| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223203
Identifier: 78223203
GI number: 78223203
Start: 2230287
End: 2232401
Strand: Reverse
Name: 78223203
Synonym: Gmet_1996
Alternate gene names: NA
Gene position: 2232401-2230287 (Counterclockwise)
Preceding gene: 78223204
Following gene: 78223201
Centisome position: 55.85
GC content: 59.57
Gene sequence:
>2115_bases GTGAAGAGAAATGTGGGCACTGGTTTCTGTGCAGTCGGTACACTCTGCGCGATTCTGGTGCTCCTCTTTTCCGGTGTCTC GGGTTGTTCCCGAACGGGAGTGCATATTGTCTCCTACCAGCTCCGTGACCGTGTAATTACCCTCCGGCAGCCACAGATGC GCTCGTCCCTGATTGTCGGATTCAAGGTCGATGCGGGAGGCATTCTCTATGACCGGCTGACAGTGCAGGGGGAATTGCGC CGTGACGGGGTGCCACTCGGACGGGACACTATCTGCCGGCTTGATGGCCCCACGGGAAGTTTCGGCTTCGACATCCCCCA CCAGGCAGACCTCCTTGATCCTGAACGTCCCTATTCCATTCCAGATGGCATTTATTCAGTTCAGATACGCGTGATGGACC CTGGCGGCCATGTCGTGGCCGACCTCCTCCACGAGTTCCGACGCAACCAGCTTGGACGGAGGTTTGTGGCAAAGGGGTAT GAGTACAAACCGTTCCGATGTGTTGCGGATCAACCACTGGCTGGTAGCCATTCGATCCGTTCGGTCTCGGCTCGGGTCGA TACCGACGACGGGATTCTCTTTGCCCATAGCCCCCAGGAGCGGGTCTTCAGTGACAGTGTGCCTGGCAAGGGTTCGGTGG ATAATGGGGTGAGCATCTGCTTGGCACGGGGTGAGACCCAGGCTGTTGCGGTTTCTCTGCGGGGGAAACGGGATCTCGGT GTCGTGTCTCTTGAAGTGACGCCCCTGCGAAGCGTCAGTGGCTCGATACTGTCTGGGGCGGTTCTCTGTGGCGTGGTCAA AGACTTGAACGAAGTGGTTCGGGAGGACGCGGAGCAGACTGCGCTCCAGGTGCGTCGGGCACCACGGCTGATCGAACAGG GCGCGGTGACGGTCGGTCATGATGAGACGCGGAGTTTCTGGATCACTGTTGCCATTCCTGTAGGTGCGGTTTCCGGCATT TACCGTGGGGCCTTGATGGTTCGCAACCATGCAGGGACGGTTGCCGAACTGCCACTGACGGTTGAAGTCCTGCCGTTGAC GCTGCCGGATCCGGACATCCGCTATGGCATGATGATGGATTACGCCTTCTACGAGTTGGATAATCCCGGATGGAGCGCTG AGGAGAGGCGAACCCTCGTCAAGCGGGGAGAGGAGATCTATCGGGATTTCCGCGCCCACGGCATGAACGTTGCCTATCCC CATTCCCACTTCTTCTATCGCACTGACGACAAGGGGCAACCCGTGCTCGAAGGGCTGAAGGCGGCCCTTGGGTCATATCG CAGTCAGGGATTTTCCGGTCCCTTTGTCTGGTATCTCGGGCATCTGCTCCATACAGCCAAGCCGCAACATCCCGGGAGCA TTCTGTTGTATGACGAAGAGGTGGCCGTCCGGCGTCTACGGGCTCTTCTCTCCGAGTTGGAACGGCTGTGCCGCGAAAGG GGAATTGCGAAGGAACGGGTGTTGATCCAGGTGGTGGATGAGCCGGACCGTCGGGACCAGGTGCGCACTAACGTCGGCGA AACGCTCCATCGAATCGTGCGCGAGATGGGTTTCAGAACCCTGATTACCCGCCCTTGGCCGCAAGTGGATGTAATCTGTA CCGGCGACCCGGATGACGATGCTGAGGCCGACAGACTCAGGAAAACAGCGCATGAGTGGTGGATCTATCCTAACGGGGCA CTGACAGGGCAGAATCTGAGCTATACCCGTTATGTTTTCGGCTTCGGCGCGTGGCGCTGGGGGGTAAACGGCGTTGTTCC CTGGACCTACCAGATGAGCCAGGGGAGCAATGGCAACCCCTTCACCGTGCTGGACGGTCCCGAGGTCATGGTGGCCTATC CGGGCGCTGCCGGTCCGATCTCTACACCAGTCTGGGAGACGATCCGGGACGGCATTAACGACTACCGTTATATCCTGGCA CTTCGTGAACTGATTAACAGGGCTAAGTCGCGGGGCGACGGGCGGGGTGTCCACGTCGAGCGGGAACTGGAGCGCATCAG GGCAAGCCTTGGCGCCGGACCCTCTGCAGCGGAAGGGAGTTACGGCGCATGGCCGCCTGGAAGCTTTGATGAGGTTCGCG GCAGGATTATTGCCCTGATCCGGGAGCTGCGCTGA
Upstream 100 bases:
>100_bases ACTTAATACGTGTCGTTGCCGAAAATGGTGAAGGTTTGACCGGCTCTGACAGTGTGTTGATAAACCGCAAGGCCGGAACG GGGCTGTTGCGGGGGACCAA
Downstream 100 bases:
>100_bases CGACCTCGCGCAGGACGGACCGATTTCCGTAAGGATCGGTCAGTTCTGCGGTGAAGTGATAGGAGCTGCCGGGTTTCAAG CCGGTGACGGCAATAGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVGFKVDAGGILYDRLTVQGELR RDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSIPDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGY EYKPFRCVADQPLAGSHSIRSVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGHDETRSFWITVAIPVGAVSGI YRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMDYAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYP HSHFFYRTDDKGQPVLEGLKAALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDDAEADRLRKTAHEWWIYPNGA LTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNPFTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILA LRELINRAKSRGDGRGVHVERELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR
Sequences:
>Translated_704_residues MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVGFKVDAGGILYDRLTVQGELR RDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSIPDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGY EYKPFRCVADQPLAGSHSIRSVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGHDETRSFWITVAIPVGAVSGI YRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMDYAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYP HSHFFYRTDDKGQPVLEGLKAALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDDAEADRLRKTAHEWWIYPNGA LTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNPFTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILA LRELINRAKSRGDGRGVHVERELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR >Mature_704_residues MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVGFKVDAGGILYDRLTVQGELR RDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSIPDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGY EYKPFRCVADQPLAGSHSIRSVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGHDETRSFWITVAIPVGAVSGI YRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMDYAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYP HSHFFYRTDDKGQPVLEGLKAALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDDAEADRLRKTAHEWWIYPNGA LTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNPFTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILA LRELINRAKSRGDGRGVHVERELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78051; Mature: 78051
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCEEEECCCCCCCCEEEE FKVDAGGILYDRLTVQGELRRDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSI EEECCCCEEEEEEEEECHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGYEYKPFRCVADQPLAGSHSIR CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCE SVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG EEEEEECCCCCEEEEECCHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGH EEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC DETRSFWITVAIPVGAVSGIYRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMD CCCCEEEEEEEECHHHHHHHHHCEEEEECCCCCEEECCEEEEEEEEECCCCCCCHHHEEE YAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYPHSHFFYRTDDKGQPVLEGLK EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCHHHHHHH AALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHC GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDD CCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCC AEADRLRKTAHEWWIYPNGALTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNP HHHHHHHHHHHHEEEECCCCCCCCCCCEEEHEEECCHHHCCCCCCCCEEEEECCCCCCCC FTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILALRELINRAKSRGDGRGVHVE EEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH RELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCEEEECCCCCCCCEEEE FKVDAGGILYDRLTVQGELRRDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSI EEECCCCEEEEEEEEECHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGYEYKPFRCVADQPLAGSHSIR CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCE SVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG EEEEEECCCCCEEEEECCHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGH EEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC DETRSFWITVAIPVGAVSGIYRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMD CCCCEEEEEEEECHHHHHHHHHCEEEEECCCCCEEECCEEEEEEEEECCCCCCCHHHEEE YAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYPHSHFFYRTDDKGQPVLEGLK EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCHHHHHHH AALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHC GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDD CCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCC AEADRLRKTAHEWWIYPNGALTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNP HHHHHHHHHHHHEEEECCCCCCCCCCCEEEHEEECCHHHCCCCCCCCEEEEECCCCCCCC FTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILALRELINRAKSRGDGRGVHVE EEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH RELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA