| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223617
Identifier: 78223617
GI number: 78223617
Start: 2727843
End: 2728223
Strand: Reverse
Name: 78223617
Synonym: Gmet_2414
Alternate gene names: NA
Gene position: 2728223-2727843 (Counterclockwise)
Preceding gene: 78223618
Following gene: 78223615
Centisome position: 68.25
GC content: 61.42
Gene sequence:
>381_bases ATGCTTAAAACGTTTATCATCATGCTTATGGCCGTCTCGGCCGGCACCATCGGCGACATCCTCCTCGCCAAGGGGATGAA GGAGATGGGGGATATCTCGGCCATGAACCTGCGCGGGATCCTCAACGTGGCCATCCAGGCCCTCACTACGCCGAAGCTGA TCATCGGCACCGCCATGCTGGCGATCTTCTTCTTCCTCTGGCTGGCGGTCCTCTCCTGGGAAGACCTCTCCGTGGCCCTC CCCATGCAGGCCCTCAACTACGTCCTCGTGGCGTTCCTCTCCCAATGGTTCCTTGGCGAGACCGTCTCGCCCCTTCGCTG GACCGGCACCATCCTGGTCTGCGTCGGCGTCATGCTCATCACCAAGAGCGGAGCCCAGTGA
Upstream 100 bases:
>100_bases CATGAGGAGGAACTGGCGGCCCTCACGAGCAGCCGGGTGAAGGGGCGCCTGAAAGAGCTGGGCATTGGGCTCAAAAACTA CCGGGGCGAGGTCAAGACGT
Downstream 100 bases:
>100_bases CAGACGGGAATCAGGAAACCGTGTCCAGGGACCGGAAAGAAAAAAAGGGAGCCGTGATTGGCTCCCTTTTTTCATTTGGC AAGGTGCGACGCCTATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MLKTFIIMLMAVSAGTIGDILLAKGMKEMGDISAMNLRGILNVAIQALTTPKLIIGTAMLAIFFFLWLAVLSWEDLSVAL PMQALNYVLVAFLSQWFLGETVSPLRWTGTILVCVGVMLITKSGAQ
Sequences:
>Translated_126_residues MLKTFIIMLMAVSAGTIGDILLAKGMKEMGDISAMNLRGILNVAIQALTTPKLIIGTAMLAIFFFLWLAVLSWEDLSVAL PMQALNYVLVAFLSQWFLGETVSPLRWTGTILVCVGVMLITKSGAQ >Mature_126_residues MLKTFIIMLMAVSAGTIGDILLAKGMKEMGDISAMNLRGILNVAIQALTTPKLIIGTAMLAIFFFLWLAVLSWEDLSVAL PMQALNYVLVAFLSQWFLGETVSPLRWTGTILVCVGVMLITKSGAQ
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13665; Mature: 13665
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTFIIMLMAVSAGTIGDILLAKGMKEMGDISAMNLRGILNVAIQALTTPKLIIGTAML CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIFFFLWLAVLSWEDLSVALPMQALNYVLVAFLSQWFLGETVSPLRWTGTILVCVGVMLI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TKSGAQ HCCCCC >Mature Secondary Structure MLKTFIIMLMAVSAGTIGDILLAKGMKEMGDISAMNLRGILNVAIQALTTPKLIIGTAML CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIFFFLWLAVLSWEDLSVALPMQALNYVLVAFLSQWFLGETVSPLRWTGTILVCVGVMLI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TKSGAQ HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA