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The map label for this gene is 78223239

Identifier: 78223239

GI number: 78223239

Start: 2274011

End: 2276662

Strand: Reverse

Name: 78223239

Synonym: Gmet_2032

Alternate gene names: NA

Gene position: 2276662-2274011 (Counterclockwise)

Preceding gene: 78223240

Following gene: 78223238

Centisome position: 56.95

GC content: 53.92

Gene sequence:

>2652_bases
TTGTTTAACAGACGTATTGCACTGATTTGTCTTATTGTGGCGACTCTTTCCGCTTGTGGGGGGAAAACGAAGGAAGAGCT
CTACGCCGAGGCAGTTAAGGAACTGGACAAGGGCAACGCCAATGGAGCGATTGTTCTTCTGAAAAATGCCGTTGAAAAAG
ATCAAAATTATTTCGACGCCCGTTACAAGCTTGCGAAGGCCTACATGACAGTGGGCAAATTCGAACAGGCGGAAAAAGAG
TTCCAGAAAGCACTCCGGCAAAATCCGTCCAATCCGGAGATAAGGCTTGATCTGGCAAAACTCTACAATTCAATCAACAA
GCCTGACGAGTCAATAGCTGAGGCCAAGGCGTATCTCTCCGCACGGGCCGGATCGGCGGATGCCCTGGAAGTGATTGGCA
CGAGCTACGGCCAAAAGAAGATGTTCGATGAGGCCGAGAAATACTTGAAGGAGTCTCTCCAGGCTGAACCTGCCCGTGCT
TCGGCAATGCTGCAATTGGCAAAGGTTTATCTGGCGACGAAGCGGGAGCAGGAAGGGATGGGGCTCCTCAACGAGATCGT
TCGGAAAGACCCTAAAAACACCAAAGCATACTATCTTGCCGCCTTCTATGAAGGATATCGCGGCAACAGTGAAAAGGCCC
TTGAATACTACCAAAAGATCATGCAGGCGGATCCCGATGATGCCAATGCGGCCTTCAGGATTGGCATGATGCATATCAGC
AAGGGTGAAGTGGACAAGGCTGAACGCCTTGCCGATGACCTGATCAGGAAAGCGTCCAAACGGCCGGAAGGACACCAACT
TAAGGGGATTGCTCTCTATACCAGGAAAAACTACGACCAGGCAATCACCGAACTTCAAGGTGTCGTGAAAAACTATCAAA
ATCCCGGTGCCTACTACTATCTGGGCTTGAGTTACTATCAACGCAACGATCTTGAGAGCGCCCTGAGCCAGTTCCGCAAA
GTGATTGACCTCAACCCGAAGCATCTGCAGGCCCGGCTCATGTCCGCGACGGTTCTGCTTCAGCAGAAACGCACCGATGA
TGCCATCACCGAGGCCAAACGAGTCATTGAGCTGGACGACAAGAATGCCTTTGCCCATAACGTCCTCGGCAGCGCCTACA
TTGCCAAGGGGATGACTGACGAGGCAGTCAGGGAGCTCAACCGCGCGATCGAGCTTGAGCCGAAGCTGGTCGGTGCCCAC
ATGAAGAAGGGGATCGTTAACCTGGCGCGCGGAAAGAGGGCGGAAGGCGAGGAAGAGCTTGAAACGGCAGTGAAGGTCGC
TCCCGATGTTCTCAATAGCCGGTATCTGCTGGCAAGCTACTACATGCGCCTGAACAAACAGGCCCGTGCCATCGAGGTGC
TCAGGGCGGGGCTGAGGGGAGGCAAGCAGGATGCTCCTCTCTACAATACAATGGCCGCTGCCGCCTTCGCCGACAAGCGG
GAGAAGGATGGCATTTTGTATCTTCAAAAGGCGCGGGAAGTCGATCAGGCATATCTCCCGGCTTCCTTCAACCTGGCATC
CTATTACATCAGCAAAAAGGACAATGGGCGCGCAGCCGGCTTGTTCAACGAGATCCTGAAGCGTGATCCGGCCAACCTCA
AGGCGTTGATCGGCCTCGGTGCCATCAGCGAATCGGAGGGGAAGGCGCAGGAGGCAGTCGCCTACTATACCAAGGCCAAG
GCAACGAAGGACCCCGTCGGCTATCTCTCTCTTGCATCCTACTACATCAGGAAAAAGGAGGCGCCCAAAGCCCTTGCTTT
AGCAAACGAGGGGTTGAAGGGGGCTCCGAACAATGCTGCGCTACTGGAGTTGAAGGGTGGACTTCTCGCAGCCGATAAAA
AGTACGCGGAGGCCCTCAAAGTCTATGATGAGCTGGAAAAGGTCGCCCCGACCCGTGCGATTCCGCTGAAAATCGGAGCC
TTGGTGGTAACCAAAAACATTCCCAAGGCCGTGGAGCAGGCACAGAAGGTTGTCGCAGCCAACCCCAAGTCTGCGGCCGG
GCATCTTGTTATTGCGTCGATCTACGAGAGCCAGAAAGACTATGACCGTGCCATTTCGGCTGTCAGAAGCGGCATAGCAG
TTGAGCCCGGCAATCTCCGGGCGTCCATGGCCTTAGGCGGGATCTACGAGAAGAAACGGGATTTTGCCAGAGCTATTGCC
GCCTATGACGATATCCTCAGGAAGAATCCCAAGAATATTCCTGCCCTGTTTGCCAAAGGAGCGGCTTTCGATCAATCGGG
CAAGAAAAAAGAAGCTGCCGGTATCTATCGGGCCGTACTTAAAATAGCGCCTGATTTTGTACCCGCACTTAATAACCTGG
CATATCTTGCTGCCGAAGGATATGGAAACAAGTCAGAGGCGTTGTCCCTGGCCAGTCGGGCAAACAAGCTCCAACCCAAT
AACGCCGGGGTCATGGATACCTACGGCTATGCGCTGCTGATTAACGGCAAGAGGACCGCATCGGTCAGAGTGCTCGAAAA
GGCAGTCTCTCTCCTTCCGAACAACCCCGCCGTGCACTATCACCTTGCCATGGCTTATCGTGACATGGGTGACAGGGCAA
AGGCCAGCGTCAGTGTCCAGAAATCTCTTCAATATGGGGAATTCCCCGAAAGTGCCGCGGCAAGGAAACTTCTTGCCGAA
CTGAAGCGCTAG

Upstream 100 bases:

>100_bases
AATTCCATCTGCATGATCAAACCTCTTGATTACAAAAAGTTTACATCTGTCGTACGACAAATGATGACCGGTACTTATGC
TGGTCAGGGAGGATACAGCA

Downstream 100 bases:

>100_bases
AAGAGGACAAGAAGCTATGAAGAAGATGGTCATCCTGCTCATAACCGGCGATATTGTCTGTACGGTCCTGGCATTGGGAA
TCGCCTACCTGGTCAGGTTC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 883; Mature: 883

Protein sequence:

>883_residues
MFNRRIALICLIVATLSACGGKTKEELYAEAVKELDKGNANGAIVLLKNAVEKDQNYFDARYKLAKAYMTVGKFEQAEKE
FQKALRQNPSNPEIRLDLAKLYNSINKPDESIAEAKAYLSARAGSADALEVIGTSYGQKKMFDEAEKYLKESLQAEPARA
SAMLQLAKVYLATKREQEGMGLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKALEYYQKIMQADPDDANAAFRIGMMHIS
KGEVDKAERLADDLIRKASKRPEGHQLKGIALYTRKNYDQAITELQGVVKNYQNPGAYYYLGLSYYQRNDLESALSQFRK
VIDLNPKHLQARLMSATVLLQQKRTDDAITEAKRVIELDDKNAFAHNVLGSAYIAKGMTDEAVRELNRAIELEPKLVGAH
MKKGIVNLARGKRAEGEEELETAVKVAPDVLNSRYLLASYYMRLNKQARAIEVLRAGLRGGKQDAPLYNTMAAAAFADKR
EKDGILYLQKAREVDQAYLPASFNLASYYISKKDNGRAAGLFNEILKRDPANLKALIGLGAISESEGKAQEAVAYYTKAK
ATKDPVGYLSLASYYIRKKEAPKALALANEGLKGAPNNAALLELKGGLLAADKKYAEALKVYDELEKVAPTRAIPLKIGA
LVVTKNIPKAVEQAQKVVAANPKSAAGHLVIASIYESQKDYDRAISAVRSGIAVEPGNLRASMALGGIYEKKRDFARAIA
AYDDILRKNPKNIPALFAKGAAFDQSGKKKEAAGIYRAVLKIAPDFVPALNNLAYLAAEGYGNKSEALSLASRANKLQPN
NAGVMDTYGYALLINGKRTASVRVLEKAVSLLPNNPAVHYHLAMAYRDMGDRAKASVSVQKSLQYGEFPESAAARKLLAE
LKR

Sequences:

>Translated_883_residues
MFNRRIALICLIVATLSACGGKTKEELYAEAVKELDKGNANGAIVLLKNAVEKDQNYFDARYKLAKAYMTVGKFEQAEKE
FQKALRQNPSNPEIRLDLAKLYNSINKPDESIAEAKAYLSARAGSADALEVIGTSYGQKKMFDEAEKYLKESLQAEPARA
SAMLQLAKVYLATKREQEGMGLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKALEYYQKIMQADPDDANAAFRIGMMHIS
KGEVDKAERLADDLIRKASKRPEGHQLKGIALYTRKNYDQAITELQGVVKNYQNPGAYYYLGLSYYQRNDLESALSQFRK
VIDLNPKHLQARLMSATVLLQQKRTDDAITEAKRVIELDDKNAFAHNVLGSAYIAKGMTDEAVRELNRAIELEPKLVGAH
MKKGIVNLARGKRAEGEEELETAVKVAPDVLNSRYLLASYYMRLNKQARAIEVLRAGLRGGKQDAPLYNTMAAAAFADKR
EKDGILYLQKAREVDQAYLPASFNLASYYISKKDNGRAAGLFNEILKRDPANLKALIGLGAISESEGKAQEAVAYYTKAK
ATKDPVGYLSLASYYIRKKEAPKALALANEGLKGAPNNAALLELKGGLLAADKKYAEALKVYDELEKVAPTRAIPLKIGA
LVVTKNIPKAVEQAQKVVAANPKSAAGHLVIASIYESQKDYDRAISAVRSGIAVEPGNLRASMALGGIYEKKRDFARAIA
AYDDILRKNPKNIPALFAKGAAFDQSGKKKEAAGIYRAVLKIAPDFVPALNNLAYLAAEGYGNKSEALSLASRANKLQPN
NAGVMDTYGYALLINGKRTASVRVLEKAVSLLPNNPAVHYHLAMAYRDMGDRAKASVSVQKSLQYGEFPESAAARKLLAE
LKR
>Mature_883_residues
MFNRRIALICLIVATLSACGGKTKEELYAEAVKELDKGNANGAIVLLKNAVEKDQNYFDARYKLAKAYMTVGKFEQAEKE
FQKALRQNPSNPEIRLDLAKLYNSINKPDESIAEAKAYLSARAGSADALEVIGTSYGQKKMFDEAEKYLKESLQAEPARA
SAMLQLAKVYLATKREQEGMGLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKALEYYQKIMQADPDDANAAFRIGMMHIS
KGEVDKAERLADDLIRKASKRPEGHQLKGIALYTRKNYDQAITELQGVVKNYQNPGAYYYLGLSYYQRNDLESALSQFRK
VIDLNPKHLQARLMSATVLLQQKRTDDAITEAKRVIELDDKNAFAHNVLGSAYIAKGMTDEAVRELNRAIELEPKLVGAH
MKKGIVNLARGKRAEGEEELETAVKVAPDVLNSRYLLASYYMRLNKQARAIEVLRAGLRGGKQDAPLYNTMAAAAFADKR
EKDGILYLQKAREVDQAYLPASFNLASYYISKKDNGRAAGLFNEILKRDPANLKALIGLGAISESEGKAQEAVAYYTKAK
ATKDPVGYLSLASYYIRKKEAPKALALANEGLKGAPNNAALLELKGGLLAADKKYAEALKVYDELEKVAPTRAIPLKIGA
LVVTKNIPKAVEQAQKVVAANPKSAAGHLVIASIYESQKDYDRAISAVRSGIAVEPGNLRASMALGGIYEKKRDFARAIA
AYDDILRKNPKNIPALFAKGAAFDQSGKKKEAAGIYRAVLKIAPDFVPALNNLAYLAAEGYGNKSEALSLASRANKLQPN
NAGVMDTYGYALLINGKRTASVRVLEKAVSLLPNNPAVHYHLAMAYRDMGDRAKASVSVQKSLQYGEFPESAAARKLLAE
LKR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=448, Percent_Identity=22.3214285714286, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI32307148, Length=446, Percent_Identity=21.9730941704036, Blast_Score=94, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI115532690, Length=452, Percent_Identity=22.5663716814159, Blast_Score=85, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115532692, Length=383, Percent_Identity=22.1932114882507, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI17647755, Length=443, Percent_Identity=20.5417607223476, Blast_Score=79, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585827, Length=443, Percent_Identity=20.5417607223476, Blast_Score=79, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585829, Length=443, Percent_Identity=20.5417607223476, Blast_Score=79, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 97100; Mature: 97100

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRRIALICLIVATLSACGGKTKEELYAEAVKELDKGNANGAIVLLKNAVEKDQNYFDA
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH
RYKLAKAYMTVGKFEQAEKEFQKALRQNPSNPEIRLDLAKLYNSINKPDESIAEAKAYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHH
ARAGSADALEVIGTSYGQKKMFDEAEKYLKESLQAEPARASAMLQLAKVYLATKREQEGM
HCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCH
GLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKALEYYQKIMQADPDDANAAFRIGMMHIS
HHHHHHHHCCCCCCHHEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC
KGEVDKAERLADDLIRKASKRPEGHQLKGIALYTRKNYDQAITELQGVVKNYQNPGAYYY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEE
LGLSYYQRNDLESALSQFRKVIDLNPKHLQARLMSATVLLQQKRTDDAITEAKRVIELDD
EEEHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECC
KNAFAHNVLGSAYIAKGMTDEAVRELNRAIELEPKLVGAHMKKGIVNLARGKRAEGEEEL
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
ETAVKVAPDVLNSRYLLASYYMRLNKQARAIEVLRAGLRGGKQDAPLYNTMAAAAFADKR
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
EKDGILYLQKAREVDQAYLPASFNLASYYISKKDNGRAAGLFNEILKRDPANLKALIGLG
CCCCEEEEHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCCCHHHHHEEC
AISESEGKAQEAVAYYTKAKATKDPVGYLSLASYYIRKKEAPKALALANEGLKGAPNNAA
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCE
LLELKGGLLAADKKYAEALKVYDELEKVAPTRAIPLKIGALVVTKNIPKAVEQAQKVVAA
EEEECCCEEECHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCHHHHHHHHHHHHC
NPKSAAGHLVIASIYESQKDYDRAISAVRSGIAVEPGNLRASMALGGIYEKKRDFARAIA
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
AYDDILRKNPKNIPALFAKGAAFDQSGKKKEAAGIYRAVLKIAPDFVPALNNLAYLAAEG
HHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECC
YGNKSEALSLASRANKLQPNNAGVMDTYGYALLINGKRTASVRVLEKAVSLLPNNPAVHY
CCCHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
HLAMAYRDMGDRAKASVSVQKSLQYGEFPESAAARKLLAELKR
EHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFNRRIALICLIVATLSACGGKTKEELYAEAVKELDKGNANGAIVLLKNAVEKDQNYFDA
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH
RYKLAKAYMTVGKFEQAEKEFQKALRQNPSNPEIRLDLAKLYNSINKPDESIAEAKAYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHH
ARAGSADALEVIGTSYGQKKMFDEAEKYLKESLQAEPARASAMLQLAKVYLATKREQEGM
HCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCH
GLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKALEYYQKIMQADPDDANAAFRIGMMHIS
HHHHHHHHCCCCCCHHEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC
KGEVDKAERLADDLIRKASKRPEGHQLKGIALYTRKNYDQAITELQGVVKNYQNPGAYYY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEE
LGLSYYQRNDLESALSQFRKVIDLNPKHLQARLMSATVLLQQKRTDDAITEAKRVIELDD
EEEHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECC
KNAFAHNVLGSAYIAKGMTDEAVRELNRAIELEPKLVGAHMKKGIVNLARGKRAEGEEEL
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
ETAVKVAPDVLNSRYLLASYYMRLNKQARAIEVLRAGLRGGKQDAPLYNTMAAAAFADKR
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
EKDGILYLQKAREVDQAYLPASFNLASYYISKKDNGRAAGLFNEILKRDPANLKALIGLG
CCCCEEEEHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCCCHHHHHEEC
AISESEGKAQEAVAYYTKAKATKDPVGYLSLASYYIRKKEAPKALALANEGLKGAPNNAA
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCE
LLELKGGLLAADKKYAEALKVYDELEKVAPTRAIPLKIGALVVTKNIPKAVEQAQKVVAA
EEEECCCEEECHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCHHHHHHHHHHHHC
NPKSAAGHLVIASIYESQKDYDRAISAVRSGIAVEPGNLRASMALGGIYEKKRDFARAIA
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
AYDDILRKNPKNIPALFAKGAAFDQSGKKKEAAGIYRAVLKIAPDFVPALNNLAYLAAEG
HHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECC
YGNKSEALSLASRANKLQPNNAGVMDTYGYALLINGKRTASVRVLEKAVSLLPNNPAVHY
CCCHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
HLAMAYRDMGDRAKASVSVQKSLQYGEFPESAAARKLLAELKR
EHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]