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The map label for this gene is petB [H]

Identifier: 78223326

GI number: 78223326

Start: 2388194

End: 2388937

Strand: Direct

Name: petB [H]

Synonym: Gmet_2119

Alternate gene names: 78223326

Gene position: 2388194-2388937 (Clockwise)

Preceding gene: 78223325

Following gene: 78223327

Centisome position: 59.74

GC content: 60.35

Gene sequence:

>744_bases
ATGAGTGAATCAGCCTACAGCATTACAGAAGCCATCCGGCAACTTCCAAGAAACATCAAGGCGTCCATCTCCCGCCGCGG
AGAAGGAACCGTGGAACAGGAACAGGCCGCGGCGGTATTCGGCAACATGTTCCTCCATCTCCATCCGGTGCGGGTCCATG
TGAACTCCCTGCGCGCGGGATACACCTTCGGGCTGGGACTGATCTCCTTCTACCTCTTTCTCATCCTGGTCGCCTCGGGG
CTGCTGCTGATGTTCTATTACACCCCCTCCACCGAGCTGGCCTACCGGAACATGAAAGACCTCGAATACGTCGTCACCTT
CGGCGTGATCCTGCGCAACGTCCACCGCTGGTCGGCCCATGCCATGGTCGCCTTTGTCTTCCTCCACATGTGCCGGGTCT
TCTATACCGGCTCCTACAAGGCTCCCCGTGAATTCAACTGGGTCATCGGCGTCTTCCTGCTGCTCGTGACGCTCTTCCTG
AGCTTTACCGGCTACCTCCTCCCCTGGGATCAGCTGGCCTTCTGGGCCGTTACCGTCGGCTCCAATATCGCCGGCTACAT
GCCCGTACTCGGGGATTACATCCGCTTCCTGATGCTGGGGGGGAATGAGGTCGGCCAGATGGCGCTCCTGCGGTTCTACG
TGCTGCACGTGGTGGCGCTCCCTCTCCTTGCCGCCACCCTGCTGGGAGTTCACTTCTGGAGGATCCGCAAGGACGGTGGC
CTGTCACGGCCCAGGAACGACTGA

Upstream 100 bases:

>100_bases
TGTGCGCCCGACGCTGCCCCGGCGGAGCCATAACCATGGCCGAGTTCTACTGCCAAGAGGAATGGGAATAACCAACAACC
TGAGTACGCGGAGACCAATC

Downstream 100 bases:

>100_bases
GTCCGGCAGGAGACGCGAGAGACAACTGAGGAGGTTCAGACATGCAAGCAGCTAAAAAAGAAGAGATATTCCCGAAGGAC
CCCAACAAGACCTATTCCCT

Product: cytochrome b/b6-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSESAYSITEAIRQLPRNIKASISRRGEGTVEQEQAAAVFGNMFLHLHPVRVHVNSLRAGYTFGLGLISFYLFLILVASG
LLLMFYYTPSTELAYRNMKDLEYVVTFGVILRNVHRWSAHAMVAFVFLHMCRVFYTGSYKAPREFNWVIGVFLLLVTLFL
SFTGYLLPWDQLAFWAVTVGSNIAGYMPVLGDYIRFLMLGGNEVGQMALLRFYVLHVVALPLLAATLLGVHFWRIRKDGG
LSRPRND

Sequences:

>Translated_247_residues
MSESAYSITEAIRQLPRNIKASISRRGEGTVEQEQAAAVFGNMFLHLHPVRVHVNSLRAGYTFGLGLISFYLFLILVASG
LLLMFYYTPSTELAYRNMKDLEYVVTFGVILRNVHRWSAHAMVAFVFLHMCRVFYTGSYKAPREFNWVIGVFLLLVTLFL
SFTGYLLPWDQLAFWAVTVGSNIAGYMPVLGDYIRFLMLGGNEVGQMALLRFYVLHVVALPLLAATLLGVHFWRIRKDGG
LSRPRND
>Mature_246_residues
SESAYSITEAIRQLPRNIKASISRRGEGTVEQEQAAAVFGNMFLHLHPVRVHVNSLRAGYTFGLGLISFYLFLILVASGL
LLMFYYTPSTELAYRNMKDLEYVVTFGVILRNVHRWSAHAMVAFVFLHMCRVFYTGSYKAPREFNWVIGVFLLLVTLFLS
FTGYLLPWDQLAFWAVTVGSNIAGYMPVLGDYIRFLMLGGNEVGQMALLRFYVLHVVALPLLAATLLGVHFWRIRKDGGL
SRPRND

Specific function: Component of the cytochrome bc complex which donates electrons to the photosynthetic reaction center [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family. PetB subfamily [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=164, Percent_Identity=32.3170731707317, Blast_Score=92, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6226532, Length=172, Percent_Identity=28.4883720930233, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6226529, Length=171, Percent_Identity=29.2397660818713, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6226531, Length=142, Percent_Identity=28.8732394366197, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 28042; Mature: 27911

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure 
SESAYSITEAIRQLPRNIKASISRRGEGTVEQEQAAAVFGNMFLHLHPVRVHVNSLRAG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHCH
YTFGLGLISFYLFLILVASGLLLMFYYTPSTELAYRNMKDLEYVVTFGVILRNVHRWSAH
HHHHHHHHHHHHHHHHHHHHHHEEHEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AMVAFVFLHMCRVFYTGSYKAPREFNWVIGVFLLLVTLFLSFTGYLLPWDQLAFWAVTVG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
SNIAGYMPVLGDYIRFLMLGGNEVGQMALLRFYVLHVVALPLLAATLLGVHFWRIRKDGG
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
LSRPRND
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA