| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is senX3 [H]
Identifier: 78223490
GI number: 78223490
Start: 2592155
End: 2593318
Strand: Direct
Name: senX3 [H]
Synonym: Gmet_2287
Alternate gene names: 78223490
Gene position: 2592155-2593318 (Clockwise)
Preceding gene: 78223487
Following gene: 78223500
Centisome position: 64.85
GC content: 59.54
Gene sequence:
>1164_bases ATGACCAAGGCTGCACCGAAAGACATTGCCGCGACTTTCTTCGCCGCTGCCGAACGGGCATCCCGCACGGAAGTCGAGGA AGTGCGCAAACAAGTCCTCCTCGACACCACCCTCACGTCGCTGATCGACGCCATACCCGACTATGCCCTCGTCCTCAACC AGGAACGACAGGTTGTTGCGGCCAACCGTCATCTGCTGGACGCCTTCGGGTTGGGCATCGCCTCCATCATCGGCAAGCGT CCTGGCGAGACTTTCGGCTGCATCTTCTCCTCGGAGGGGCCGGCGGGTTGCGGCACCGGCAATCACTGTTCCGTCTGCGG TGCGGTCATGTCGATCCTCGAAAGCCAGGAAACCCTCATCCAGAACTGCCATGAGTGCCATATTAGCCTCAACCGGAACG ACATAACATCCATGGACCTTGAGGTGTGCTCAACTCCCGCCACGGTCAATGGCATCCCGGTCACCGTTTGCGTCATGCGC GACATCAGCGACCAGAAGCGTCGAAGCGTCCTCGAGCGGGTCTTTTTCCATGACGTGATCAACACCGTCGGCGGCATTCA CGGCATTGCCGCCATGCTCATGGAACACCCGGATCTCCCCCCTGAAAAGGAACTCGAATATAAGGAGTGGATGGTCCTCC TGTCGAACCGACTTATCGACGAGATCAACCACCAGCGCAAGCTCCTTGACGCCGAAAGGGGGGAATTCAGACCAGACCTT GGGATGGTGCGCGTGCCGGATCTGGTGCGGGAGGTCCATGCCCTCTATGTGACCCACGATATCGCAGCGGGACGCCACCT GGTCATGGGAGAGATCGCTGACTGCTCCATCGAAAGCGATGGGCAGATCCTGCACCGCATCCTCGGAAACCTTGTAAAAA ATGCCCTGGAGGCGACGCCACAGGAGGGAACCGTTACCCTTTCCTGCTCCGAAGACGCCGAGCGGGTCACCTTTGCCGTT ACCAACCCGGGGGTCATGCCGGCAGAGGTCCAGCTCCAGATATTTCAGCGTTCCTTCAGCACCAAGGCAGGCAGCGGCAG GGGGATCGGCACTTACAGCGTGAAGCTCTTCGGCGAGCGGTACCTGAAGGGGAAGGTTGCATTCACCAGTCGAGAGCCGG AAGGGACCTCCTTCACCCTGTCAGTCCCCAAGCATTTCAACTAG
Upstream 100 bases:
>100_bases ATAGAGATCAGTATCCGCTCGGTCTGAAGGCAACGGCATTGACTGCAGCAATGAATACCGCTAAATTGTGGGCTACCTAA CAGAACCGGAGACCGGGCCG
Downstream 100 bases:
>100_bases GGACCTATCTTCAGCGTCTCTGCCACCCTCCGGAAGTATTCCTCCCGGCACCAGTTTTCCACCTCGACCATGGCCCGGAA GGCCTCGGCGAAATCCTTCT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTKAAPKDIAATFFAAAERASRTEVEEVRKQVLLDTTLTSLIDAIPDYALVLNQERQVVAANRHLLDAFGLGIASIIGKR PGETFGCIFSSEGPAGCGTGNHCSVCGAVMSILESQETLIQNCHECHISLNRNDITSMDLEVCSTPATVNGIPVTVCVMR DISDQKRRSVLERVFFHDVINTVGGIHGIAAMLMEHPDLPPEKELEYKEWMVLLSNRLIDEINHQRKLLDAERGEFRPDL GMVRVPDLVREVHALYVTHDIAAGRHLVMGEIADCSIESDGQILHRILGNLVKNALEATPQEGTVTLSCSEDAERVTFAV TNPGVMPAEVQLQIFQRSFSTKAGSGRGIGTYSVKLFGERYLKGKVAFTSREPEGTSFTLSVPKHFN
Sequences:
>Translated_387_residues MTKAAPKDIAATFFAAAERASRTEVEEVRKQVLLDTTLTSLIDAIPDYALVLNQERQVVAANRHLLDAFGLGIASIIGKR PGETFGCIFSSEGPAGCGTGNHCSVCGAVMSILESQETLIQNCHECHISLNRNDITSMDLEVCSTPATVNGIPVTVCVMR DISDQKRRSVLERVFFHDVINTVGGIHGIAAMLMEHPDLPPEKELEYKEWMVLLSNRLIDEINHQRKLLDAERGEFRPDL GMVRVPDLVREVHALYVTHDIAAGRHLVMGEIADCSIESDGQILHRILGNLVKNALEATPQEGTVTLSCSEDAERVTFAV TNPGVMPAEVQLQIFQRSFSTKAGSGRGIGTYSVKLFGERYLKGKVAFTSREPEGTSFTLSVPKHFN >Mature_386_residues TKAAPKDIAATFFAAAERASRTEVEEVRKQVLLDTTLTSLIDAIPDYALVLNQERQVVAANRHLLDAFGLGIASIIGKRP GETFGCIFSSEGPAGCGTGNHCSVCGAVMSILESQETLIQNCHECHISLNRNDITSMDLEVCSTPATVNGIPVTVCVMRD ISDQKRRSVLERVFFHDVINTVGGIHGIAAMLMEHPDLPPEKELEYKEWMVLLSNRLIDEINHQRKLLDAERGEFRPDLG MVRVPDLVREVHALYVTHDIAAGRHLVMGEIADCSIESDGQILHRILGNLVKNALEATPQEGTVTLSCSEDAERVTFAVT NPGVMPAEVQLQIFQRSFSTKAGSGRGIGTYSVKLFGERYLKGKVAFTSREPEGTSFTLSVPKHFN
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42399; Mature: 42268
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAAPKDIAATFFAAAERASRTEVEEVRKQVLLDTTLTSLIDAIPDYALVLNQERQVVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH ANRHLLDAFGLGIASIIGKRPGETFGCIFSSEGPAGCGTGNHCSVCGAVMSILESQETLI HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QNCHECHISLNRNDITSMDLEVCSTPATVNGIPVTVCVMRDISDQKRRSVLERVFFHDVI HHHHHHEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH NTVGGIHGIAAMLMEHPDLPPEKELEYKEWMVLLSNRLIDEINHQRKLLDAERGEFRPDL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GMVRVPDLVREVHALYVTHDIAAGRHLVMGEIADCSIESDGQILHRILGNLVKNALEATP CCEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC QEGTVTLSCSEDAERVTFAVTNPGVMPAEVQLQIFQRSFSTKAGSGRGIGTYSVKLFGER CCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHH YLKGKVAFTSREPEGTSFTLSVPKHFN HHCCEEEEECCCCCCCEEEEECCCCCC >Mature Secondary Structure TKAAPKDIAATFFAAAERASRTEVEEVRKQVLLDTTLTSLIDAIPDYALVLNQERQVVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH ANRHLLDAFGLGIASIIGKRPGETFGCIFSSEGPAGCGTGNHCSVCGAVMSILESQETLI HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QNCHECHISLNRNDITSMDLEVCSTPATVNGIPVTVCVMRDISDQKRRSVLERVFFHDVI HHHHHHEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH NTVGGIHGIAAMLMEHPDLPPEKELEYKEWMVLLSNRLIDEINHQRKLLDAERGEFRPDL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GMVRVPDLVREVHALYVTHDIAAGRHLVMGEIADCSIESDGQILHRILGNLVKNALEATP CCEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC QEGTVTLSCSEDAERVTFAVTNPGVMPAEVQLQIFQRSFSTKAGSGRGIGTYSVKLFGER CCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHH YLKGKVAFTSREPEGTSFTLSVPKHFN HHCCEEEEECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA