| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is gluP [H]
Identifier: 78223588
GI number: 78223588
Start: 2695691
End: 2696542
Strand: Reverse
Name: gluP [H]
Synonym: Gmet_2385
Alternate gene names: 78223588
Gene position: 2696542-2695691 (Counterclockwise)
Preceding gene: 78223592
Following gene: 78223586
Centisome position: 67.46
GC content: 63.03
Gene sequence:
>852_bases ATGACAACTCCCGAGCGCCGCTCGATCCTCTGCCCAAACTGCGGCAGGCTCATCAGTCGCGACGAGCCTTCTTGCCCCTG GTGCGGCACCTCCCATCCCGGTTCGTGGCTGAAGAACAACCCCCTCACCCGGAGCGTGGGGAGCGCCGACCAGCTCGTCA CCATCATCATCACGGTTAACATGGTGATGTACCTCGTGTCGCTGCTGATCAGCAATCACTCTCCCGGCCACGGGGGACTC TTCTCTGCGCTCTCGCCCGATCAGGGGAGCCTCTTGGCCCTAGGGGCCACTGGCGTTGTCCCCATCGATCGCTACGGCCG TTTCTGGTCGCTCCTTTCCGCCAACTACCTCCATGGGGGGCCGCTCCACATCTTCTTCAACATGATGGCCCTGCGCCAGC TTCTGCCGCTGGTGGCCCAGGAGTACGGTACCTCGCGGATGCTCACCATCTATACCCTCGGAGGAGTTTGCGGCTACGTG CTGTCATACCTGGCGGGGGTCGGTTACACCATCGGCGCTTCAGCGGCCCTCTGCGGCCTCATTGGCTCCCTGCTTTACTA CGGCAAGAGCCGGGGCGGGGTCTACGGGCAGGCGGTCTTCAAGGAAGTATGGGGTTGGGTGGTGGGGCTTTTCTTCTTTG GCCTCATCGTGCCAGGGATCAATAACTGGGGGCACGGCGGCGGCGTTGTGGGGGGGATCGTCCTGGGGTTCCTGCTTGGT TACCGGGAGCGGCGGGCTGAGAATCTCTTCCACAAGTTCCTGGCCGGAGGGTGCATCCTGGCGACGGCCGTAGCGCTGGC TCTGGGGCTCCTTTCGGCCTTTATCACGTTTGCGGGGAGATCTTTGCACTGA
Upstream 100 bases:
>100_bases ATATCGTGAGGTTTCTTGCACCGGCAAGCTCTCCGCGGTAGGATGCAGAAACGTCTGAGACATATCGACGAGCCGATAGC CATTCTACCATGAGGTCACC
Downstream 100 bases:
>100_bases ACCGCGCGTGTTCCTTACCCCCGTAGCTGTCTTCTGTCAATTCACTAACCGCCACTGCCGGGCATCGAGAAACTCCTCCA GTTCCCGGCGTCCGGCGGTG
Product: rhomboid-like protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTTPERRSILCPNCGRLISRDEPSCPWCGTSHPGSWLKNNPLTRSVGSADQLVTIIITVNMVMYLVSLLISNHSPGHGGL FSALSPDQGSLLALGATGVVPIDRYGRFWSLLSANYLHGGPLHIFFNMMALRQLLPLVAQEYGTSRMLTIYTLGGVCGYV LSYLAGVGYTIGASAALCGLIGSLLYYGKSRGGVYGQAVFKEVWGWVVGLFFFGLIVPGINNWGHGGGVVGGIVLGFLLG YRERRAENLFHKFLAGGCILATAVALALGLLSAFITFAGRSLH
Sequences:
>Translated_283_residues MTTPERRSILCPNCGRLISRDEPSCPWCGTSHPGSWLKNNPLTRSVGSADQLVTIIITVNMVMYLVSLLISNHSPGHGGL FSALSPDQGSLLALGATGVVPIDRYGRFWSLLSANYLHGGPLHIFFNMMALRQLLPLVAQEYGTSRMLTIYTLGGVCGYV LSYLAGVGYTIGASAALCGLIGSLLYYGKSRGGVYGQAVFKEVWGWVVGLFFFGLIVPGINNWGHGGGVVGGIVLGFLLG YRERRAENLFHKFLAGGCILATAVALALGLLSAFITFAGRSLH >Mature_282_residues TTPERRSILCPNCGRLISRDEPSCPWCGTSHPGSWLKNNPLTRSVGSADQLVTIIITVNMVMYLVSLLISNHSPGHGGLF SALSPDQGSLLALGATGVVPIDRYGRFWSLLSANYLHGGPLHIFFNMMALRQLLPLVAQEYGTSRMLTIYTLGGVCGYVL SYLAGVGYTIGASAALCGLIGSLLYYGKSRGGVYGQAVFKEVWGWVVGLFFFGLIVPGINNWGHGGGVVGGIVLGFLLGY RERRAENLFHKFLAGGCILATAVALALGLLSAFITFAGRSLH
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 30188; Mature: 30057
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPERRSILCPNCGRLISRDEPSCPWCGTSHPGSWLKNNPLTRSVGSADQLVTIIITVN CCCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MVMYLVSLLISNHSPGHGGLFSALSPDQGSLLALGATGVVPIDRYGRFWSLLSANYLHGG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCC PLHIFFNMMALRQLLPLVAQEYGTSRMLTIYTLGGVCGYVLSYLAGVGYTIGASAALCGL HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IGSLLYYGKSRGGVYGQAVFKEVWGWVVGLFFFGLIVPGINNWGHGGGVVGGIVLGFLLG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YRERRAENLFHKFLAGGCILATAVALALGLLSAFITFAGRSLH HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTPERRSILCPNCGRLISRDEPSCPWCGTSHPGSWLKNNPLTRSVGSADQLVTIIITVN CCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MVMYLVSLLISNHSPGHGGLFSALSPDQGSLLALGATGVVPIDRYGRFWSLLSANYLHGG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCC PLHIFFNMMALRQLLPLVAQEYGTSRMLTIYTLGGVCGYVLSYLAGVGYTIGASAALCGL HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IGSLLYYGKSRGGVYGQAVFKEVWGWVVGLFFFGLIVPGINNWGHGGGVVGGIVLGFLLG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YRERRAENLFHKFLAGGCILATAVALALGLLSAFITFAGRSLH HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]