| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is metG [H]
Identifier: 78223524
GI number: 78223524
Start: 2629251
End: 2630780
Strand: Direct
Name: metG [H]
Synonym: Gmet_2321
Alternate gene names: 78223524
Gene position: 2629251-2630780 (Clockwise)
Preceding gene: 78223523
Following gene: 78223526
Centisome position: 65.77
GC content: 61.18
Gene sequence:
>1530_bases ATGAGCCGAACGTTCTATGTCACGACCCCCATCTACTACGTAAATGACGTACCGCACATCGGCCATGCGTACACGACCCT CGCCGCCGATGTCCTTGCCCGCTACAAGCGGCTCAAGGGGTATGATGTCTTTTTCCTGACCGGGACCGACGAGCACGGCC AGAAGGTGGAGAAGGCCGCCAACGCCGCCGGCGAGACCCCCCTGGAGCTGGCCGATCGGGTGGTGAAGCGTTTCCAGGCC CTCTGGGAAAAACTTGACATCAGCTACAACGACTTCATCCGCACCACCCAGGAGCGCCACAAGAAGGGGGTAACCCACCT CTTCCGGGAGGTCATGGCCAAGGGGGACATCTATCTCGGCGAGTATGAGGACTGGTACTGCACCCCGTGCGAAACCTTCT GGACCGAAACCCAGCTCATCGACGGCAAATGCCCCGACTGCAACCGTCCCGTGGAAAAGCTCAAGGAAGAGTCCTACTTC TTCCGGATGAGCAAGTACCAGGAGCAGCTCCTGGCCCACATCGAAGCGAACCCCGACTTCATCCAGCCCAAGAGCCGGCG CAACGAAATTATCTCTTTCGTCAAGGAAGGGCTCCGGGATCTCTCGGTTTCCCGCACCTCCTTCAACTGGGGGATTCCGG TACCGGGGAACGAGCGGCACGTGATCTACGTCTGGTTCGACGCCCTCACCAACTACATCACAGCCCTCGGCTATCCCGAC CAGGCCGGTAATTACGGGAAATTCTGGCCCGTGGACGCCCACCTCATCGGCAAGGATATCCTCCGCTTCCACGCGGTCTA CTGGCCCACCTTCCTCATGGCCGCCGGACTTCCGGTGCCGAGGAAAGTATTTGCCCACGGCTGGTGGACCGTCGAAGGGC AGAAGATGAGCAAGAGCCTCCAGAATGTGGTGGAGCCCAACATGCTCGTGGACAAGTACGGCATCGACGCGGTCCGCTAC TTCCTCCTGCGGGAGGTCCCCTTCGGCCTCGACGGCGACTTCTCCCACGCGGCCCTCGTCCACCGGATCAACTCGGACCT GGCCAACGACCTGGGGAACCTCCTCAGCCGCTCTACCGCCATGGTGAACAAGTACTTCGGCGGCACCCTCCCCCAGCCGG GAGCCATGACCGAACTGGACGCCGCCTTCCGGGCCAGGACCGAGGCGATGATCAGCCAACTCGAGTCATGCATGGACGAA ATGGCCTTCAGTAAGGGCCTCCAGGCAATCTGGGAAGTGATCTCCGCCGGAAACAAATACATCGACGAGAGCGCCCCCTG GACCCTGGCCAAGGATCCGGCCCAGAAGGAGCGTCTCGGCACCATCATGTACACCCTCTTGGAGGCCCAGCGGATCGTGC ATACGCTCTTGTCTGCCTTCATGCCGCGCACCGCGGCCAAAGCCCTCGGCTATCTGGGCTGCATGGAGGCACTCAGGGAC GAAGACCTGGCGTGGGGCAAACTGGTTCCGGGAACACAGATTGCCAAGGCAGAGGCGCTTTTCCCGCGAATCGAAGACAA AGCCGAATAG
Upstream 100 bases:
>100_bases AGCGCGATACTAAAAAGAACCAGGACCAGCAGCGCGGAGAACGCGGCAACCGTGATCGACGCGGCGGCAAAGGCAGGGAC AAGGATAAAAAGGAGCCGAA
Downstream 100 bases:
>100_bases GTACAATGAGGGGCGCTGCTTGCTGCGCCCGTATTGCTGCCCCCATGGAGCAAGCGCAGACCCTACGGTCCCGCAGGTGG TCTCAGTTCTCCAGAGGCGA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAANAAGETPLELADRVVKRFQA LWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLGEYEDWYCTPCETFWTETQLIDGKCPDCNRPVEKLKEESYF FRMSKYQEQLLAHIEANPDFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGYPD QAGNYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMSKSLQNVVEPNMLVDKYGIDAVRY FLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSRSTAMVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDE MAFSKGLQAIWEVISAGNKYIDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEALRD EDLAWGKLVPGTQIAKAEALFPRIEDKAE
Sequences:
>Translated_509_residues MSRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAANAAGETPLELADRVVKRFQA LWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLGEYEDWYCTPCETFWTETQLIDGKCPDCNRPVEKLKEESYF FRMSKYQEQLLAHIEANPDFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGYPD QAGNYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMSKSLQNVVEPNMLVDKYGIDAVRY FLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSRSTAMVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDE MAFSKGLQAIWEVISAGNKYIDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEALRD EDLAWGKLVPGTQIAKAEALFPRIEDKAE >Mature_508_residues SRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAANAAGETPLELADRVVKRFQAL WEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLGEYEDWYCTPCETFWTETQLIDGKCPDCNRPVEKLKEESYFF RMSKYQEQLLAHIEANPDFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGYPDQ AGNYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMSKSLQNVVEPNMLVDKYGIDAVRYF LLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSRSTAMVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDEM AFSKGLQAIWEVISAGNKYIDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEALRDE DLAWGKLVPGTQIAKAEALFPRIEDKAE
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=504, Percent_Identity=39.8809523809524, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI14043022, Length=556, Percent_Identity=26.978417266187, Blast_Score=182, Evalue=7e-46, Organism=Escherichia coli, GI1788432, Length=548, Percent_Identity=25.5474452554745, Blast_Score=200, Evalue=2e-52, Organism=Caenorhabditis elegans, GI212645096, Length=521, Percent_Identity=35.700575815739, Blast_Score=306, Evalue=2e-83, Organism=Caenorhabditis elegans, GI71992781, Length=415, Percent_Identity=32.7710843373494, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17540794, Length=512, Percent_Identity=28.515625, Blast_Score=180, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321610, Length=533, Percent_Identity=34.3339587242026, Blast_Score=303, Evalue=5e-83, Organism=Saccharomyces cerevisiae, GI6321704, Length=556, Percent_Identity=26.4388489208633, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI21358483, Length=498, Percent_Identity=37.9518072289157, Blast_Score=333, Evalue=1e-91, Organism=Drosophila melanogaster, GI24655311, Length=554, Percent_Identity=28.8808664259928, Blast_Score=193, Evalue=3e-49,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 57925; Mature: 57794
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAA CCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH NAAGETPLELADRVVKRFQALWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLG HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC EYEDWYCTPCETFWTETQLIDGKCPDCNRPVEKLKEESYFFRMSKYQEQLLAHIEANPDF CCCCCEECCHHHHHCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGYPD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCC QAGNYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMSKSL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECHHHHHHHH QNVVEPNMLVDKYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSRSTA HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDEMAFSKGLQAIWEVISAGNKY HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEALRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC EDLAWGKLVPGTQIAKAEALFPRIEDKAE CCCCCCCCCCCCHHHHHHHHHCCHHCCCC >Mature Secondary Structure SRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAA CCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH NAAGETPLELADRVVKRFQALWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLG HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC EYEDWYCTPCETFWTETQLIDGKCPDCNRPVEKLKEESYFFRMSKYQEQLLAHIEANPDF CCCCCEECCHHHHHCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGYPD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCC QAGNYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMSKSL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECHHHHHHHH QNVVEPNMLVDKYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSRSTA HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDEMAFSKGLQAIWEVISAGNKY HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEALRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC EDLAWGKLVPGTQIAKAEALFPRIEDKAE CCCCCCCCCCCCHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]