| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223348
Identifier: 78223348
GI number: 78223348
Start: 2407476
End: 2408540
Strand: Reverse
Name: 78223348
Synonym: Gmet_2141
Alternate gene names: NA
Gene position: 2408540-2407476 (Counterclockwise)
Preceding gene: 78223349
Following gene: 78223323
Centisome position: 60.25
GC content: 61.69
Gene sequence:
>1065_bases ATGATGCTATCCATGACCTTTCCGTATTCTCCTCCCCACTCGGATGGCGAGCTGGTGGAGATTGGCCCTGATGTCAGATG GCTGCGCATGCCGGTGACCTACGCCCCTGACCACGTGAATATCTACCTGGTGCGGGTTGCGGGAGGGTGGCTCATTGTGG ACACGGGGCTCGATTCGCCCGAGGCGCGGAGAATATGGGAGGAGGTATTTTCCGGGCCCCTTGCCGGTGAAAAGGTGGTG GGGGTGTACTGCACCCATTACCACGTGGATCACCTGGGGCTGGCCGGCTACCTGACGGAGCGCTGGCGGGTTCCCCTCTT CATGACCTACGAGGAGTATTACACCCTGCTGGGGTGGCCGGACCTTCCCCAAGAGGTGCCGTGGCAGCATGTCGAATTTT TCCAACGGGCAGGCTTCCCGCAGGAACTGTTGCCCCAGACGCTGGTGATGTTCGACTTTGCCCGCGAGATATCCCCCATG CCTCTCTCCTTCGTCCGTTTGCAGGATCGCAGCCACCTGCCGCTGGACGAGGAGTGGCAGGTCATTGTCGGCCGGGGACA TTCCCCCGAGCATGCACTGCTGCTTTCGAAGGTGCGTAAAATTCTCATCTCCGGGGACCAACTCCTGCCGAGCATCTCCA CCAACGTCTCGGTCAGCGTCATGAATCCGGAGGACGACCCCCTCAGCCATTGGCTTGCATCTCTCGACCGTCTCGCGACA ATCCCCGACGACGTCCTTGTGCTCCCGGGGCACGGGCTCCCCTTCCGCGGGGCGAGGAAAAGGGTCGCGGAGTTACGGGG TCATCACCGGCGCCGGTCCCAGGTGATAGTGGATGCCTGTGCCGGCAGTGAACTGTCCGCTTATGAGCTGGTGAAGGTGC TCTACTCCTTCTCATTGGGGGACTTTGATCTGCAGCTGGCGCTGGGGGAATGCCTTTCCCACGTGCGCTATCTGGCGTGC CGCGGCAGGCTGGAGGCGAGGCTCGATGGAGAAGGGATCAACCGCTACCGCAGTGTCAGGGGGGTGCGAGCTGTCAATGG CGGTGCTGGTTTTTGTCGTGACTGA
Upstream 100 bases:
>100_bases TGCCGACCAACGAGGCGATGCTTGCCTATCACCGGCGGTTGGGGCATTCTCTGACCTATTCCGACGAGACCGATACCTAC CGAATGGAGTACCGATTCAA
Downstream 100 bases:
>100_bases CAAGTGTGGCCGGGGTGCTTAAGAGGGTTCGGCGGCAATGAGCGGGGAGTTGGGCTTACACCGCGGGGAATTCCCGCAAC AGGCGGAGGTAATCCTCCTC
Product: Beta-lactamase-like
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Zn-Dependent Hydrolases; Zn-Dependent Hydrolase Glyoxylase; Beta Lactamase; Metallo-Dependent Enzymatic Protein; Zinc Metallohydrolase; Beta-Lactamase Class B; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zinc Metallohydrolase Glyoxalase II Family
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSPEARRIWEEVFSGPLAGEKVV GVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWPDLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPM PLSFVRLQDRSHLPLDEEWQVIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLGDFDLQLALGECLSHVRYLAC RGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD
Sequences:
>Translated_354_residues MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSPEARRIWEEVFSGPLAGEKVV GVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWPDLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPM PLSFVRLQDRSHLPLDEEWQVIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLGDFDLQLALGECLSHVRYLAC RGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD >Mature_354_residues MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSPEARRIWEEVFSGPLAGEKVV GVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWPDLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPM PLSFVRLQDRSHLPLDEEWQVIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLGDFDLQLALGECLSHVRYLAC RGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40034; Mature: 40034
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSP CEEEEECCCCCCCCCCCEEEECCCCEEEEECCEECCCCEEEEEEEEECCEEEEECCCCCH EARRIWEEVFSGPLAGEKVVGVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWP HHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCC DLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPMPLSFVRLQDRSHLPLDEEWQ CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCE VIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT EEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLG CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCC DFDLQLALGECLSHVRYLACRGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEECCCCCCCCC >Mature Secondary Structure MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSP CEEEEECCCCCCCCCCCEEEECCCCEEEEECCEECCCCEEEEEEEEECCEEEEECCCCCH EARRIWEEVFSGPLAGEKVVGVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWP HHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCC DLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPMPLSFVRLQDRSHLPLDEEWQ CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCE VIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT EEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLG CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCC DFDLQLALGECLSHVRYLACRGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA