| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223689
Identifier: 78223689
GI number: 78223689
Start: 2829240
End: 2830196
Strand: Reverse
Name: 78223689
Synonym: Gmet_2486
Alternate gene names: NA
Gene position: 2830196-2829240 (Counterclockwise)
Preceding gene: 78223691
Following gene: 78223688
Centisome position: 70.8
GC content: 40.75
Gene sequence:
>957_bases ATGATAAAATATTCAGGATATGAGGTGGCCATATATATGAGTCGTCTAATACATTCAAACTCAGGGCATATTCGTTCAAT GCAGATTTCCAATACTCAACTTTTCATTTTTGTCGAAGGGAAGCAGAGTGATCCGTATTTTTTTGCTAAAGTCTGTAAAG CTTCACTACCCGATAGTATTGAATTTGAGATTTCGACAGCCCAACAAATTTCTGGAGGAGCCGGTGGCAAAGAAGCGTTG ATTTCTTATTTTAGGTGCCTCCGTCGAAAAAGTGCGCTCATATCTTTTTTCGAAGGCAAAAGAACGGCTTGTATTTTCAT TTTAGACAAGGATATTGACGATATAAAGCGCAAGCAACTACGATCAACACACGTCATATATACACAGTATTATGATGTTC AAAATTACATATTTGAGCATGGCGATCTTGTTACTGGAGTTGCGGCAGCTGCCTCGATTGATCCTCGTAAGCTTCATGGT GTGCTTGGAAATTCATCTGAATGGTGCAGAAGGGTTTCTCACTTATGGCGTGACTGGATTGCATTGTGTTTCCGTCTCAT TGAAGATGGAATCCGTGGTGAAGCAAACTATGGAGCACCTTCACGAATTCAGACACGTAATTGTGGTATGACAGACACGA TTGCACTTGAATCCCTTGTCCGCACACTTGCGCAACGTACAAACATATCTTTCGATGAAATGATGAGGAAAGTGGAATTG TCGAATAAGAAGATTGATAGATATTTCAAAACAGGTCAACATCATAGAATTTTTAAGGGGAAATGGTTTTCATTGATTCT TGCAGATGAAGTTGAGCGTATCATGACGGGTCAACCACACGATTGCAACGGATTGGCTGGGCGACTCCCTTCAACTGTTG CTGCCACGATAAATTTTAACGACCCTTGGATCGAGTATTTCAAACACCGATTGTGTGCTGTAGCAGCAATGCTATAA
Upstream 100 bases:
>100_bases GATTGGCAAAAAGACTTGGTTAGTTCAATACGAGCACTTAATGCTGATGCACAGTTAATATTTGCTACACATTCGCCTGA AATAATGGCTGATATTTCTG
Downstream 100 bases:
>100_bases AATGTCCAACCCGCGCTCAGACCTTGACCGGGCATGAATACGTCCGGCAGATCAAGCGCAGCCCCGTTGAGCAAGAATAG AAGAACCAAACACTAAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MIKYSGYEVAIYMSRLIHSNSGHIRSMQISNTQLFIFVEGKQSDPYFFAKVCKASLPDSIEFEISTAQQISGGAGGKEAL ISYFRCLRRKSALISFFEGKRTACIFILDKDIDDIKRKQLRSTHVIYTQYYDVQNYIFEHGDLVTGVAAAASIDPRKLHG VLGNSSEWCRRVSHLWRDWIALCFRLIEDGIRGEANYGAPSRIQTRNCGMTDTIALESLVRTLAQRTNISFDEMMRKVEL SNKKIDRYFKTGQHHRIFKGKWFSLILADEVERIMTGQPHDCNGLAGRLPSTVAATINFNDPWIEYFKHRLCAVAAML
Sequences:
>Translated_318_residues MIKYSGYEVAIYMSRLIHSNSGHIRSMQISNTQLFIFVEGKQSDPYFFAKVCKASLPDSIEFEISTAQQISGGAGGKEAL ISYFRCLRRKSALISFFEGKRTACIFILDKDIDDIKRKQLRSTHVIYTQYYDVQNYIFEHGDLVTGVAAAASIDPRKLHG VLGNSSEWCRRVSHLWRDWIALCFRLIEDGIRGEANYGAPSRIQTRNCGMTDTIALESLVRTLAQRTNISFDEMMRKVEL SNKKIDRYFKTGQHHRIFKGKWFSLILADEVERIMTGQPHDCNGLAGRLPSTVAATINFNDPWIEYFKHRLCAVAAML >Mature_318_residues MIKYSGYEVAIYMSRLIHSNSGHIRSMQISNTQLFIFVEGKQSDPYFFAKVCKASLPDSIEFEISTAQQISGGAGGKEAL ISYFRCLRRKSALISFFEGKRTACIFILDKDIDDIKRKQLRSTHVIYTQYYDVQNYIFEHGDLVTGVAAAASIDPRKLHG VLGNSSEWCRRVSHLWRDWIALCFRLIEDGIRGEANYGAPSRIQTRNCGMTDTIALESLVRTLAQRTNISFDEMMRKVEL SNKKIDRYFKTGQHHRIFKGKWFSLILADEVERIMTGQPHDCNGLAGRLPSTVAATINFNDPWIEYFKHRLCAVAAML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36302; Mature: 36302
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKYSGYEVAIYMSRLIHSNSGHIRSMQISNTQLFIFVEGKQSDPYFFAKVCKASLPDSI CCEECCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCCHHHHHHHHHCCCCCE EFEISTAQQISGGAGGKEALISYFRCLRRKSALISFFEGKRTACIFILDKDIDDIKRKQL EEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHH RSTHVIYTQYYDVQNYIFEHGDLVTGVAAAASIDPRKLHGVLGNSSEWCRRVSHLWRDWI HCCEEEEEEEECHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH ALCFRLIEDGIRGEANYGAPSRIQTRNCGMTDTIALESLVRTLAQRTNISFDEMMRKVEL HHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SNKKIDRYFKTGQHHRIFKGKWFSLILADEVERIMTGQPHDCNGLAGRLPSTVAATINFN CCHHHHHHHHCCCCCEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC DPWIEYFKHRLCAVAAML CHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKYSGYEVAIYMSRLIHSNSGHIRSMQISNTQLFIFVEGKQSDPYFFAKVCKASLPDSI CCEECCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCCHHHHHHHHHCCCCCE EFEISTAQQISGGAGGKEALISYFRCLRRKSALISFFEGKRTACIFILDKDIDDIKRKQL EEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHH RSTHVIYTQYYDVQNYIFEHGDLVTGVAAAASIDPRKLHGVLGNSSEWCRRVSHLWRDWI HCCEEEEEEEECHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH ALCFRLIEDGIRGEANYGAPSRIQTRNCGMTDTIALESLVRTLAQRTNISFDEMMRKVEL HHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SNKKIDRYFKTGQHHRIFKGKWFSLILADEVERIMTGQPHDCNGLAGRLPSTVAATINFN CCHHHHHHHHCCCCCEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC DPWIEYFKHRLCAVAAML CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA