| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223591
Identifier: 78223591
GI number: 78223591
Start: 2698613
End: 2699101
Strand: Direct
Name: 78223591
Synonym: Gmet_2388
Alternate gene names: NA
Gene position: 2698613-2699101 (Clockwise)
Preceding gene: 78223590
Following gene: 78223595
Centisome position: 67.51
GC content: 58.69
Gene sequence:
>489_bases ATGAGCCTTGAAATCAACGCCATCGCAATCGACATTCCCGACGACTGCAACCTCATCCTCGGCCAAACTCACTTTATCAA GACCGCCGAGGACCTGTACGAGATTATCGCCACCACTGTCTCCCTGGCGCGGTTCGGCATCGCCTTTACTGAAGCGTCGG GGCCGTGCCTCATCCGCACCGAGGGTAACGACGATGAATTGACCCAGGCCTGCGTGCGCAACCTCCAGGCAATCGGAGCG GGCCACGTTTTCTGCATCCTGCTGCGCGACGCCTATCCCATCAACATCCTGAACCAGATCAAGAACTGTCCCGAAGTGTG CAGTATCTACTGCGCAACCGCCAACCCTCTCCAGGTGATAGTCGCTTCAACGGCCCAGGGGTCAGGGGTGCTCGGCGTCA TCGACGGATTCCCTCCCAAAGGGGTCGAGTCGGACGATGACCGGCAGAAACGACGCGATTTCCTGCGTGCCATAGGGTAC AAACGCTAG
Upstream 100 bases:
>100_bases ATACCATCCCCACCGACGTTGAGCAGTGCCCTTACTGCATGCACAGTTGGCCCGGCGAGAAAGAGTAACCGTCTATCCCT CTACCAGAGGGGAATGACCC
Downstream 100 bases:
>100_bases GGATTGGGCCAAACTCTCAACGTTACAAGGGACATCCGCGGATATCGCGTGGTGTCCCTTTTTTTATCCTTCTACCGATC AACCTTACCGATGAACTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSLEINAIAIDIPDDCNLILGQTHFIKTAEDLYEIIATTVSLARFGIAFTEASGPCLIRTEGNDDELTQACVRNLQAIGA GHVFCILLRDAYPINILNQIKNCPEVCSIYCATANPLQVIVASTAQGSGVLGVIDGFPPKGVESDDDRQKRRDFLRAIGY KR
Sequences:
>Translated_162_residues MSLEINAIAIDIPDDCNLILGQTHFIKTAEDLYEIIATTVSLARFGIAFTEASGPCLIRTEGNDDELTQACVRNLQAIGA GHVFCILLRDAYPINILNQIKNCPEVCSIYCATANPLQVIVASTAQGSGVLGVIDGFPPKGVESDDDRQKRRDFLRAIGY KR >Mature_161_residues SLEINAIAIDIPDDCNLILGQTHFIKTAEDLYEIIATTVSLARFGIAFTEASGPCLIRTEGNDDELTQACVRNLQAIGAG HVFCILLRDAYPINILNQIKNCPEVCSIYCATANPLQVIVASTAQGSGVLGVIDGFPPKGVESDDDRQKRRDFLRAIGYK R
Specific function: Unknown
COG id: COG1839
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17599; Mature: 17468
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEINAIAIDIPDDCNLILGQTHFIKTAEDLYEIIATTVSLARFGIAFTEASGPCLIRT CCEEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEE EGNDDELTQACVRNLQAIGAGHVFCILLRDAYPINILNQIKNCPEVCSIYCATANPLQVI CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCHHHHEEEECCCCCEEEE VASTAQGSGVLGVIDGFPPKGVESDDDRQKRRDFLRAIGYKR EEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SLEINAIAIDIPDDCNLILGQTHFIKTAEDLYEIIATTVSLARFGIAFTEASGPCLIRT CEEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEE EGNDDELTQACVRNLQAIGAGHVFCILLRDAYPINILNQIKNCPEVCSIYCATANPLQVI CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCHHHHEEEECCCCCEEEE VASTAQGSGVLGVIDGFPPKGVESDDDRQKRRDFLRAIGYKR EEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA