| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yedW [C]
Identifier: 78223634
GI number: 78223634
Start: 2752334
End: 2752729
Strand: Reverse
Name: yedW [C]
Synonym: Gmet_2431
Alternate gene names: 78223634
Gene position: 2752729-2752334 (Counterclockwise)
Preceding gene: 78223635
Following gene: 78223633
Centisome position: 68.86
GC content: 56.06
Gene sequence:
>396_bases ATGAAGACGCTGATTGTCGAGGATGATTTCGTATCCCGCAAAATCATGAAGGAGCTGATCACCCCCTTGGGCGAGTGCGA TATCGCCATCGACGGTGAGGAAGCCGTGAAGGCCTTTCGGCTTGCCCATGAGGAAAAGCGCCCCTATGACCTGGTCTGCA TGGATATCATGATGCCCAACCTGGATGGCCACGGCGCCCTGGAACGCATGAGGGAACTTGAGCGGGAAATGGGAATCGCA TGCGCCAATGAGGTGAGGGTCATCATGACCACAGCCCTCGATGACCCGAAGAACGTCGTTGATGCCTTGTATCGGGGCGG GGCAACCTCGTATCTGGTGAAGCCCATCACCAGGCAGAAGCTGTTGAAGGAGATTCGAAGCCACGGTCTCGTATAG
Upstream 100 bases:
>100_bases GTTTTTGCGTTTGAAAATGGGAGGTGCTTATTTCCTCTCAACTATCCGTCCAATCGGCCGATAAGGAATTCTGGGTAACT TGTGCGTGAAAGGAGCAGGA
Downstream 100 bases:
>100_bases CCGGCGGCGAGATCAGGAATTTCCTGATACCATAAGCTTTTGTTAAAGATATCCAGTTCTCTGACGATAGTATGAACAGA TAGCGATTCCGTACAGTTAG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Chemotaxis Protein CheY; Response Regulator Receiver; Response Regulator Receiver Domain-Containing Protein; Response Regulator; Response Regulator Receiver Domain Protein; Transcriptional Regulatory Protein; Response Receiver
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPNLDGHGALERMRELEREMGIA CANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQKLLKEIRSHGLV
Sequences:
>Translated_131_residues MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPNLDGHGALERMRELEREMGIA CANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQKLLKEIRSHGLV >Mature_131_residues MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPNLDGHGALERMRELEREMGIA CANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQKLLKEIRSHGLV
Specific function: Probable Member Of A Two-Component Regulatory System Yedw/Yedv. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14816; Mature: 14816
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPN CCEEEECCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCC LDGHGALERMRELEREMGIACANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQK CCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH LLKEIRSHGLV HHHHHHHCCCC >Mature Secondary Structure MKTLIVEDDFVSRKIMKELITPLGECDIAIDGEEAVKAFRLAHEEKRPYDLVCMDIMMPN CCEEEECCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCC LDGHGALERMRELEREMGIACANEVRVIMTTALDDPKNVVDALYRGGATSYLVKPITRQK CCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH LLKEIRSHGLV HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA