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The map label for this gene is yafK [C]

Identifier: 78223705

GI number: 78223705

Start: 2844932

End: 2845459

Strand: Direct

Name: yafK [C]

Synonym: Gmet_2505

Alternate gene names: 78223705

Gene position: 2844932-2845459 (Clockwise)

Preceding gene: 78223704

Following gene: 78223708

Centisome position: 71.17

GC content: 61.93

Gene sequence:

>528_bases
ATGCGAATCAGATTGCTCAGACTCTGCGCGGCTGCCCTGCTCGGCATCCTGGCAGCCGCTCCGGACGGCCGGTGTCGACA
AGACCCGGACCTGGCTTCGCCTCCCACCGTTGACAGGGTGGTAGTCTACAAATCGAAGCGGCTGCTGGAGCTGCGCAGCG
GCCAGAACCTGATCCGATCCTACCGGGTGGCACTGGGAAGAAACCCCGTCGGCCCCAAGGTAAGAGCCGGTGACTTCCGG
ACTCCCGAAGGAATCTACCGGCTCGACCGCCGTTCCCTCCAGAGCCGGTTCTTCCGATCGATCCACATCTCCTACCCCAA
TACCGAAGACATCGCCACGGCCCGGAAACAGGGAGTTTCTGCCGGAGGGGACATCATGATCCATGGTCTCCCGACCGGAT
TCGAGGACCTGGGCCCGTCTCACGCCTCCTTTGATTGGACCAAGGGGTGCATCGCCGTCACCAACGCCGAGATGACGGAA
ATTTGGCACCTGGTGCGAAACGGCACCCCGATCGAAATACTGCCTTGA

Upstream 100 bases:

>100_bases
CGATGATGAACTGAGTCACCCCTCCATTCAATCTTGTACGGTTGTACGGCCATATCAGGCTGAAAGGTGAGGCACGGAAC
TTGCTGAGTCATCTCCTGAT

Downstream 100 bases:

>100_bases
CCGCGAAAAAGAAGGATTGACCGGCGTCCCCTACGGGGCAACAGCAAGCGCCACCCACCAGGAGAACACCACCCCCACGG
CACTGGCAATTGCCAGCACC

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRIRLLRLCAAALLGILAAAPDGRCRQDPDLASPPTVDRVVVYKSKRLLELRSGQNLIRSYRVALGRNPVGPKVRAGDFR
TPEGIYRLDRRSLQSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGPSHASFDWTKGCIAVTNAEMTE
IWHLVRNGTPIEILP

Sequences:

>Translated_175_residues
MRIRLLRLCAAALLGILAAAPDGRCRQDPDLASPPTVDRVVVYKSKRLLELRSGQNLIRSYRVALGRNPVGPKVRAGDFR
TPEGIYRLDRRSLQSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGPSHASFDWTKGCIAVTNAEMTE
IWHLVRNGTPIEILP
>Mature_175_residues
MRIRLLRLCAAALLGILAAAPDGRCRQDPDLASPPTVDRVVVYKSKRLLELRSGQNLIRSYRVALGRNPVGPKVRAGDFR
TPEGIYRLDRRSLQSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGPSHASFDWTKGCIAVTNAEMTE
IWHLVRNGTPIEILP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786418, Length=162, Percent_Identity=30.2469135802469, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19388; Mature: 19388

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRLLRLCAAALLGILAAAPDGRCRQDPDLASPPTVDRVVVYKSKRLLELRSGQNLIRS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHH
YRVALGRNPVGPKVRAGDFRTPEGIYRLDRRSLQSRFFRSIHISYPNTEDIATARKQGVS
HHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCC
AGGDIMIHGLPTGFEDLGPSHASFDWTKGCIAVTNAEMTEIWHLVRNGTPIEILP
CCCCEEEEECCCCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MRIRLLRLCAAALLGILAAAPDGRCRQDPDLASPPTVDRVVVYKSKRLLELRSGQNLIRS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHH
YRVALGRNPVGPKVRAGDFRTPEGIYRLDRRSLQSRFFRSIHISYPNTEDIATARKQGVS
HHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCC
AGGDIMIHGLPTGFEDLGPSHASFDWTKGCIAVTNAEMTEIWHLVRNGTPIEILP
CCCCEEEEECCCCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA