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The map label for this gene is pqqL [C]

Identifier: 78223728

GI number: 78223728

Start: 2870657

End: 2872096

Strand: Reverse

Name: pqqL [C]

Synonym: Gmet_2529

Alternate gene names: 78223728

Gene position: 2872096-2870657 (Counterclockwise)

Preceding gene: 78223729

Following gene: 78223727

Centisome position: 71.85

GC content: 62.71

Gene sequence:

>1440_bases
ATGATCATCGTGAAACGATTTGCACTCATCATTCTTGTAGCGCTGCTGCCCGTTGTCGCCTTCGGGGCCGAGGCGAAGAA
GGCCGATCCCCGCACCATGACTTTCCCGCCGCTTGTTTTCGAGGTGCCGAAGACCGAGCGGGTCGTGCTGAATAACGGCA
TGGTCGTCCATATGCTTCCCGACCGGGAGCTTCCCCTGGTGAGCCTCACCGCCTACGTGAACGTGGGGAGTATCTACGAG
CCGGCCGACAAGACGGGGCTCGCCGGCCTCACCGGCGCGGTCATGCGGAGCGGCGGCACCAGGGAACTTGCCCCCTCGGC
CTTGGACGCGGAGCTTGAGTTCATGGCCTCGGGGGTGGAGTCGAGCATTGGCGCGGATTCGGGGGGCGTCTCCCTGACCT
GTCTCAAGCGGAACCTTCCCCGGACCCTGGAGCTTTTTGCCCAGGTGATGATGGCCCCAGCCTTCAGCGAGGACCGGGTG
GCCCTGGCCAAGAAGCGGACCATCGAGGCCCTGCGCCGCCAGAACGATGATTCCAAGGAGATCGCCGACCGGGAGTTCCA
GAAGGCCGTCTATCCCAACCACCCCCTGGGGCGGGTCCCCACCGTCGAGACGGTCACCGCCATCACCCGCGATGACATGG
TGGCCTTCCATAGGGAGTATTTCCATCCCAATAACGTGATCCTCGCCGTTGCCGGCGACTTCGACAAGAAGGAGATGATC
GCCCTCCTGGAGAAGACCTTTGCCGGGTGGAAGCGTGAGGAGATCGCCTTCCCCTCCGTCCCAGAGCCGGCCAGGGAGGT
GAAGCCCGTCGTGCTCCTGGCCAGAAAGGCCGTGCCCCAGTCGGCCATCCGCATGGGGCACCCGGGAATCGACAAGAACA
ACCCCGACCTCTATGCCATTCGGGTCATGGACTACATCCTGGGGGGCGGCTTCACCTCTCGTCTCATGACCGAGATCCGC
TCCAACGAGGGGCTTGCCTACAACGTCCACGCCTCCTTCGACATCGGCAGACGCTTCATCGGCACCTTCGAGGCCGAGAC
CGAAACCAAGAGCGAAACCACCGCCAAGGCCATCGGCCTCATGCGCGCAATCATCGCCGGCATGACGAAGGAGCCGGTCA
CCGACGCCGAGCTGACCCTGGCCAAGGACTCCATCATCAATTCTTTCATCTTCGGCTTTGCCCGCACCGACGCCGTGGTG
GCCCAACGGGCGCGGATTGAATTTTACGGTTACCCCGAGGGATATTTGGAGAACTACCGGGCCAACATCGCCAAGGTCAC
GAAGGACGACGTCCTCCGGGTGGCGCGGAAATACCTGAAGCCCGACCGGATGGTGACTGTCGTGGCCGGTGACGACAAGA
CCTTCGACAAGCCCCTCTCCACCTTTGGCACGGTGGAGGAGATCAAGCTGGAAAACGGAACCGAGAAAGGAGCGAAGTGA

Upstream 100 bases:

>100_bases
CGACGTGATCCGCGTGGCGCGGAAGTATTTCACGCGGGAGAACCGGATCGTGGGCTTCATCACCAAGAAGACAGAGAACT
AAGGGTAACGGGGACAATCC

Downstream 100 bases:

>100_bases
TGGCAACCTGGAAATGCAGCACCTGCGGCTTTACCAAGGAGGGGCGGTGCAAGCCCCAGAAATGTCCCCAATGCCAGGAA
AAGGGGAACTTTGAGAAGCA

Product: peptidase M16-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MIIVKRFALIILVALLPVVAFGAEAKKADPRTMTFPPLVFEVPKTERVVLNNGMVVHMLPDRELPLVSLTAYVNVGSIYE
PADKTGLAGLTGAVMRSGGTRELAPSALDAELEFMASGVESSIGADSGGVSLTCLKRNLPRTLELFAQVMMAPAFSEDRV
ALAKKRTIEALRRQNDDSKEIADREFQKAVYPNHPLGRVPTVETVTAITRDDMVAFHREYFHPNNVILAVAGDFDKKEMI
ALLEKTFAGWKREEIAFPSVPEPAREVKPVVLLARKAVPQSAIRMGHPGIDKNNPDLYAIRVMDYILGGGFTSRLMTEIR
SNEGLAYNVHASFDIGRRFIGTFEAETETKSETTAKAIGLMRAIIAGMTKEPVTDAELTLAKDSIINSFIFGFARTDAVV
AQRARIEFYGYPEGYLENYRANIAKVTKDDVLRVARKYLKPDRMVTVVAGDDKTFDKPLSTFGTVEEIKLENGTEKGAK

Sequences:

>Translated_479_residues
MIIVKRFALIILVALLPVVAFGAEAKKADPRTMTFPPLVFEVPKTERVVLNNGMVVHMLPDRELPLVSLTAYVNVGSIYE
PADKTGLAGLTGAVMRSGGTRELAPSALDAELEFMASGVESSIGADSGGVSLTCLKRNLPRTLELFAQVMMAPAFSEDRV
ALAKKRTIEALRRQNDDSKEIADREFQKAVYPNHPLGRVPTVETVTAITRDDMVAFHREYFHPNNVILAVAGDFDKKEMI
ALLEKTFAGWKREEIAFPSVPEPAREVKPVVLLARKAVPQSAIRMGHPGIDKNNPDLYAIRVMDYILGGGFTSRLMTEIR
SNEGLAYNVHASFDIGRRFIGTFEAETETKSETTAKAIGLMRAIIAGMTKEPVTDAELTLAKDSIINSFIFGFARTDAVV
AQRARIEFYGYPEGYLENYRANIAKVTKDDVLRVARKYLKPDRMVTVVAGDDKTFDKPLSTFGTVEEIKLENGTEKGAK
>Mature_479_residues
MIIVKRFALIILVALLPVVAFGAEAKKADPRTMTFPPLVFEVPKTERVVLNNGMVVHMLPDRELPLVSLTAYVNVGSIYE
PADKTGLAGLTGAVMRSGGTRELAPSALDAELEFMASGVESSIGADSGGVSLTCLKRNLPRTLELFAQVMMAPAFSEDRV
ALAKKRTIEALRRQNDDSKEIADREFQKAVYPNHPLGRVPTVETVTAITRDDMVAFHREYFHPNNVILAVAGDFDKKEMI
ALLEKTFAGWKREEIAFPSVPEPAREVKPVVLLARKAVPQSAIRMGHPGIDKNNPDLYAIRVMDYILGGGFTSRLMTEIR
SNEGLAYNVHASFDIGRRFIGTFEAETETKSETTAKAIGLMRAIIAGMTKEPVTDAELTLAKDSIINSFIFGFARTDAVV
AQRARIEFYGYPEGYLENYRANIAKVTKDDVLRVARKYLKPDRMVTVVAGDDKTFDKPLSTFGTVEEIKLENGTEKGAK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI46593007, Length=282, Percent_Identity=21.2765957446809, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 52762; Mature: 52762

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVKRFALIILVALLPVVAFGAEAKKADPRTMTFPPLVFEVPKTERVVLNNGMVVHMLP
CEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCCCEEEEECCEEEEECC
DRELPLVSLTAYVNVGSIYEPADKTGLAGLTGAVMRSGGTRELAPSALDAELEFMASGVE
CCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH
SSIGADSGGVSLTCLKRNLPRTLELFAQVMMAPAFSEDRVALAKKRTIEALRRQNDDSKE
HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
IADREFQKAVYPNHPLGRVPTVETVTAITRDDMVAFHREYFHPNNVILAVAGDFDKKEMI
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH
ALLEKTFAGWKREEIAFPSVPEPAREVKPVVLLARKAVPQSAIRMGHPGIDKNNPDLYAI
HHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEH
RVMDYILGGGFTSRLMTEIRSNEGLAYNVHASFDIGRRFIGTFEAETETKSETTAKAIGL
HHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
MRAIIAGMTKEPVTDAELTLAKDSIINSFIFGFARTDAVVAQRARIEFYGYPEGYLENYR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH
ANIAKVTKDDVLRVARKYLKPDRMVTVVAGDDKTFDKPLSTFGTVEEIKLENGTEKGAK
HHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCHHEEEECCCCCCCCC
>Mature Secondary Structure
MIIVKRFALIILVALLPVVAFGAEAKKADPRTMTFPPLVFEVPKTERVVLNNGMVVHMLP
CEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCCCEEEEECCEEEEECC
DRELPLVSLTAYVNVGSIYEPADKTGLAGLTGAVMRSGGTRELAPSALDAELEFMASGVE
CCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH
SSIGADSGGVSLTCLKRNLPRTLELFAQVMMAPAFSEDRVALAKKRTIEALRRQNDDSKE
HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
IADREFQKAVYPNHPLGRVPTVETVTAITRDDMVAFHREYFHPNNVILAVAGDFDKKEMI
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH
ALLEKTFAGWKREEIAFPSVPEPAREVKPVVLLARKAVPQSAIRMGHPGIDKNNPDLYAI
HHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEH
RVMDYILGGGFTSRLMTEIRSNEGLAYNVHASFDIGRRFIGTFEAETETKSETTAKAIGL
HHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
MRAIIAGMTKEPVTDAELTLAKDSIINSFIFGFARTDAVVAQRARIEFYGYPEGYLENYR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH
ANIAKVTKDDVLRVARKYLKPDRMVTVVAGDDKTFDKPLSTFGTVEEIKLENGTEKGAK
HHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]