| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223204
Identifier: 78223204
GI number: 78223204
Start: 2232398
End: 2233102
Strand: Reverse
Name: 78223204
Synonym: Gmet_1997
Alternate gene names: NA
Gene position: 2233102-2232398 (Counterclockwise)
Preceding gene: 78223205
Following gene: 78223203
Centisome position: 55.86
GC content: 58.16
Gene sequence:
>705_bases ATGGCGAAGTTGGCCGCGAAGTTAACAATGAGGATGCTTCTGGCAGGCCTTGCCTTGGCCGATGTGTCATGGGGCGCCGA CATTCCGCCTGCCATCGAATTCCTCTCGCCCAGGGAGGGGACGACAGTTCACGGGGAAATCTCCATCGAAGCGCGGGTCA GTAACCCTTCCGTTGTGGATTTCGTTGAGTTTTACCTCCAGGAGCCTGGTGCGAAGGATCGTTACGCCTGGAGGGAGTAT GGACTTCCGCCCTACGTGTGGGGAGGCAAGGGGTACAAGCTCGATACGCGGCTCTTTGCCGACGGCCCCGCCTCGGTAGT TCTGTATTGCTATACGGGGGGGGCGAAGCCTGCTTCAGAGAAGCGGGTGCACTTCACCATCGACAACAGCAAGCCAGTCG TTCGTATCGTCTCTCCAACCGACCGTTCATCCGTTGATGGGGCATTTCCGGTCAAGGTGGAACTCATCGCCTCGAAGGGG AAAGGGAACCCGGGTGGCGTAGTGGCGGTTTCAGTTTTGGTGGACGGAACCTTGGTGCAGAAGATGACGAAGCCCCCCTT CGAGACGAGTGTGGATACCTGCTTGATGGCCCCAGGGCTCCACTTAATACGTGTCGTTGCCGAAAATGGTGAAGGTTTGA CCGGCTCTGACAGTGTGTTGATAAACCGCAAGGCCGGAACGGGGCTGTTGCGGGGGACCAAGTGA
Upstream 100 bases:
>100_bases CTCCCGCCAATCTGACTCGGGCACCCGGAAAACGGGCACCGGCGGCCATGGCCGTGCCGGTTGACCTTGACGCGTATCGC AGTTGCAAGGGGATATAATT
Downstream 100 bases:
>100_bases AGAGAAATGTGGGCACTGGTTTCTGTGCAGTCGGTACACTCTGCGCGATTCTGGTGCTCCTCTTTTCCGGTGTCTCGGGT TGTTCCCGAACGGGAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MAKLAAKLTMRMLLAGLALADVSWGADIPPAIEFLSPREGTTVHGEISIEARVSNPSVVDFVEFYLQEPGAKDRYAWREY GLPPYVWGGKGYKLDTRLFADGPASVVLYCYTGGAKPASEKRVHFTIDNSKPVVRIVSPTDRSSVDGAFPVKVELIASKG KGNPGGVVAVSVLVDGTLVQKMTKPPFETSVDTCLMAPGLHLIRVVAENGEGLTGSDSVLINRKAGTGLLRGTK
Sequences:
>Translated_234_residues MAKLAAKLTMRMLLAGLALADVSWGADIPPAIEFLSPREGTTVHGEISIEARVSNPSVVDFVEFYLQEPGAKDRYAWREY GLPPYVWGGKGYKLDTRLFADGPASVVLYCYTGGAKPASEKRVHFTIDNSKPVVRIVSPTDRSSVDGAFPVKVELIASKG KGNPGGVVAVSVLVDGTLVQKMTKPPFETSVDTCLMAPGLHLIRVVAENGEGLTGSDSVLINRKAGTGLLRGTK >Mature_233_residues AKLAAKLTMRMLLAGLALADVSWGADIPPAIEFLSPREGTTVHGEISIEARVSNPSVVDFVEFYLQEPGAKDRYAWREYG LPPYVWGGKGYKLDTRLFADGPASVVLYCYTGGAKPASEKRVHFTIDNSKPVVRIVSPTDRSSVDGAFPVKVELIASKGK GNPGGVVAVSVLVDGTLVQKMTKPPFETSVDTCLMAPGLHLIRVVAENGEGLTGSDSVLINRKAGTGLLRGTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24944; Mature: 24813
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLAAKLTMRMLLAGLALADVSWGADIPPAIEFLSPREGTTVHGEISIEARVSNPSVVD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCHHH FVEFYLQEPGAKDRYAWREYGLPPYVWGGKGYKLDTRLFADGPASVVLYCYTGGAKPASE HHHHHHHCCCCCCCCHHHHCCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC KRVHFTIDNSKPVVRIVSPTDRSSVDGAFPVKVELIASKGKGNPGGVVAVSVLVDGTLVQ CEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCHHHH KMTKPPFETSVDTCLMAPGLHLIRVVAENGEGLTGSDSVLINRKAGTGLLRGTK HHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure AKLAAKLTMRMLLAGLALADVSWGADIPPAIEFLSPREGTTVHGEISIEARVSNPSVVD CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCHHH FVEFYLQEPGAKDRYAWREYGLPPYVWGGKGYKLDTRLFADGPASVVLYCYTGGAKPASE HHHHHHHCCCCCCCCHHHHCCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC KRVHFTIDNSKPVVRIVSPTDRSSVDGAFPVKVELIASKGKGNPGGVVAVSVLVDGTLVQ CEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCHHHH KMTKPPFETSVDTCLMAPGLHLIRVVAENGEGLTGSDSVLINRKAGTGLLRGTK HHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA