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The map label for this gene is petC [H]

Identifier: 78223328

GI number: 78223328

Start: 2389537

End: 2390055

Strand: Direct

Name: petC [H]

Synonym: Gmet_2121

Alternate gene names: 78223328

Gene position: 2389537-2390055 (Clockwise)

Preceding gene: 78223327

Following gene: 78223329

Centisome position: 59.78

GC content: 60.12

Gene sequence:

>519_bases
ATGAGTTCCGAAAACAGCACCGGCGCAACGATTCTCCCCTTCAGAACCTCCGATGACGTGGTGGACGAGGATCGCAGAGG
CTTCGTGAAAAAGATGGCGCTGACGGCCCTCACCGTGGGAGTCGGGGGAGCTGCCATCCAGAGCGCCCGTTTCTTCAAGC
CCAATGTGCTCTACGAGCCCTCAAAGGCTTTCAAGGTGGGCGAGCTGAGCAAGTTCCCCATCGGAAGCCGCATCGTCATC
GAAGGCCGGGGGATCGAGATCGTCAGAGAACGGGACGGCATGCACGCCATATCCCTTGTCTGCACCCACCTGGGATGCCT
CATAAAGCCCGTGGAGAACGACCCCGACACCGGGTACATGTGCCCCTGCCACGGCTCCACCTTTACCCTTACGGGTGGAG
TTCTAGGGGGCCCCGCCCCGAAGGATCTCCCCTGGTACGAGATGTACATGGACAATACCGGGGCTCTCGTGGTGGACACG
TCCAAGGTGAACCACAAACGGACCAAACTCGCAGTCTGA

Upstream 100 bases:

>100_bases
TCTTATCGTAATCGGACAGTTCCTGCGGGGACCGAACTGGCATCTGTACCTGCCGTGGCAATGACACGTTGAAACAACAC
CCCTTGAAAGGAGAAGTGAT

Downstream 100 bases:

>100_bases
GACAGGAGCAAACCCATGGAGGATAAGCAGATGGAAAAGGCAGTTTCACGCAAGCTTACATTATTCTGCGTCATCTGCGG
GCTGGCCGTACTGGTCCTTA

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSSENSTGATILPFRTSDDVVDEDRRGFVKKMALTALTVGVGGAAIQSARFFKPNVLYEPSKAFKVGELSKFPIGSRIVI
EGRGIEIVRERDGMHAISLVCTHLGCLIKPVENDPDTGYMCPCHGSTFTLTGGVLGGPAPKDLPWYEMYMDNTGALVVDT
SKVNHKRTKLAV

Sequences:

>Translated_172_residues
MSSENSTGATILPFRTSDDVVDEDRRGFVKKMALTALTVGVGGAAIQSARFFKPNVLYEPSKAFKVGELSKFPIGSRIVI
EGRGIEIVRERDGMHAISLVCTHLGCLIKPVENDPDTGYMCPCHGSTFTLTGGVLGGPAPKDLPWYEMYMDNTGALVVDT
SKVNHKRTKLAV
>Mature_171_residues
SSENSTGATILPFRTSDDVVDEDRRGFVKKMALTALTVGVGGAAIQSARFFKPNVLYEPSKAFKVGELSKFPIGSRIVIE
GRGIEIVRERDGMHAISLVCTHLGCLIKPVENDPDTGYMCPCHGSTFTLTGGVLGGPAPKDLPWYEMYMDNTGALVVDTS
KVNHKRTKLAV

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805 [H]

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske [H]

EC number: =1.10.99.1 [H]

Molecular weight: Translated: 18591; Mature: 18459

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSENSTGATILPFRTSDDVVDEDRRGFVKKMALTALTVGVGGAAIQSARFFKPNVLYEP
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCEEECC
SKAFKVGELSKFPIGSRIVIEGRGIEIVRERDGMHAISLVCTHLGCLIKPVENDPDTGYM
CCCEECCCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEECCCCCCCCEE
CPCHGSTFTLTGGVLGGPAPKDLPWYEMYMDNTGALVVDTSKVNHKRTKLAV
EECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure 
SSENSTGATILPFRTSDDVVDEDRRGFVKKMALTALTVGVGGAAIQSARFFKPNVLYEP
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCEEECC
SKAFKVGELSKFPIGSRIVIEGRGIEIVRERDGMHAISLVCTHLGCLIKPVENDPDTGYM
CCCEECCCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEECCCCCCCCEE
CPCHGSTFTLTGGVLGGPAPKDLPWYEMYMDNTGALVVDTSKVNHKRTKLAV
EECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA