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The map label for this gene is fadF [H]

Identifier: 78223468

GI number: 78223468

Start: 2564361

End: 2566346

Strand: Reverse

Name: fadF [H]

Synonym: Gmet_2264

Alternate gene names: 78223468

Gene position: 2566346-2564361 (Counterclockwise)

Preceding gene: 78223469

Following gene: 78223467

Centisome position: 64.2

GC content: 60.02

Gene sequence:

>1986_bases
ATGGAAGCGACGCGCGAAATATACTGGAACATCGGGCACGGGGTAGTATTACCGATGTATGTCCTGAGCCTGGCGGCGGT
GGCAATGCTGGTGTGGGGCTTCTGGAAACAGGTGCCCCTCTACAGGGTCGGTCGGCCCCTGGACCGGTGTGACCGGTACG
ACGAGCGGGTGAAGCGGATGGTGGGTGAGGTGCTGGGGCAGGTGAAGGTCTCCCGGGTCACGGAGGGGGGGCTGTTCCAT
TCCCTCTTCTTCTGGGGCTTTCTCACCCTGTTCGTCGGCACCCTGCTGGTGATGGTCCAGGCAGACTTTTTCACCCCCCT
CATGCACGTCAACCTCCTCTCCGGGGAATTCTACAAGGCGTTTTCCCTGGTGCTTGACCTGGCGGGGCTGGTTGCCATCC
TCATGCTGGCCGGTCTTTTTGTCCGCCGCTTCATAACAAAACCCGAGGGACTGGAGATTGTTAAGGACGACTACATCATC
CACCAGCTTCTCTTCGCCATCCTCATCACCGGCTTCATCATCGAGGGGGCGCGGATGGCGGCCACTGAGCTTACCCAGAA
TCCGGGACTGGCCCGATTCTCCCCCGTGGGATACGTCGTTGCCCAGCTCTTCGTAAGCTTCGACGAAGCCTCCATAAAGA
CCACCCACAAGGTCCTCTGGTGGCTCCACTTTGCCCTGGTGCTCGGCTTCTTCTGTGCCATTCCTTACAGCAAACTGCGC
CATATCCTCACCACCAGCCTCAACGCCTTCTTTGCCCCCCTGGAACCCATGGGGACGATCGGCACCATCAACCTGGAAGA
CGAGAGTATCGAACAGTTCGGGGCGGCCAAAGTCACCGACCTCACCTGGAAAGACATCTTCGATGCCGATGCCTGCACCA
GCTGCAAGCGGTGCCAGGAGCGCTGCCCGGCCTATGCCACCGGCAAGCCCCTCTCCCCCATGAAAGTGATCCAGCAAGTG
GGGGAAGTGGCCGAGAACGATGCCGCAGCCAGCCTGTGCGACACCGTCGGCCAGGATGTTCTCTGGTCCTGCACCACCTG
CCGTGCCTGCCAGGACATCTGCCCGGCCAACAACGAACACGTCAACAAGATCCTGGAGATGAGAAGAAACCTCACCCTCA
TGGAAGGTGCCTTTCCCGGCGATGAAGTACGGACCGCCATCGGCAACATCGAAGTCAACGGCAACCCCTTCGGCCTTGCC
TTCGCCGCCCGGGGGGAGTGGAGTGACAATCTGCCGGTTACCCTCATGGAGAGTGGCGAGGAAGTGGATATCCTCTACTT
CGTCGGCTGCTACGCCTCCTTCGACAAACGGAACCGGGAGATCGCCAAAAGCTTCATCACCATCTGCCAGGCCGCCGGGA
TAAAAGTCGGGATACTTGGCAAGGAAGAGAAGTGCTGCGGTGAGCCGGCGAGAAAACTGGGGAACGAATACCTCTACCAG
ATGACGGCCCAGGAAAACATCGAACTCATCAAGGGGTACGGGGTCAAAAAGATCGTCACCACCTGTCCCCACTGCTTCAA
CACCCTGGGAAGGGACTACAAGGATCTCGGCCTCGATATTCCGGTGGAACACTACAGCACCTATCTGCACGGTCTGCTCA
AGAGCAACCGGCTCAACCTGACGCCGGCACCGTTTGTCGCTACCTACCACGACTCCTGCTACGTGGGGCGGTACATGGAC
ATCATCGAAGAGCCGCGGAGCATCCTCAAACAAGCGGGAGGCCAGCTTCGGGAAATGGAGAAGAGCGGCGGCGACAGCTT
CTGCTGCGGTGCGGGTGGGGGACGTATCCTGGCCGAAGAAAAGCTCGGCACCAAGATCAGCGAGAAGCGGGTGGCCATGG
CCCAGGAGACCGAGGCACCGCTGCTGGTCTCCAACTGCCCCTTCTGCCTCACCATGTTCGAGGATGGGATCAAGACCGGT
GGTGCCGAGGGAAGTCTTGTGGCGAAGGACTTGGCGGAGATCGTGGTAGAGCGCCTGGGCGCCTAG

Upstream 100 bases:

>100_bases
CGATTTTTCAGGTTGCCGATGTGGGGATTGTTGCCGACCTGCAGGAGTTCCTGCCCGAATTGACCGAACGGATAAACGAG
GGTTGATCGGGAACTGCTCC

Downstream 100 bases:

>100_bases
GTTCGTTCCATAAGTCCCATAAGTCCTATTAAAGGTTAATACTGGAGGTATATATGAAGATACTGGTCTGCATCAAACAG
GTACCGGACATGGAGTCACG

Product: hypothetical protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MEATREIYWNIGHGVVLPMYVLSLAAVAMLVWGFWKQVPLYRVGRPLDRCDRYDERVKRMVGEVLGQVKVSRVTEGGLFH
SLFFWGFLTLFVGTLLVMVQADFFTPLMHVNLLSGEFYKAFSLVLDLAGLVAILMLAGLFVRRFITKPEGLEIVKDDYII
HQLLFAILITGFIIEGARMAATELTQNPGLARFSPVGYVVAQLFVSFDEASIKTTHKVLWWLHFALVLGFFCAIPYSKLR
HILTTSLNAFFAPLEPMGTIGTINLEDESIEQFGAAKVTDLTWKDIFDADACTSCKRCQERCPAYATGKPLSPMKVIQQV
GEVAENDAAASLCDTVGQDVLWSCTTCRACQDICPANNEHVNKILEMRRNLTLMEGAFPGDEVRTAIGNIEVNGNPFGLA
FAARGEWSDNLPVTLMESGEEVDILYFVGCYASFDKRNREIAKSFITICQAAGIKVGILGKEEKCCGEPARKLGNEYLYQ
MTAQENIELIKGYGVKKIVTTCPHCFNTLGRDYKDLGLDIPVEHYSTYLHGLLKSNRLNLTPAPFVATYHDSCYVGRYMD
IIEEPRSILKQAGGQLREMEKSGGDSFCCGAGGGRILAEEKLGTKISEKRVAMAQETEAPLLVSNCPFCLTMFEDGIKTG
GAEGSLVAKDLAEIVVERLGA

Sequences:

>Translated_661_residues
MEATREIYWNIGHGVVLPMYVLSLAAVAMLVWGFWKQVPLYRVGRPLDRCDRYDERVKRMVGEVLGQVKVSRVTEGGLFH
SLFFWGFLTLFVGTLLVMVQADFFTPLMHVNLLSGEFYKAFSLVLDLAGLVAILMLAGLFVRRFITKPEGLEIVKDDYII
HQLLFAILITGFIIEGARMAATELTQNPGLARFSPVGYVVAQLFVSFDEASIKTTHKVLWWLHFALVLGFFCAIPYSKLR
HILTTSLNAFFAPLEPMGTIGTINLEDESIEQFGAAKVTDLTWKDIFDADACTSCKRCQERCPAYATGKPLSPMKVIQQV
GEVAENDAAASLCDTVGQDVLWSCTTCRACQDICPANNEHVNKILEMRRNLTLMEGAFPGDEVRTAIGNIEVNGNPFGLA
FAARGEWSDNLPVTLMESGEEVDILYFVGCYASFDKRNREIAKSFITICQAAGIKVGILGKEEKCCGEPARKLGNEYLYQ
MTAQENIELIKGYGVKKIVTTCPHCFNTLGRDYKDLGLDIPVEHYSTYLHGLLKSNRLNLTPAPFVATYHDSCYVGRYMD
IIEEPRSILKQAGGQLREMEKSGGDSFCCGAGGGRILAEEKLGTKISEKRVAMAQETEAPLLVSNCPFCLTMFEDGIKTG
GAEGSLVAKDLAEIVVERLGA
>Mature_661_residues
MEATREIYWNIGHGVVLPMYVLSLAAVAMLVWGFWKQVPLYRVGRPLDRCDRYDERVKRMVGEVLGQVKVSRVTEGGLFH
SLFFWGFLTLFVGTLLVMVQADFFTPLMHVNLLSGEFYKAFSLVLDLAGLVAILMLAGLFVRRFITKPEGLEIVKDDYII
HQLLFAILITGFIIEGARMAATELTQNPGLARFSPVGYVVAQLFVSFDEASIKTTHKVLWWLHFALVLGFFCAIPYSKLR
HILTTSLNAFFAPLEPMGTIGTINLEDESIEQFGAAKVTDLTWKDIFDADACTSCKRCQERCPAYATGKPLSPMKVIQQV
GEVAENDAAASLCDTVGQDVLWSCTTCRACQDICPANNEHVNKILEMRRNLTLMEGAFPGDEVRTAIGNIEVNGNPFGLA
FAARGEWSDNLPVTLMESGEEVDILYFVGCYASFDKRNREIAKSFITICQAAGIKVGILGKEEKCCGEPARKLGNEYLYQ
MTAQENIELIKGYGVKKIVTTCPHCFNTLGRDYKDLGLDIPVEHYSTYLHGLLKSNRLNLTPAPFVATYHDSCYVGRYMD
IIEEPRSILKQAGGQLREMEKSGGDSFCCGAGGGRILAEEKLGTKISEKRVAMAQETEAPLLVSNCPFCLTMFEDGIKTG
GAEGSLVAKDLAEIVVERLGA

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 73151; Mature: 73151

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATREIYWNIGHGVVLPMYVLSLAAVAMLVWGFWKQVPLYRVGRPLDRCDRYDERVKRM
CCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH
VGEVLGQVKVSRVTEGGLFHSLFFWGFLTLFVGTLLVMVQADFFTPLMHVNLLSGEFYKA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
FSLVLDLAGLVAILMLAGLFVRRFITKPEGLEIVKDDYIIHQLLFAILITGFIIEGARMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHH
ATELTQNPGLARFSPVGYVVAQLFVSFDEASIKTTHKVLWWLHFALVLGFFCAIPYSKLR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HILTTSLNAFFAPLEPMGTIGTINLEDESIEQFGAAKVTDLTWKDIFDADACTSCKRCQE
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHH
RCPAYATGKPLSPMKVIQQVGEVAENDAAASLCDTVGQDVLWSCTTCRACQDICPANNEH
HCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHH
VNKILEMRRNLTLMEGAFPGDEVRTAIGNIEVNGNPFGLAFAARGEWSDNLPVTLMESGE
HHHHHHHHHCCEEEECCCCCHHHHHHHCCEEECCCCEEEEEEECCCCCCCCCEEEECCCC
EVDILYFVGCYASFDKRNREIAKSFITICQAAGIKVGILGKEEKCCGEPARKLGNEYLYQ
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCHHHHHHHHHHHHH
MTAQENIELIKGYGVKKIVTTCPHCFNTLGRDYKDLGLDIPVEHYSTYLHGLLKSNRLNL
HHHHCCHHHHHCCCHHHHHHHCHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCC
TPAPFVATYHDSCYVGRYMDIIEEPRSILKQAGGQLREMEKSGGDSFCCGAGGGRILAEE
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCEEEHH
KLGTKISEKRVAMAQETEAPLLVSNCPFCLTMFEDGIKTGGAEGSLVAKDLAEIVVERLG
HHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure
MEATREIYWNIGHGVVLPMYVLSLAAVAMLVWGFWKQVPLYRVGRPLDRCDRYDERVKRM
CCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH
VGEVLGQVKVSRVTEGGLFHSLFFWGFLTLFVGTLLVMVQADFFTPLMHVNLLSGEFYKA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
FSLVLDLAGLVAILMLAGLFVRRFITKPEGLEIVKDDYIIHQLLFAILITGFIIEGARMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHH
ATELTQNPGLARFSPVGYVVAQLFVSFDEASIKTTHKVLWWLHFALVLGFFCAIPYSKLR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HILTTSLNAFFAPLEPMGTIGTINLEDESIEQFGAAKVTDLTWKDIFDADACTSCKRCQE
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHH
RCPAYATGKPLSPMKVIQQVGEVAENDAAASLCDTVGQDVLWSCTTCRACQDICPANNEH
HCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHH
VNKILEMRRNLTLMEGAFPGDEVRTAIGNIEVNGNPFGLAFAARGEWSDNLPVTLMESGE
HHHHHHHHHCCEEEECCCCCHHHHHHHCCEEECCCCEEEEEEECCCCCCCCCEEEECCCC
EVDILYFVGCYASFDKRNREIAKSFITICQAAGIKVGILGKEEKCCGEPARKLGNEYLYQ
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCHHHHHHHHHHHHH
MTAQENIELIKGYGVKKIVTTCPHCFNTLGRDYKDLGLDIPVEHYSTYLHGLLKSNRLNL
HHHHCCHHHHHCCCHHHHHHHCHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCC
TPAPFVATYHDSCYVGRYMDIIEEPRSILKQAGGQLREMEKSGGDSFCCGAGGGRILAEE
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCEEEHH
KLGTKISEKRVAMAQETEAPLLVSNCPFCLTMFEDGIKTGGAEGSLVAKDLAEIVVERLG
HHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]