| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223228
Identifier: 78223228
GI number: 78223228
Start: 2261694
End: 2261930
Strand: Reverse
Name: 78223228
Synonym: Gmet_2021
Alternate gene names: NA
Gene position: 2261930-2261694 (Counterclockwise)
Preceding gene: 78223229
Following gene: 78223227
Centisome position: 56.58
GC content: 53.59
Gene sequence:
>237_bases ATGACCATCGAAACCCAACTCATCACCTATTTCAAAGACACCCTCGATGCCGACGTGACTCCGGGCACCCCCCTCATCGA ACAGGGGATCATCGACTCCATGGGGGTCATGGAGCTCATCACCTTCATTCAGCAGACCTTTGACGTCGAATTCGACGTTG ATGACATGACCGTCGAAAAGCTTGGCACCGTAACGGCCATTTCGAGCCTGATCACATCCAAGAGGGGGGAAGCATGA
Upstream 100 bases:
>100_bases CGGTGGCCAGAGTTTCCCTCACCCGCCCTTCGGGCACCCTCTCCCTGGGGGAGAGGGTTGATAGACAAAAGTAGTCATTC CAAAACCAGAGGTACTGAGC
Downstream 100 bases:
>100_bases GTCTGAGACCGTATCTGCTAGGCCATCTGCTGGAAGACACCGCCGCGCGGTTGCCCGATAAGGTTGCTGTCAAGCACCAC GACCGGACCATCACCTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTIETQLITYFKDTLDADVTPGTPLIEQGIIDSMGVMELITFIQQTFDVEFDVDDMTVEKLGTVTAISSLITSKRGEA
Sequences:
>Translated_78_residues MTIETQLITYFKDTLDADVTPGTPLIEQGIIDSMGVMELITFIQQTFDVEFDVDDMTVEKLGTVTAISSLITSKRGEA >Mature_77_residues TIETQLITYFKDTLDADVTPGTPLIEQGIIDSMGVMELITFIQQTFDVEFDVDDMTVEKLGTVTAISSLITSKRGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8590; Mature: 8459
Theoretical pI: Translated: 3.65; Mature: 3.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIETQLITYFKDTLDADVTPGTPLIEQGIIDSMGVMELITFIQQTFDVEFDVDDMTVEK CCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH LGTVTAISSLITSKRGEA HHHHHHHHHHHHHCCCCC >Mature Secondary Structure TIETQLITYFKDTLDADVTPGTPLIEQGIIDSMGVMELITFIQQTFDVEFDVDDMTVEK CCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH LGTVTAISSLITSKRGEA HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA