLKEDGVRNNLLILGVLVLAAALTVAAQRFLALPATITAGLFAGSLTNTPALAGALETIKHVAPQNLMEQLLAEPVVGYS
IAYPMGVMGVVLAISLVQKLWRIDYAEEAARTRIAGAATESLRSRTIRVTWPQAGRQTVAALSHQQKWDVVFGRIKRGDE
CLLTGPEVRFRPGDLVLAVGTDVELQHVAEVLGEVSEEEITVDRSEFDYRRIFVSNPRVAGRRLGSLNLFERFGATVTRV
RRGDDDFLPHDDMVLELGDRVRVVTHRDRMGEVTALFGDSYRAVSEVDILTFSLGLALGLLLGIVPFPLPGGVTLKLGFA
GGPLIVALVLGTLGRSGGMIWSLPYSANMTLRQIGLVLFLAGIGTRAGYGFVSTLAKGGGFAIFAAGAVVTCFAALTTLW
VGHRILKIPMGILIGMVAGLQTQPAVLGYALEQTGNDLPNIGYASVYPVATIGKILIVQVLLSLLM
>Mature_546_residues
MIKIFIDNPLLLLFVVAAIGYPLGRIRIRGSSLGVAAVLFVGLGIGALHPELKLPEIVYVLGLALFVYTIGLASGPAFVA
SLKEDGVRNNLLILGVLVLAAALTVAAQRFLALPATITAGLFAGSLTNTPALAGALETIKHVAPQNLMEQLLAEPVVGYS
IAYPMGVMGVVLAISLVQKLWRIDYAEEAARTRIAGAATESLRSRTIRVTWPQAGRQTVAALSHQQKWDVVFGRIKRGDE
CLLTGPEVRFRPGDLVLAVGTDVELQHVAEVLGEVSEEEITVDRSEFDYRRIFVSNPRVAGRRLGSLNLFERFGATVTRV
RRGDDDFLPHDDMVLELGDRVRVVTHRDRMGEVTALFGDSYRAVSEVDILTFSLGLALGLLLGIVPFPLPGGVTLKLGFA
GGPLIVALVLGTLGRSGGMIWSLPYSANMTLRQIGLVLFLAGIGTRAGYGFVSTLAKGGGFAIFAAGAVVTCFAALTTLW
VGHRILKIPMGILIGMVAGLQTQPAVLGYALEQTGNDLPNIGYASVYPVATIGKILIVQVLLSLLM

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=546, Percent_Identity=29.8534798534799, Blast_Score=252, Evalue=5e-68,
Organism=Escherichia coli, GI1787071, Length=551, Percent_Identity=26.6787658802178, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 58150; Mature: 58150

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIFIDNPLLLLFVVAAIGYPLGRIRIRGSSLGVAAVLFVGLGIGALHPELKLPEIVYV
CEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCHHHCCCCCCCHHHHHH
LGLALFVYTIGLASGPAFVASLKEDGVRNNLLILGVLVLAAALTVAAQRFLALPATITAG
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFAGSLTNTPALAGALETIKHVAPQNLMEQLLAEPVVGYSIAYPMGVMGVVLAISLVQKL
HHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
WRIDYAEEAARTRIAGAATESLRSRTIRVTWPQAGRQTVAALSHQQKWDVVFGRIKRGDE
HCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCE
CLLTGPEVRFRPGDLVLAVGTDVELQHVAEVLGEVSEEEITVDRSEFDYRRIFVSNPRVA
EEEECCCEEECCCCEEEEECCCCCHHHHHHHHHCCCHHHEEEECCCCCEEEEEECCCCHH
GRRLGSLNLFERFGATVTRVRRGDDDFLPHDDMVLELGDRVRVVTHRDRMGEVTALFGDS
HHHCCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHEECCCCEEEEEECCCCCCEEEEECCC
YRAVSEVDILTFSLGLALGLLLGIVPFPLPGGVTLKLGFAGGPLIVALVLGTLGRSGGMI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEE
WSLPYSANMTLRQIGLVLFLAGIGTRAGYGFVSTLAKGGGFAIFAAGAVVTCFAALTTLW
EECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
VGHRILKIPMGILIGMVAGLQTQPAVLGYALEQTGNDLPNIGYASVYPVATIGKILIVQV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHH
LLSLLM
HHHHHC
>Mature Secondary Structure
MIKIFIDNPLLLLFVVAAIGYPLGRIRIRGSSLGVAAVLFVGLGIGALHPELKLPEIVYV
CEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCHHHCCCCCCCHHHHHH
LGLALFVYTIGLASGPAFVASLKEDGVRNNLLILGVLVLAAALTVAAQRFLALPATITAG
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFAGSLTNTPALAGALETIKHVAPQNLMEQLLAEPVVGYSIAYPMGVMGVVLAISLVQKL
HHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
WRIDYAEEAARTRIAGAATESLRSRTIRVTWPQAGRQTVAALSHQQKWDVVFGRIKRGDE
HCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCE
CLLTGPEVRFRPGDLVLAVGTDVELQHVAEVLGEVSEEEITVDRSEFDYRRIFVSNPRVA
EEEECCCEEECCCCEEEEECCCCCHHHHHHHHHCCCHHHEEEECCCCCEEEEEECCCCHH
GRRLGSLNLFERFGATVTRVRRGDDDFLPHDDMVLELGDRVRVVTHRDRMGEVTALFGDS
HHHCCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHEECCCCEEEEEECCCCCCEEEEECCC
YRAVSEVDILTFSLGLALGLLLGIVPFPLPGGVTLKLGFAGGPLIVALVLGTLGRSGGMI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEE
WSLPYSANMTLRQIGLVLFLAGIGTRAGYGFVSTLAKGGGFAIFAAGAVVTCFAALTTLW
EECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
VGHRILKIPMGILIGMVAGLQTQPAVLGYALEQTGNDLPNIGYASVYPVATIGKILIVQV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHH
LLSLLM
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA