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The map label for this gene is fixB [H]

Identifier: 78223359

GI number: 78223359

Start: 2422548

End: 2423456

Strand: Reverse

Name: fixB [H]

Synonym: Gmet_2152

Alternate gene names: 78223359

Gene position: 2423456-2422548 (Counterclockwise)

Preceding gene: 78223360

Following gene: 78223358

Centisome position: 60.63

GC content: 59.96

Gene sequence:

>909_bases
ATGAAAGCGCTACTTGTATGCGAATACCGTGAAGGAAAGCTCCTCGAAACAAGCTATGAACTGGTTGCCTTTGCCGAGAA
GCTGGGGGCCGAGAAAGCGATGGTCCTGATCGGGAGCGAGGCTGAGGCTCCCAAGGTCAACGGCACGGTCTACCTGGCCG
ATGCCGGCAAATATGGCGAGTACAACCCGGATGTCCACAAGAAGATCGTCCTGGCGGCGATTGAGCGGGAAAACCCCGAC
TACGTCGTCTTCGTCCATTCCTCCTACGGCTGGGACCTTGCGCCCCGCGTCGCCGCAAACCTGAAGGCAGCCCAGATTTC
CGAGATCGTTGACATCGTCGATGGCAAATTTGAAGTGGGCGTCTGCAATGCCAAGCTCAGGCGCACCGTGACCCCGAAGT
CGGGAAAGGCCGTTCTTACCATTCAGGCCGGGGCTTTCAGTGCGGCTGCCGCTTCCGGGACTCCGCAACTGGAGAGGATC
GAGGCCGATGGCGCTTCGGTGCTGGAATTTGTCGGCTATGAGCCGGCGGAGAAGAAGGATGTGGATCTTACCCGGGCCGA
GATCATCGTCAGCGCTGGCCGGGGTGTTGGGAAAAAGGAAAACGTGCCGGTCATCGCCGCCCTTGCCAAGGCCATGGGTG
GCGAGTTGGGGGCAAGCCGTCCGGTGGTGGATGCCGGGTGGGTCGAGCATAGCCACCAGGTGGGGACCACGGGGCAGACG
GTCAGCCCTAAACTCTATATGGCGTGCGGCATAAGTGGTGCGATCCAGCACCTCGCCGGGATGAAGAAGTCTGATTTCAT
CGTGGCCATCAACAAGGATAAGGATGCGCCCATCGGCGAGGTGGCAGACGTCCTGGTCGTTGCCGATGTGCTGCAGTTCG
TGCCGGCATTGACGGCAAAGTTTCAGTAG

Upstream 100 bases:

>100_bases
AGGGGGCGGCATCGTTCTGGAAGGGGACCTGAACGAAATGGCAGACAAGCTCCTCGGCATCCTCAAAGAAAAAACGGCAG
TAGTGAGATAGGGGGTAAGC

Downstream 100 bases:

>100_bases
CAGGGGTGGCGCTTGCCCCGCCCGATCGGGGGCGCGGCAAGCAGCGCCACTGCAGCAGGTTTAAGCGAAGAGATGTTTGC
AGTGGGTAAGCTTGTTTCGA

Product: electron transfer flavoprotein subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKALLVCEYREGKLLETSYELVAFAEKLGAEKAMVLIGSEAEAPKVNGTVYLADAGKYGEYNPDVHKKIVLAAIERENPD
YVVFVHSSYGWDLAPRVAANLKAAQISEIVDIVDGKFEVGVCNAKLRRTVTPKSGKAVLTIQAGAFSAAAASGTPQLERI
EADGASVLEFVGYEPAEKKDVDLTRAEIIVSAGRGVGKKENVPVIAALAKAMGGELGASRPVVDAGWVEHSHQVGTTGQT
VSPKLYMACGISGAIQHLAGMKKSDFIVAINKDKDAPIGEVADVLVVADVLQFVPALTAKFQ

Sequences:

>Translated_302_residues
MKALLVCEYREGKLLETSYELVAFAEKLGAEKAMVLIGSEAEAPKVNGTVYLADAGKYGEYNPDVHKKIVLAAIERENPD
YVVFVHSSYGWDLAPRVAANLKAAQISEIVDIVDGKFEVGVCNAKLRRTVTPKSGKAVLTIQAGAFSAAAASGTPQLERI
EADGASVLEFVGYEPAEKKDVDLTRAEIIVSAGRGVGKKENVPVIAALAKAMGGELGASRPVVDAGWVEHSHQVGTTGQT
VSPKLYMACGISGAIQHLAGMKKSDFIVAINKDKDAPIGEVADVLVVADVLQFVPALTAKFQ
>Mature_302_residues
MKALLVCEYREGKLLETSYELVAFAEKLGAEKAMVLIGSEAEAPKVNGTVYLADAGKYGEYNPDVHKKIVLAAIERENPD
YVVFVHSSYGWDLAPRVAANLKAAQISEIVDIVDGKFEVGVCNAKLRRTVTPKSGKAVLTIQAGAFSAAAASGTPQLERI
EADGASVLEFVGYEPAEKKDVDLTRAEIIVSAGRGVGKKENVPVIAALAKAMGGELGASRPVVDAGWVEHSHQVGTTGQT
VSPKLYMACGISGAIQHLAGMKKSDFIVAINKDKDAPIGEVADVLVVADVLQFVPALTAKFQ

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=311, Percent_Identity=35.048231511254, Blast_Score=154, Evalue=7e-38,
Organism=Homo sapiens, GI189181759, Length=258, Percent_Identity=37.984496124031, Blast_Score=147, Evalue=9e-36,
Organism=Escherichia coli, GI1786226, Length=231, Percent_Identity=39.3939393939394, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787990, Length=244, Percent_Identity=30.327868852459, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082157, Length=239, Percent_Identity=31.7991631799163, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17506929, Length=306, Percent_Identity=37.9084967320261, Blast_Score=171, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6325261, Length=238, Percent_Identity=35.2941176470588, Blast_Score=123, Evalue=4e-29,
Organism=Drosophila melanogaster, GI17136898, Length=309, Percent_Identity=38.1877022653722, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24652801, Length=309, Percent_Identity=38.1877022653722, Blast_Score=171, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 31923; Mature: 31923

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLVCEYREGKLLETSYELVAFAEKLGAEKAMVLIGSEAEAPKVNGTVYLADAGKYGE
CCEEEEEECCCCCEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCCC
YNPDVHKKIVLAAIERENPDYVVFVHSSYGWDLAPRVAANLKAAQISEIVDIVDGKFEVG
CCCCHHHEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEE
VCNAKLRRTVTPKSGKAVLTIQAGAFSAAAASGTPQLERIEADGASVLEFVGYEPAEKKD
EECHHHHEEECCCCCCEEEEEECCCCCHHCCCCCCCCEEEECCCHHHHHHHCCCCCCCCC
VDLTRAEIIVSAGRGVGKKENVPVIAALAKAMGGELGASRPVVDAGWVEHSHQVGTTGQT
CCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCC
VSPKLYMACGISGAIQHLAGMKKSDFIVAINKDKDAPIGEVADVLVVADVLQFVPALTAK
CCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FQ
CC
>Mature Secondary Structure
MKALLVCEYREGKLLETSYELVAFAEKLGAEKAMVLIGSEAEAPKVNGTVYLADAGKYGE
CCEEEEEECCCCCEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCCC
YNPDVHKKIVLAAIERENPDYVVFVHSSYGWDLAPRVAANLKAAQISEIVDIVDGKFEVG
CCCCHHHEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEE
VCNAKLRRTVTPKSGKAVLTIQAGAFSAAAASGTPQLERIEADGASVLEFVGYEPAEKKD
EECHHHHEEECCCCCCEEEEEECCCCCHHCCCCCCCCEEEECCCHHHHHHHCCCCCCCCC
VDLTRAEIIVSAGRGVGKKENVPVIAALAKAMGGELGASRPVVDAGWVEHSHQVGTTGQT
CCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCC
VSPKLYMACGISGAIQHLAGMKKSDFIVAINKDKDAPIGEVADVLVVADVLQFVPALTAK
CCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7875566 [H]