Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78223348

Identifier: 78223348

GI number: 78223348

Start: 2407476

End: 2408540

Strand: Reverse

Name: 78223348

Synonym: Gmet_2141

Alternate gene names: NA

Gene position: 2408540-2407476 (Counterclockwise)

Preceding gene: 78223349

Following gene: 78223323

Centisome position: 60.25

GC content: 61.69

Gene sequence:

>1065_bases
ATGATGCTATCCATGACCTTTCCGTATTCTCCTCCCCACTCGGATGGCGAGCTGGTGGAGATTGGCCCTGATGTCAGATG
GCTGCGCATGCCGGTGACCTACGCCCCTGACCACGTGAATATCTACCTGGTGCGGGTTGCGGGAGGGTGGCTCATTGTGG
ACACGGGGCTCGATTCGCCCGAGGCGCGGAGAATATGGGAGGAGGTATTTTCCGGGCCCCTTGCCGGTGAAAAGGTGGTG
GGGGTGTACTGCACCCATTACCACGTGGATCACCTGGGGCTGGCCGGCTACCTGACGGAGCGCTGGCGGGTTCCCCTCTT
CATGACCTACGAGGAGTATTACACCCTGCTGGGGTGGCCGGACCTTCCCCAAGAGGTGCCGTGGCAGCATGTCGAATTTT
TCCAACGGGCAGGCTTCCCGCAGGAACTGTTGCCCCAGACGCTGGTGATGTTCGACTTTGCCCGCGAGATATCCCCCATG
CCTCTCTCCTTCGTCCGTTTGCAGGATCGCAGCCACCTGCCGCTGGACGAGGAGTGGCAGGTCATTGTCGGCCGGGGACA
TTCCCCCGAGCATGCACTGCTGCTTTCGAAGGTGCGTAAAATTCTCATCTCCGGGGACCAACTCCTGCCGAGCATCTCCA
CCAACGTCTCGGTCAGCGTCATGAATCCGGAGGACGACCCCCTCAGCCATTGGCTTGCATCTCTCGACCGTCTCGCGACA
ATCCCCGACGACGTCCTTGTGCTCCCGGGGCACGGGCTCCCCTTCCGCGGGGCGAGGAAAAGGGTCGCGGAGTTACGGGG
TCATCACCGGCGCCGGTCCCAGGTGATAGTGGATGCCTGTGCCGGCAGTGAACTGTCCGCTTATGAGCTGGTGAAGGTGC
TCTACTCCTTCTCATTGGGGGACTTTGATCTGCAGCTGGCGCTGGGGGAATGCCTTTCCCACGTGCGCTATCTGGCGTGC
CGCGGCAGGCTGGAGGCGAGGCTCGATGGAGAAGGGATCAACCGCTACCGCAGTGTCAGGGGGGTGCGAGCTGTCAATGG
CGGTGCTGGTTTTTGTCGTGACTGA

Upstream 100 bases:

>100_bases
TGCCGACCAACGAGGCGATGCTTGCCTATCACCGGCGGTTGGGGCATTCTCTGACCTATTCCGACGAGACCGATACCTAC
CGAATGGAGTACCGATTCAA

Downstream 100 bases:

>100_bases
CAAGTGTGGCCGGGGTGCTTAAGAGGGTTCGGCGGCAATGAGCGGGGAGTTGGGCTTACACCGCGGGGAATTCCCGCAAC
AGGCGGAGGTAATCCTCCTC

Product: Beta-lactamase-like

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Zn-Dependent Hydrolases; Zn-Dependent Hydrolase Glyoxylase; Beta Lactamase; Metallo-Dependent Enzymatic Protein; Zinc Metallohydrolase; Beta-Lactamase Class B; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zinc Metallohydrolase Glyoxalase II Family

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSPEARRIWEEVFSGPLAGEKVV
GVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWPDLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPM
PLSFVRLQDRSHLPLDEEWQVIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT
IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLGDFDLQLALGECLSHVRYLAC
RGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD

Sequences:

>Translated_354_residues
MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSPEARRIWEEVFSGPLAGEKVV
GVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWPDLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPM
PLSFVRLQDRSHLPLDEEWQVIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT
IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLGDFDLQLALGECLSHVRYLAC
RGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD
>Mature_354_residues
MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSPEARRIWEEVFSGPLAGEKVV
GVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWPDLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPM
PLSFVRLQDRSHLPLDEEWQVIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT
IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLGDFDLQLALGECLSHVRYLAC
RGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40034; Mature: 40034

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSP
CEEEEECCCCCCCCCCCEEEECCCCEEEEECCEECCCCEEEEEEEEECCEEEEECCCCCH
EARRIWEEVFSGPLAGEKVVGVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWP
HHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCC
DLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPMPLSFVRLQDRSHLPLDEEWQ
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCE
VIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT
EEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLG
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCC
DFDLQLALGECLSHVRYLACRGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEECCCCCCCCC
>Mature Secondary Structure
MMLSMTFPYSPPHSDGELVEIGPDVRWLRMPVTYAPDHVNIYLVRVAGGWLIVDTGLDSP
CEEEEECCCCCCCCCCCEEEECCCCEEEEECCEECCCCEEEEEEEEECCEEEEECCCCCH
EARRIWEEVFSGPLAGEKVVGVYCTHYHVDHLGLAGYLTERWRVPLFMTYEEYYTLLGWP
HHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCC
DLPQEVPWQHVEFFQRAGFPQELLPQTLVMFDFAREISPMPLSFVRLQDRSHLPLDEEWQ
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCE
VIVGRGHSPEHALLLSKVRKILISGDQLLPSISTNVSVSVMNPEDDPLSHWLASLDRLAT
EEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
IPDDVLVLPGHGLPFRGARKRVAELRGHHRRRSQVIVDACAGSELSAYELVKVLYSFSLG
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCC
DFDLQLALGECLSHVRYLACRGRLEARLDGEGINRYRSVRGVRAVNGGAGFCRD
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA