| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is cat2 [H]
Identifier: 78223261
GI number: 78223261
Start: 2306454
End: 2307779
Strand: Reverse
Name: cat2 [H]
Synonym: Gmet_2054
Alternate gene names: 78223261
Gene position: 2307779-2306454 (Counterclockwise)
Preceding gene: 78223262
Following gene: 78223260
Centisome position: 57.73
GC content: 58.6
Gene sequence:
>1326_bases ATGAACGTCGTCACACTGAGCAAAAAGAATTTCCAGCAGGAATACCAGCAGAAACTCTGCACAGCGGCAGAAGCGGCATC AATCGTGAGGTCCGGCGATCACCTCTGTTTCCCCCTCGGCGTGGGTGAGCCGACCCTCTTCGTCAGGGCACTGGCGGCGC GCAAGCGCGAACTGGAAGGTGTGGTTGTCAACCAGCAGCATCACCTCTGTCCCGACTATTTCACCGAGGATTCGGCCCCG CACATCAAGGTGAACGCATGGTTCACCAGCCACGTCTCCCGCGAGGCGGTCCAGAAAGGGTGGGCCGACTTCGTTCCCAA TCACTTCAGCGAGGTCCCCAAGCTTCTGAGCATGTATTGGCCCGTCGAAGTGGCCGGAACCGTGGTTTCCCCCATGGATG AGTATGGCTACTTCACCTGTAGCCTCTCCGTGGGCTACACCATGGAAGCGGTGAGGAAAGCGATTCAGACCGGCGGCAAG GTGGTGGTGCAGGTGAATCCCCAGTGCCCCCGCACCCACGGCAACTGTCATATCCACATCTCCGAAGTTACCCATATCAT CGAGTGCGACGAGCCCCTCAAGGAACTGGATATTCCCCCCATATCCCCGATAGAAGAGGCCATCGGCGGCTATATTGCGG AAATGATCGATGACGGATCAACCGTCCAGATGGGGTGGGGCGGCATTCCCAACGCGGTCTGCCAGGCATTGCTCAAGAAG AAGGACCTGGGAATACACACCGAACTGATTTCCAACGGCATCGTTGACCTGATGCTTGCCGGAGCGGTAAACAACTCCCG CAAAAGCATCCACCGCGGCAAGACCGTGGGCACCTTTGCTCTGGGGACACGGAAAGTTTTCGATTTTATGAATGAAAACC CGACGATCGAGATGCATCCGGTGGACTACGTTAACGATCCGTACGTCATCGGCCAGATGGACAACATGATCGCCATCAAC GCCACCATCCAGGTGGATCTGTTGGGGCAGTGCTGCTCCGAATCCTTCGGCCACCTGCAGTGGAGCGGCACCGGCGGACA GGCCGACTTTGCCCGCGGCGCCAACCGGTCCCGTGGGGGCAAGGCCTTCATCTGTACGGCGTCCACCGCCAAGAACGGAA CGGTTTCGTGCATCGTGCCGAGCCTGATGGCCGGTTCTTCGGTCACCACCAGCAAGAACGACGTGGATCACGTGGTGACC GAGTTCGGAGTTGCCAAACTCCGGGGCCAGACCGCCAAGCAGCGGGCCATGAACCTGATCAATGTTGCCCATCCCGATTT CCGGGGCGAGCTCATGGAAGCAGCCAGGAGAATGAACAGAATCTGA
Upstream 100 bases:
>100_bases GCTGAAATCGGTGCTGAAATGAAATCTCCCGTAAATCATGGGCAGGTTGCCGGAATAGCTCTTCAAACCACAGACTAAAT TCACTATGGAGGTATCGGCC
Downstream 100 bases:
>100_bases ACATAAACACGATTTGGCCTGGTACCCTCCCGGACTGGGACCGGCACCGTACGCCCGGAAGCAACTTTTCCTCGGCGTAC GGTGCATTTTTTTTTCAGAA
Product: Acetyl-CoA hydrolase/transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MNVVTLSKKNFQQEYQQKLCTAAEAASIVRSGDHLCFPLGVGEPTLFVRALAARKRELEGVVVNQQHHLCPDYFTEDSAP HIKVNAWFTSHVSREAVQKGWADFVPNHFSEVPKLLSMYWPVEVAGTVVSPMDEYGYFTCSLSVGYTMEAVRKAIQTGGK VVVQVNPQCPRTHGNCHIHISEVTHIIECDEPLKELDIPPISPIEEAIGGYIAEMIDDGSTVQMGWGGIPNAVCQALLKK KDLGIHTELISNGIVDLMLAGAVNNSRKSIHRGKTVGTFALGTRKVFDFMNENPTIEMHPVDYVNDPYVIGQMDNMIAIN ATIQVDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFICTASTAKNGTVSCIVPSLMAGSSVTTSKNDVDHVVT EFGVAKLRGQTAKQRAMNLINVAHPDFRGELMEAARRMNRI
Sequences:
>Translated_441_residues MNVVTLSKKNFQQEYQQKLCTAAEAASIVRSGDHLCFPLGVGEPTLFVRALAARKRELEGVVVNQQHHLCPDYFTEDSAP HIKVNAWFTSHVSREAVQKGWADFVPNHFSEVPKLLSMYWPVEVAGTVVSPMDEYGYFTCSLSVGYTMEAVRKAIQTGGK VVVQVNPQCPRTHGNCHIHISEVTHIIECDEPLKELDIPPISPIEEAIGGYIAEMIDDGSTVQMGWGGIPNAVCQALLKK KDLGIHTELISNGIVDLMLAGAVNNSRKSIHRGKTVGTFALGTRKVFDFMNENPTIEMHPVDYVNDPYVIGQMDNMIAIN ATIQVDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFICTASTAKNGTVSCIVPSLMAGSSVTTSKNDVDHVVT EFGVAKLRGQTAKQRAMNLINVAHPDFRGELMEAARRMNRI >Mature_441_residues MNVVTLSKKNFQQEYQQKLCTAAEAASIVRSGDHLCFPLGVGEPTLFVRALAARKRELEGVVVNQQHHLCPDYFTEDSAP HIKVNAWFTSHVSREAVQKGWADFVPNHFSEVPKLLSMYWPVEVAGTVVSPMDEYGYFTCSLSVGYTMEAVRKAIQTGGK VVVQVNPQCPRTHGNCHIHISEVTHIIECDEPLKELDIPPISPIEEAIGGYIAEMIDDGSTVQMGWGGIPNAVCQALLKK KDLGIHTELISNGIVDLMLAGAVNNSRKSIHRGKTVGTFALGTRKVFDFMNENPTIEMHPVDYVNDPYVIGQMDNMIAIN ATIQVDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFICTASTAKNGTVSCIVPSLMAGSSVTTSKNDVDHVVT EFGVAKLRGQTAKQRAMNLINVAHPDFRGELMEAARRMNRI
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=475, Percent_Identity=24, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32563853, Length=434, Percent_Identity=37.7880184331797, Blast_Score=261, Evalue=6e-70, Organism=Caenorhabditis elegans, GI17538151, Length=433, Percent_Identity=34.1801385681293, Blast_Score=236, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6319456, Length=262, Percent_Identity=28.6259541984733, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI21358615, Length=420, Percent_Identity=40.2380952380952, Blast_Score=280, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 48173; Mature: 48173
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVVTLSKKNFQQEYQQKLCTAAEAASIVRSGDHLCFPLGVGEPTLFVRALAARKRELEG CCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCC VVVNQQHHLCPDYFTEDSAPHIKVNAWFTSHVSREAVQKGWADFVPNHFSEVPKLLSMYW EEECCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHC PVEVAGTVVSPMDEYGYFTCSLSVGYTMEAVRKAIQTGGKVVVQVNPQCPRTHGNCHIHI CHHHHHHHHCCHHHCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEH SEVTHIIECDEPLKELDIPPISPIEEAIGGYIAEMIDDGSTVQMGWGGIPNAVCQALLKK HHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH KDLGIHTELISNGIVDLMLAGAVNNSRKSIHRGKTVGTFALGTRKVFDFMNENPTIEMHP CCCCHHHHHHHCCHHHHHHHHCCCCCHHHHHCCCCEEEEEHHHHHHHHHHCCCCCEEECC VDYVNDPYVIGQMDNMIAINATIQVDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGG CCCCCCCEEEECCCCEEEEEEEEEEEHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCC KAFICTASTAKNGTVSCIVPSLMAGSSVTTSKNDVDHVVTEFGVAKLRGQTAKQRAMNLI CEEEEEECCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH NVAHPDFRGELMEAARRMNRI HHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNVVTLSKKNFQQEYQQKLCTAAEAASIVRSGDHLCFPLGVGEPTLFVRALAARKRELEG CCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCC VVVNQQHHLCPDYFTEDSAPHIKVNAWFTSHVSREAVQKGWADFVPNHFSEVPKLLSMYW EEECCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHC PVEVAGTVVSPMDEYGYFTCSLSVGYTMEAVRKAIQTGGKVVVQVNPQCPRTHGNCHIHI CHHHHHHHHCCHHHCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEH SEVTHIIECDEPLKELDIPPISPIEEAIGGYIAEMIDDGSTVQMGWGGIPNAVCQALLKK HHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH KDLGIHTELISNGIVDLMLAGAVNNSRKSIHRGKTVGTFALGTRKVFDFMNENPTIEMHP CCCCHHHHHHHCCHHHHHHHHCCCCCHHHHHCCCCEEEEEHHHHHHHHHHCCCCCEEECC VDYVNDPYVIGQMDNMIAINATIQVDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGG CCCCCCCEEEECCCCEEEEEEEEEEEHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCC KAFICTASTAKNGTVSCIVPSLMAGSSVTTSKNDVDHVVTEFGVAKLRGQTAKQRAMNLI CEEEEEECCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH NVAHPDFRGELMEAARRMNRI HHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]