Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is yedW [C]

Identifier: 78223634

GI number: 78223634

Start: 2752334

End: 2752729

Strand: Reverse

Name: yedW [C]

Synonym: Gmet_2431

Alternate gene names: 78223634

Gene position: 2752729-2752334 (Counterclockwise)

Preceding gene: 78223635

Following gene: 78223633

Centisome position: 68.86

GC content: 56.06

Gene sequence:

>396_bases
ATGAAGACGCTGATTGTCGAGGATGATTTCGTATCCCGCAAAATCATGAAGGAGCTGATCACCCCCTTGGGCGAGTGCGA
TATCGCCATCGACGGTGAGGAAGCCGTGAAGGCCTTTCGGCTTGCCCATGAGGAAAAGCGCCCCTATGACCTGGTCTGCA
TGGATATCATGATGCCCAACCTGGATGGCCACGGCGCCCTGGAACGCATGAGGGAACTTGAGCGGGAAATGGGAATCGCA
TGCGCCAATGAGGTGAGGGTCATCATGACCACAGCCCTCGATGACCCGAAGAACGTCGTTGATGCCTTGTATCGGGGCGG
GGCAACCTCGTATCTGGTGAAGCCCATCACCAGGCAGAAGCTGTTGAAGGAGATTCGAAGCCACGGTCTCGTATAG

Upstream 100 bases:

>100_bases
GTTTTTGCGTTTGAAAATGGGAGGTGCTTATTTCCTCTCAACTATCCGTCCAATCGGCCGATAAGGAATTCTGGGTAACT
TGTGCGTGAAAGGAGCAGGA

Downstream 100 bases:

>100_bases
CCGGCGGCGAGATCAGGAATTTCCTGATACCATAAGCTTTTGTTAAAGATATCCAGTTCTCTGACGATAGTATGAACAGA
TAGCGATTCCGTACAGTTAG

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: Chemotaxis Protein CheY; Response Regulator Receiver; Response Regulator Receiver Domain-Containing Protein; Response Regulator; Response Regulator Receiver Domain Protein; Transcriptional Regulatory Protein; Response Receiver

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPNLDGHGALERMRELEREMGIA
CANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQKLLKEIRSHGLV

Sequences:

>Translated_131_residues
MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPNLDGHGALERMRELEREMGIA
CANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQKLLKEIRSHGLV
>Mature_131_residues
MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPNLDGHGALERMRELEREMGIA
CANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQKLLKEIRSHGLV

Specific function: Probable Member Of A Two-Component Regulatory System Yedw/Yedv. [C]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14816; Mature: 14816

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPN
CCEEEECCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCC
LDGHGALERMRELEREMGIACANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQK
CCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
LLKEIRSHGLV
HHHHHHHCCCC
>Mature Secondary Structure
MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPN
CCEEEECCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCC
LDGHGALERMRELEREMGIACANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQK
CCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
LLKEIRSHGLV
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA