| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223248
Identifier: 78223248
GI number: 78223248
Start: 2284638
End: 2285858
Strand: Reverse
Name: 78223248
Synonym: Gmet_2041
Alternate gene names: NA
Gene position: 2285858-2284638 (Counterclockwise)
Preceding gene: 78223249
Following gene: 78223247
Centisome position: 57.18
GC content: 45.7
Gene sequence:
>1221_bases ATGCGAATTCTTGCCTTCCCCTATACTCATACACTGTCTCATCTCAGCCGCGTTCTGGCAGTCGCTCTTGAGTTACGAAG GATGGGCCATGAGGTAGTTTTTGCCGGCGAGAGCGCCAAGGTTTCATTTGTATCGCAGCAGGGCTTCGATGTGGTACCCA TTCATGAACCTGATCCTGAGATGCTTTTTGGCAACATTCGTTCCGGTAAGCTTCGATTTGTTGAAGATGCCGAACTGTTG CAAATGCTGACGGCAGATATAGAGGTAATTAGGTCCTTGAAACCTGATTTGGTGCTTTCAGACGGTAGATTCAGTGCGCC CTTGTCTACTCATCTGACCAATGTCAGGCACGCTGCTATTGTGAATGCTTCATCAACGGAGTACCGAGCACTCCCCTATG TGCCTTTTTTTGATTGGATGCCCCCCTGGCTGATTAGTCGCGATGCGATGATCTGGAAAGCATTGGTCCGGCTGAATCTT TTTCTCGAAATGAAGTTGTTTGACAATGTTATGAAGGTATTCAAGAGGTTAAGCCGGGAATTGAACACAAACCGAACTGT TACGGCGACAAATTGCCTTACTGGAAAGGATATAACACTCCTTGCGGATATTCCGGAGTATTTCCCATCGCGTAATCTGC CGGCTTCTTATCATTATGTGGGACCATTAACCTGGAAAAGTGTTCTTGCTCCCCCGGCATGGTGGCCGCTTGATATTCCT TCATCTCCGCTGGTTTATGTGACAATGGGCACAACGGGAGTTTCCGAATTTTTTTCAAAACTTGGCCCAAGTCTCTCTAC ATCTTTTTTTTCGTCAATTGTAACCACTGGTGGCCAATCATCAGAGCTCAAGCCGATGCCAGGAAAGGTTTATGTGGAAA GTTACCTCGATGGCGATCTGGTCATGGAGCGTAGTGATGTTGTAATTTGTCATGGAGGCAATGGCACCATATACCAGGCT CTTTCTCACGGCAAGCCAGTGATCGGCATTCCAACCATACCTGATCAAAAATTCAATATGCGCCGTGTTGAGGCAATGGG ATTTGGAAAGTCACTTGACTTAAAACAATTTTTGGAAAAGCCATCATTGCTTGCTGACACGGTTAAACAAGTACTGTCTG ATCATTCGTTCCGAAATAGTGCCCAAAAAATTCAAGCTGTCCTGAAATCTTATAATGCTGCAACCACCAGCGCCAAAATT CTCATTGATAGCATTTTATAG
Upstream 100 bases:
>100_bases GCGAAAAAATAACATTTTCTTCAGTTTCTGTGGAATAAAAAGGGCTCTCGATTGAGAGCCCTTTTTATTTTCTATTTATG TGCTATGATAAATTTAAATT
Downstream 100 bases:
>100_bases GGTCTCCATGAATACTTCAGAAAATAAATTCTCCATACTATCTTCAAATCGGATTGTAAAAGCATTTTGGACTCTCAATG ACGAGATGAAGCCTGCCTAT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRILAFPYTHTLSHLSRVLAVALELRRMGHEVVFAGESAKVSFVSQQGFDVVPIHEPDPEMLFGNIRSGKLRFVEDAELL QMLTADIEVIRSLKPDLVLSDGRFSAPLSTHLTNVRHAAIVNASSTEYRALPYVPFFDWMPPWLISRDAMIWKALVRLNL FLEMKLFDNVMKVFKRLSRELNTNRTVTATNCLTGKDITLLADIPEYFPSRNLPASYHYVGPLTWKSVLAPPAWWPLDIP SSPLVYVTMGTTGVSEFFSKLGPSLSTSFFSSIVTTGGQSSELKPMPGKVYVESYLDGDLVMERSDVVICHGGNGTIYQA LSHGKPVIGIPTIPDQKFNMRRVEAMGFGKSLDLKQFLEKPSLLADTVKQVLSDHSFRNSAQKIQAVLKSYNAATTSAKI LIDSIL
Sequences:
>Translated_406_residues MRILAFPYTHTLSHLSRVLAVALELRRMGHEVVFAGESAKVSFVSQQGFDVVPIHEPDPEMLFGNIRSGKLRFVEDAELL QMLTADIEVIRSLKPDLVLSDGRFSAPLSTHLTNVRHAAIVNASSTEYRALPYVPFFDWMPPWLISRDAMIWKALVRLNL FLEMKLFDNVMKVFKRLSRELNTNRTVTATNCLTGKDITLLADIPEYFPSRNLPASYHYVGPLTWKSVLAPPAWWPLDIP SSPLVYVTMGTTGVSEFFSKLGPSLSTSFFSSIVTTGGQSSELKPMPGKVYVESYLDGDLVMERSDVVICHGGNGTIYQA LSHGKPVIGIPTIPDQKFNMRRVEAMGFGKSLDLKQFLEKPSLLADTVKQVLSDHSFRNSAQKIQAVLKSYNAATTSAKI LIDSIL >Mature_406_residues MRILAFPYTHTLSHLSRVLAVALELRRMGHEVVFAGESAKVSFVSQQGFDVVPIHEPDPEMLFGNIRSGKLRFVEDAELL QMLTADIEVIRSLKPDLVLSDGRFSAPLSTHLTNVRHAAIVNASSTEYRALPYVPFFDWMPPWLISRDAMIWKALVRLNL FLEMKLFDNVMKVFKRLSRELNTNRTVTATNCLTGKDITLLADIPEYFPSRNLPASYHYVGPLTWKSVLAPPAWWPLDIP SSPLVYVTMGTTGVSEFFSKLGPSLSTSFFSSIVTTGGQSSELKPMPGKVYVESYLDGDLVMERSDVVICHGGNGTIYQA LSHGKPVIGIPTIPDQKFNMRRVEAMGFGKSLDLKQFLEKPSLLADTVKQVLSDHSFRNSAQKIQAVLKSYNAATTSAKI LIDSIL
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI270132420, Length=101, Percent_Identity=36.6336633663366, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI270132412, Length=101, Percent_Identity=36.6336633663366, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 45211; Mature: 45211
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILAFPYTHTLSHLSRVLAVALELRRMGHEVVFAGESAKVSFVSQQGFDVVPIHEPDPE CEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEECCCCCHH MLFGNIRSGKLRFVEDAELLQMLTADIEVIRSLKPDLVLSDGRFSAPLSTHLTNVRHAAI HEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHEEE VNASSTEYRALPYVPFFDWMPPWLISRDAMIWKALVRLNLFLEMKLFDNVMKVFKRLSRE EECCCCCCEECCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNTNRTVTATNCLTGKDITLLADIPEYFPSRNLPASYHYVGPLTWKSVLAPPAWWPLDIP HCCCCEEEEEECCCCCCEEEEECCHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCC SSPLVYVTMGTTGVSEFFSKLGPSLSTSFFSSIVTTGGQSSELKPMPGKVYVESYLDGDL CCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCE VMERSDVVICHGGNGTIYQALSHGKPVIGIPTIPDQKFNMRRVEAMGFGKSLDLKQFLEK EEECCCEEEEECCCCCEEHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHCC PSLLADTVKQVLSDHSFRNSAQKIQAVLKSYNAATTSAKILIDSIL CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MRILAFPYTHTLSHLSRVLAVALELRRMGHEVVFAGESAKVSFVSQQGFDVVPIHEPDPE CEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEECCCCCHH MLFGNIRSGKLRFVEDAELLQMLTADIEVIRSLKPDLVLSDGRFSAPLSTHLTNVRHAAI HEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHEEE VNASSTEYRALPYVPFFDWMPPWLISRDAMIWKALVRLNLFLEMKLFDNVMKVFKRLSRE EECCCCCCEECCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNTNRTVTATNCLTGKDITLLADIPEYFPSRNLPASYHYVGPLTWKSVLAPPAWWPLDIP HCCCCEEEEEECCCCCCEEEEECCHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCC SSPLVYVTMGTTGVSEFFSKLGPSLSTSFFSSIVTTGGQSSELKPMPGKVYVESYLDGDL CCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCE VMERSDVVICHGGNGTIYQALSHGKPVIGIPTIPDQKFNMRRVEAMGFGKSLDLKQFLEK EEECCCEEEEECCCCCEEHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHCC PSLLADTVKQVLSDHSFRNSAQKIQAVLKSYNAATTSAKILIDSIL CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA