| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223386
Identifier: 78223386
GI number: 78223386
Start: 2464032
End: 2465099
Strand: Reverse
Name: 78223386
Synonym: Gmet_2179
Alternate gene names: NA
Gene position: 2465099-2464032 (Counterclockwise)
Preceding gene: 78223387
Following gene: 78223385
Centisome position: 61.67
GC content: 40.92
Gene sequence:
>1068_bases ATGAGCGAACCTAGAGCAACTGATATATTTGCAGAAAAAATAGTTGTAGTGACGGTCACCTATGGGGATAGATCAGTTTA TGTATCAAGACTGCTGGAACGAATAGCACAGCTTAACATAAAGAAAATAGTCCTCGTGGACAATAACTCGAGCTGCTCCA CTAAAGCCCTGTTGGATACCGCTGCATCTCAATACCATAACGAGCTCATTGATAGTATAACCATGGCAGAGAATGTCGGA TCAGCAAAAGCATTCAAGGCTGGATTGATAAAAGCCAACCAGTTGGAGGGGTATGAATACATTTTGCTTCTGGACGACGA TAACCTGCCAGACTTGGATCTGATTGAAGTCCTGGAATCATATTGGACTAACCTAGCTTACAAGCATGAACTAACGGCTC TGGCTTGCAACAGGGTACATTTGGGAATCAATGAAAGAGTTGTCGCTCAGGATAACCCTTGGCTATTGCTCGGGAAGCCG AACAGTTTCTTGGGGTTCCATGTTGGTGAAATTATCAGAAACACATGCGCCAGGCTTTTTAAGTTACCCAAAGCCAGCCT GAGCGGTCGCGGAACCAATTACAGGACAACAAACTTTGCACCCTATGGAGGCCTGTTTTTTCATAAAAGTCTACTCGAGG TTATCGGATATCCAAACGAAGACTATGTCATCTATGCTGATGACTGTGAATTTACGTATCGTATACCTTTAAACGGCGGA ATGATTCTCGCATTATTGGATGCCAAAATATATGACATGGATGACAGATCTGAGATGACCGCCAATATCTTTAGTATTTA TGCCAATATTTATGACAAGGTGAGACTGTATTACACCTTTAGAAATGCAATACATTTCCATTTGAATCAACATTGCAACA ACAAAACTATATTTATCTGCAATTTATTGATCTACTACGCGATATGCGTATGTTTCGTGCTGAGTAAATTTAATTATTCT CGGTTGCGGATTTTTTATGACGCGTTATTGGACGGTATCAGCGGTAATATTGGAGAGGCTGACAGTTACACGTTAGCAGA TGTGAATTTATCGGTTAGAACTTTATAG
Upstream 100 bases:
>100_bases AAATTGTAAATCGCTCAAAATGGACCCAGGAATTTTATGAAGAGTGTTTCTGCTTTATGTTTCCGGCATTCGAAATCAAG TTTGAGTTGCAAAAATAGTC
Downstream 100 bases:
>100_bases GAACAAATATTTAATCATATGACACTATGACTTAATCCAAGCAGTATTATATAGCAACCACAAGATTGCACTACTAACAC TGAACTTTCACTTATTATTC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSEPRATDIFAEKIVVVTVTYGDRSVYVSRLLERIAQLNIKKIVLVDNNSSCSTKALLDTAASQYHNELIDSITMAENVG SAKAFKAGLIKANQLEGYEYILLLDDDNLPDLDLIEVLESYWTNLAYKHELTALACNRVHLGINERVVAQDNPWLLLGKP NSFLGFHVGEIIRNTCARLFKLPKASLSGRGTNYRTTNFAPYGGLFFHKSLLEVIGYPNEDYVIYADDCEFTYRIPLNGG MILALLDAKIYDMDDRSEMTANIFSIYANIYDKVRLYYTFRNAIHFHLNQHCNNKTIFICNLLIYYAICVCFVLSKFNYS RLRIFYDALLDGISGNIGEADSYTLADVNLSVRTL
Sequences:
>Translated_355_residues MSEPRATDIFAEKIVVVTVTYGDRSVYVSRLLERIAQLNIKKIVLVDNNSSCSTKALLDTAASQYHNELIDSITMAENVG SAKAFKAGLIKANQLEGYEYILLLDDDNLPDLDLIEVLESYWTNLAYKHELTALACNRVHLGINERVVAQDNPWLLLGKP NSFLGFHVGEIIRNTCARLFKLPKASLSGRGTNYRTTNFAPYGGLFFHKSLLEVIGYPNEDYVIYADDCEFTYRIPLNGG MILALLDAKIYDMDDRSEMTANIFSIYANIYDKVRLYYTFRNAIHFHLNQHCNNKTIFICNLLIYYAICVCFVLSKFNYS RLRIFYDALLDGISGNIGEADSYTLADVNLSVRTL >Mature_354_residues SEPRATDIFAEKIVVVTVTYGDRSVYVSRLLERIAQLNIKKIVLVDNNSSCSTKALLDTAASQYHNELIDSITMAENVGS AKAFKAGLIKANQLEGYEYILLLDDDNLPDLDLIEVLESYWTNLAYKHELTALACNRVHLGINERVVAQDNPWLLLGKPN SFLGFHVGEIIRNTCARLFKLPKASLSGRGTNYRTTNFAPYGGLFFHKSLLEVIGYPNEDYVIYADDCEFTYRIPLNGGM ILALLDAKIYDMDDRSEMTANIFSIYANIYDKVRLYYTFRNAIHFHLNQHCNNKTIFICNLLIYYAICVCFVLSKFNYSR LRIFYDALLDGISGNIGEADSYTLADVNLSVRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40245; Mature: 40113
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPRATDIFAEKIVVVTVTYGDRSVYVSRLLERIAQLNIKKIVLVDNNSSCSTKALLDT CCCCCCHHHHHCEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH AASQYHNELIDSITMAENVGSAKAFKAGLIKANQLEGYEYILLLDDDNLPDLDLIEVLES HHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEEEECCCCCCCHHHHHHHHH YWTNLAYKHELTALACNRVHLGINERVVAQDNPWLLLGKPNSFLGFHVGEIIRNTCARLF HHHCCEEHHHHHEEEECEEEECCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KLPKASLSGRGTNYRTTNFAPYGGLFFHKSLLEVIGYPNEDYVIYADDCEFTYRIPLNGG HCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCC MILALLDAKIYDMDDRSEMTANIFSIYANIYDKVRLYYTFRNAIHFHLNQHCNNKTIFIC EEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEECEEEEEECCCCCCCEEEHH NLLIYYAICVCFVLSKFNYSRLRIFYDALLDGISGNIGEADSYTLADVNLSVRTL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure SEPRATDIFAEKIVVVTVTYGDRSVYVSRLLERIAQLNIKKIVLVDNNSSCSTKALLDT CCCCCHHHHHCEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH AASQYHNELIDSITMAENVGSAKAFKAGLIKANQLEGYEYILLLDDDNLPDLDLIEVLES HHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEEEECCCCCCCHHHHHHHHH YWTNLAYKHELTALACNRVHLGINERVVAQDNPWLLLGKPNSFLGFHVGEIIRNTCARLF HHHCCEEHHHHHEEEECEEEECCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KLPKASLSGRGTNYRTTNFAPYGGLFFHKSLLEVIGYPNEDYVIYADDCEFTYRIPLNGG HCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCC MILALLDAKIYDMDDRSEMTANIFSIYANIYDKVRLYYTFRNAIHFHLNQHCNNKTIFIC EEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEECEEEEEECCCCCCCEEEHH NLLIYYAICVCFVLSKFNYSRLRIFYDALLDGISGNIGEADSYTLADVNLSVRTL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA