Click here to switch to the map view.

The map label for this gene is 78223433

Identifier: 78223433

GI number: 78223433

Start: 2521923

End: 2522378

Strand: Reverse

Name: 78223433

Synonym: Gmet_2228

Alternate gene names: NA

Gene position: 2522378-2521923 (Counterclockwise)

Preceding gene: 78223434

Following gene: 78223432

Centisome position: 63.1

GC content: 46.93

Gene sequence:

>456_bases
ATGGCCCGTGTTCAGATAGATTTACCCGATAAGTTTATTTATTCTACCAAACTACAGGTACGTATAGGGGATGTAGCGGC
CGGTTTCCACATGGGCAACCATATGCTTATCTCTTATCTCAATGAGGCATTGCTCCTGTTCTTTCGCGAAGCAGGTGTCA
TCGGGATGTTCGGTACGAAGATGAACCTGATCGATGCAGACCTCGCCGTGATCTACAAAACTGAGGCTGCGCATGGGGAC
ATGCTTCGTGTCGATTTAGGGATTATTCCATCGGGTATATACGGTTTCGATGCCTTCTATCGGGTAACGAACGAGAGAAC
GGGAGAGGAAATAGCAATAGCCAAAATGGCCATGCTGTTTTTCGATTACGAGCAAAGACAGATTTCCCCTGTACCGGAGG
CGTTCACCGTTGCCTTGCCCAAAATATATAATCGCGCAATTCCTTCTACTGAATGA

Upstream 100 bases:

>100_bases
AGAAATTTATTGAATGACGCTGGTCCGCTGCAGCAAGAACGGATGACAAAAGAAATTTGTATTTAGTGGCTGCCGAGTCG
CTCCGGAAAGGTTGAAGACC

Downstream 100 bases:

>100_bases
TGCCGGCCTGTGGTACGAGAAGTAACTACCCCAAAGAAAGAGGCCTAATAATGACTGAAAGTAACAGTTGTACAAAGCGC
ACTTTCTGTACAATTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; Thioesterase-Like Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MARVQIDLPDKFIYSTKLQVRIGDVAAGFHMGNHMLISYLNEALLLFFREAGVIGMFGTKMNLIDADLAVIYKTEAAHGD
MLRVDLGIIPSGIYGFDAFYRVTNERTGEEIAIAKMAMLFFDYEQRQISPVPEAFTVALPKIYNRAIPSTE

Sequences:

>Translated_151_residues
MARVQIDLPDKFIYSTKLQVRIGDVAAGFHMGNHMLISYLNEALLLFFREAGVIGMFGTKMNLIDADLAVIYKTEAAHGD
MLRVDLGIIPSGIYGFDAFYRVTNERTGEEIAIAKMAMLFFDYEQRQISPVPEAFTVALPKIYNRAIPSTE
>Mature_150_residues
ARVQIDLPDKFIYSTKLQVRIGDVAAGFHMGNHMLISYLNEALLLFFREAGVIGMFGTKMNLIDADLAVIYKTEAAHGDM
LRVDLGIIPSGIYGFDAFYRVTNERTGEEIAIAKMAMLFFDYEQRQISPVPEAFTVALPKIYNRAIPSTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16944; Mature: 16813

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVQIDLPDKFIYSTKLQVRIGDVAAGFHMGNHMLISYLNEALLLFFREAGVIGMFGTK
CCEEEEECCCCEEEEEEEEEEECCEEECEECCCHHHHHHHHHHHHHHHHHCCEEEEECCC
MNLIDADLAVIYKTEAAHGDMLRVDLGIIPSGIYGFDAFYRVTNERTGEEIAIAKMAMLF
CEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHH
FDYEQRQISPVPEAFTVALPKIYNRAIPSTE
HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARVQIDLPDKFIYSTKLQVRIGDVAAGFHMGNHMLISYLNEALLLFFREAGVIGMFGTK
CEEEEECCCCEEEEEEEEEEECCEEECEECCCHHHHHHHHHHHHHHHHHCCEEEEECCC
MNLIDADLAVIYKTEAAHGDMLRVDLGIIPSGIYGFDAFYRVTNERTGEEIAIAKMAMLF
CEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHH
FDYEQRQISPVPEAFTVALPKIYNRAIPSTE
HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA