| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223483
Identifier: 78223483
GI number: 78223483
Start: 2584488
End: 2584934
Strand: Direct
Name: 78223483
Synonym: Gmet_2280
Alternate gene names: NA
Gene position: 2584488-2584934 (Clockwise)
Preceding gene: 78223482
Following gene: 78223484
Centisome position: 64.65
GC content: 36.02
Gene sequence:
>447_bases ATGATGCCGATGAGAGCTAAGTCGATATTGTTATTTATGGTGATTGCTTTGTATCCAACGTTTGTTGCAGCACTCGATAG TGAAGAAAAATATACTGGGTTTCATATTGACGTTTACGATGAGGCACTAACAAACAAAGTCATAGCTAATGCGGCTAAAT GCGAAGTTATAGATCAATTACTTAACGGTGAAAGAAAGTCTTGTTATCTGTCAAACGCTATACATAAGATTATTAGTGAG CCTGACAACAAGTTAGTGAGGTATATGCCATTAAGAAATAATTACAATCGGTTGTTTATAGAATATGAAGTTGCCTATCA CGCTTTAAGGAATGCACAATTCGGAGCACTTAAAACCATGAAAACGCTCAATGCTATTAGTGTGAGTGGCCTTCTTGAAA TGTATTCTAAATCAAATTGCCCTGAGCTTAACAAATCACAGGATTGA
Upstream 100 bases:
>100_bases GCCATGACTACATGGAGGAGAAGAAGGAGGCCTTGATTAAACTGGAAGCTGAGTTGATGAAATTGAGCATATAAGCAATG AAATTGCATTGAAAGTGAGG
Downstream 100 bases:
>100_bases CAAATAACCCTGTCTCGTCTTCTGATGCTATATCCCCACCCCTTCATCTCCCGATGAAGACTGTAGCGTCCAGTACATAC AGTAGCGATCTTATCGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MMPMRAKSILLFMVIALYPTFVAALDSEEKYTGFHIDVYDEALTNKVIANAAKCEVIDQLLNGERKSCYLSNAIHKIISE PDNKLVRYMPLRNNYNRLFIEYEVAYHALRNAQFGALKTMKTLNAISVSGLLEMYSKSNCPELNKSQD
Sequences:
>Translated_148_residues MMPMRAKSILLFMVIALYPTFVAALDSEEKYTGFHIDVYDEALTNKVIANAAKCEVIDQLLNGERKSCYLSNAIHKIISE PDNKLVRYMPLRNNYNRLFIEYEVAYHALRNAQFGALKTMKTLNAISVSGLLEMYSKSNCPELNKSQD >Mature_148_residues MMPMRAKSILLFMVIALYPTFVAALDSEEKYTGFHIDVYDEALTNKVIANAAKCEVIDQLLNGERKSCYLSNAIHKIISE PDNKLVRYMPLRNNYNRLFIEYEVAYHALRNAQFGALKTMKTLNAISVSGLLEMYSKSNCPELNKSQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16878; Mature: 16878
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPMRAKSILLFMVIALYPTFVAALDSEEKYTGFHIDVYDEALTNKVIANAAKCEVIDQL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH LNGERKSCYLSNAIHKIISEPDNKLVRYMPLRNNYNRLFIEYEVAYHALRNAQFGALKTM HCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCCHHHHHHH KTLNAISVSGLLEMYSKSNCPELNKSQD HHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MMPMRAKSILLFMVIALYPTFVAALDSEEKYTGFHIDVYDEALTNKVIANAAKCEVIDQL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH LNGERKSCYLSNAIHKIISEPDNKLVRYMPLRNNYNRLFIEYEVAYHALRNAQFGALKTM HCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCCHHHHHHH KTLNAISVSGLLEMYSKSNCPELNKSQD HHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA