| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223327
Identifier: 78223327
GI number: 78223327
Start: 2388979
End: 2389500
Strand: Direct
Name: 78223327
Synonym: Gmet_2120
Alternate gene names: NA
Gene position: 2388979-2389500 (Clockwise)
Preceding gene: 78223326
Following gene: 78223328
Centisome position: 59.76
GC content: 59.58
Gene sequence:
>522_bases ATGCAAGCAGCTAAAAAAGAAGAGATATTCCCGAAGGACCCCAACAAGACCTATTCCCTGATGGCAATCGTCGACGGCGA CTCCTTCCAGGTGGAAAAGGGTCCCGAAGACACGGTGCAGAGCTGGCCGCACCTCATGGTGCGCGAGCTGGGGCTGTTCC TGCTGGTCCTCGCCGTGATCATGGGTGTTTCCCTCATCTTCAACGCCCCCCTGGAGGAAGCGGCCAATCCCCAGCACTCC ACCAACCCGGCCAAGGCCCCCTGGTATTTCGTCGGCATCCAGGAACTGGTGAGCTATTCGGCACTTCTGGGGGGGATCGT AACCCCGGCCATCATCGTGGTCACGCTTCTGCTCCTCCCCTATCTGGACCGGAACCCCAAGGGGACCGGCGTCTGGTTTT CCCGGGACCGGCGGGTCGCCACTATCCTGTTCACCGTCTTTGTCGTAGCCATGCTCATTCTTATCGTAATCGGACAGTTC CTGCGGGGACCGAACTGGCATCTGTACCTGCCGTGGCAATGA
Upstream 100 bases:
>100_bases GAGTTCACTTCTGGAGGATCCGCAAGGACGGTGGCCTGTCACGGCCCAGGAACGACTGAGTCCGGCAGGAGACGCGAGAG ACAACTGAGGAGGTTCAGAC
Downstream 100 bases:
>100_bases CACGTTGAAACAACACCCCTTGAAAGGAGAAGTGATATGAGTTCCGAAAACAGCACCGGCGCAACGATTCTCCCCTTCAG AACCTCCGATGACGTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Menaquinol-Cytochrome C Reductase; Cytochrome B/B6-Like
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MQAAKKEEIFPKDPNKTYSLMAIVDGDSFQVEKGPEDTVQSWPHLMVRELGLFLLVLAVIMGVSLIFNAPLEEAANPQHS TNPAKAPWYFVGIQELVSYSALLGGIVTPAIIVVTLLLLPYLDRNPKGTGVWFSRDRRVATILFTVFVVAMLILIVIGQF LRGPNWHLYLPWQ
Sequences:
>Translated_173_residues MQAAKKEEIFPKDPNKTYSLMAIVDGDSFQVEKGPEDTVQSWPHLMVRELGLFLLVLAVIMGVSLIFNAPLEEAANPQHS TNPAKAPWYFVGIQELVSYSALLGGIVTPAIIVVTLLLLPYLDRNPKGTGVWFSRDRRVATILFTVFVVAMLILIVIGQF LRGPNWHLYLPWQ >Mature_173_residues MQAAKKEEIFPKDPNKTYSLMAIVDGDSFQVEKGPEDTVQSWPHLMVRELGLFLLVLAVIMGVSLIFNAPLEEAANPQHS TNPAKAPWYFVGIQELVSYSALLGGIVTPAIIVVTLLLLPYLDRNPKGTGVWFSRDRRVATILFTVFVVAMLILIVIGQF LRGPNWHLYLPWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19361; Mature: 19361
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS51003 CYTB_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAAKKEEIFPKDPNKTYSLMAIVDGDSFQVEKGPEDTVQSWPHLMVRELGLFLLVLAVI CCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH MGVSLIFNAPLEEAANPQHSTNPAKAPWYFVGIQELVSYSALLGGIVTPAIIVVTLLLLP HHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLDRNPKGTGVWFSRDRRVATILFTVFVVAMLILIVIGQFLRGPNWHLYLPWQ HHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC >Mature Secondary Structure MQAAKKEEIFPKDPNKTYSLMAIVDGDSFQVEKGPEDTVQSWPHLMVRELGLFLLVLAVI CCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH MGVSLIFNAPLEEAANPQHSTNPAKAPWYFVGIQELVSYSALLGGIVTPAIIVVTLLLLP HHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLDRNPKGTGVWFSRDRRVATILFTVFVVAMLILIVIGQFLRGPNWHLYLPWQ HHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA