Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78223203

Identifier: 78223203

GI number: 78223203

Start: 2230287

End: 2232401

Strand: Reverse

Name: 78223203

Synonym: Gmet_1996

Alternate gene names: NA

Gene position: 2232401-2230287 (Counterclockwise)

Preceding gene: 78223204

Following gene: 78223201

Centisome position: 55.85

GC content: 59.57

Gene sequence:

>2115_bases
GTGAAGAGAAATGTGGGCACTGGTTTCTGTGCAGTCGGTACACTCTGCGCGATTCTGGTGCTCCTCTTTTCCGGTGTCTC
GGGTTGTTCCCGAACGGGAGTGCATATTGTCTCCTACCAGCTCCGTGACCGTGTAATTACCCTCCGGCAGCCACAGATGC
GCTCGTCCCTGATTGTCGGATTCAAGGTCGATGCGGGAGGCATTCTCTATGACCGGCTGACAGTGCAGGGGGAATTGCGC
CGTGACGGGGTGCCACTCGGACGGGACACTATCTGCCGGCTTGATGGCCCCACGGGAAGTTTCGGCTTCGACATCCCCCA
CCAGGCAGACCTCCTTGATCCTGAACGTCCCTATTCCATTCCAGATGGCATTTATTCAGTTCAGATACGCGTGATGGACC
CTGGCGGCCATGTCGTGGCCGACCTCCTCCACGAGTTCCGACGCAACCAGCTTGGACGGAGGTTTGTGGCAAAGGGGTAT
GAGTACAAACCGTTCCGATGTGTTGCGGATCAACCACTGGCTGGTAGCCATTCGATCCGTTCGGTCTCGGCTCGGGTCGA
TACCGACGACGGGATTCTCTTTGCCCATAGCCCCCAGGAGCGGGTCTTCAGTGACAGTGTGCCTGGCAAGGGTTCGGTGG
ATAATGGGGTGAGCATCTGCTTGGCACGGGGTGAGACCCAGGCTGTTGCGGTTTCTCTGCGGGGGAAACGGGATCTCGGT
GTCGTGTCTCTTGAAGTGACGCCCCTGCGAAGCGTCAGTGGCTCGATACTGTCTGGGGCGGTTCTCTGTGGCGTGGTCAA
AGACTTGAACGAAGTGGTTCGGGAGGACGCGGAGCAGACTGCGCTCCAGGTGCGTCGGGCACCACGGCTGATCGAACAGG
GCGCGGTGACGGTCGGTCATGATGAGACGCGGAGTTTCTGGATCACTGTTGCCATTCCTGTAGGTGCGGTTTCCGGCATT
TACCGTGGGGCCTTGATGGTTCGCAACCATGCAGGGACGGTTGCCGAACTGCCACTGACGGTTGAAGTCCTGCCGTTGAC
GCTGCCGGATCCGGACATCCGCTATGGCATGATGATGGATTACGCCTTCTACGAGTTGGATAATCCCGGATGGAGCGCTG
AGGAGAGGCGAACCCTCGTCAAGCGGGGAGAGGAGATCTATCGGGATTTCCGCGCCCACGGCATGAACGTTGCCTATCCC
CATTCCCACTTCTTCTATCGCACTGACGACAAGGGGCAACCCGTGCTCGAAGGGCTGAAGGCGGCCCTTGGGTCATATCG
CAGTCAGGGATTTTCCGGTCCCTTTGTCTGGTATCTCGGGCATCTGCTCCATACAGCCAAGCCGCAACATCCCGGGAGCA
TTCTGTTGTATGACGAAGAGGTGGCCGTCCGGCGTCTACGGGCTCTTCTCTCCGAGTTGGAACGGCTGTGCCGCGAAAGG
GGAATTGCGAAGGAACGGGTGTTGATCCAGGTGGTGGATGAGCCGGACCGTCGGGACCAGGTGCGCACTAACGTCGGCGA
AACGCTCCATCGAATCGTGCGCGAGATGGGTTTCAGAACCCTGATTACCCGCCCTTGGCCGCAAGTGGATGTAATCTGTA
CCGGCGACCCGGATGACGATGCTGAGGCCGACAGACTCAGGAAAACAGCGCATGAGTGGTGGATCTATCCTAACGGGGCA
CTGACAGGGCAGAATCTGAGCTATACCCGTTATGTTTTCGGCTTCGGCGCGTGGCGCTGGGGGGTAAACGGCGTTGTTCC
CTGGACCTACCAGATGAGCCAGGGGAGCAATGGCAACCCCTTCACCGTGCTGGACGGTCCCGAGGTCATGGTGGCCTATC
CGGGCGCTGCCGGTCCGATCTCTACACCAGTCTGGGAGACGATCCGGGACGGCATTAACGACTACCGTTATATCCTGGCA
CTTCGTGAACTGATTAACAGGGCTAAGTCGCGGGGCGACGGGCGGGGTGTCCACGTCGAGCGGGAACTGGAGCGCATCAG
GGCAAGCCTTGGCGCCGGACCCTCTGCAGCGGAAGGGAGTTACGGCGCATGGCCGCCTGGAAGCTTTGATGAGGTTCGCG
GCAGGATTATTGCCCTGATCCGGGAGCTGCGCTGA

Upstream 100 bases:

>100_bases
ACTTAATACGTGTCGTTGCCGAAAATGGTGAAGGTTTGACCGGCTCTGACAGTGTGTTGATAAACCGCAAGGCCGGAACG
GGGCTGTTGCGGGGGACCAA

Downstream 100 bases:

>100_bases
CGACCTCGCGCAGGACGGACCGATTTCCGTAAGGATCGGTCAGTTCTGCGGTGAAGTGATAGGAGCTGCCGGGTTTCAAG
CCGGTGACGGCAATAGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVGFKVDAGGILYDRLTVQGELR
RDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSIPDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGY
EYKPFRCVADQPLAGSHSIRSVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG
VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGHDETRSFWITVAIPVGAVSGI
YRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMDYAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYP
HSHFFYRTDDKGQPVLEGLKAALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER
GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDDAEADRLRKTAHEWWIYPNGA
LTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNPFTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILA
LRELINRAKSRGDGRGVHVERELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR

Sequences:

>Translated_704_residues
MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVGFKVDAGGILYDRLTVQGELR
RDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSIPDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGY
EYKPFRCVADQPLAGSHSIRSVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG
VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGHDETRSFWITVAIPVGAVSGI
YRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMDYAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYP
HSHFFYRTDDKGQPVLEGLKAALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER
GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDDAEADRLRKTAHEWWIYPNGA
LTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNPFTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILA
LRELINRAKSRGDGRGVHVERELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR
>Mature_704_residues
MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVGFKVDAGGILYDRLTVQGELR
RDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSIPDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGY
EYKPFRCVADQPLAGSHSIRSVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG
VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGHDETRSFWITVAIPVGAVSGI
YRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMDYAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYP
HSHFFYRTDDKGQPVLEGLKAALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER
GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDDAEADRLRKTAHEWWIYPNGA
LTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNPFTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILA
LRELINRAKSRGDGRGVHVERELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78051; Mature: 78051

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCEEEECCCCCCCCEEEE
FKVDAGGILYDRLTVQGELRRDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSI
EEECCCCEEEEEEEEECHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGYEYKPFRCVADQPLAGSHSIR
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCE
SVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG
EEEEEECCCCCEEEEECCHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC
VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGH
EEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
DETRSFWITVAIPVGAVSGIYRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMD
CCCCEEEEEEEECHHHHHHHHHCEEEEECCCCCEEECCEEEEEEEEECCCCCCCHHHEEE
YAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYPHSHFFYRTDDKGQPVLEGLK
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCHHHHHHH
AALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHC
GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDD
CCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCC
AEADRLRKTAHEWWIYPNGALTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNP
HHHHHHHHHHHHEEEECCCCCCCCCCCEEEHEEECCHHHCCCCCCCCEEEEECCCCCCCC
FTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILALRELINRAKSRGDGRGVHVE
EEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH
RELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRNVGTGFCAVGTLCAILVLLFSGVSGCSRTGVHIVSYQLRDRVITLRQPQMRSSLIVG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCEEEECCCCCCCCEEEE
FKVDAGGILYDRLTVQGELRRDGVPLGRDTICRLDGPTGSFGFDIPHQADLLDPERPYSI
EEECCCCEEEEEEEEECHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDGIYSVQIRVMDPGGHVVADLLHEFRRNQLGRRFVAKGYEYKPFRCVADQPLAGSHSIR
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCE
SVSARVDTDDGILFAHSPQERVFSDSVPGKGSVDNGVSICLARGETQAVAVSLRGKRDLG
EEEEEECCCCCEEEEECCHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC
VVSLEVTPLRSVSGSILSGAVLCGVVKDLNEVVREDAEQTALQVRRAPRLIEQGAVTVGH
EEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
DETRSFWITVAIPVGAVSGIYRGALMVRNHAGTVAELPLTVEVLPLTLPDPDIRYGMMMD
CCCCEEEEEEEECHHHHHHHHHCEEEEECCCCCEEECCEEEEEEEEECCCCCCCHHHEEE
YAFYELDNPGWSAEERRTLVKRGEEIYRDFRAHGMNVAYPHSHFFYRTDDKGQPVLEGLK
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCHHHHHHH
AALGSYRSQGFSGPFVWYLGHLLHTAKPQHPGSILLYDEEVAVRRLRALLSELERLCRER
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHC
GIAKERVLIQVVDEPDRRDQVRTNVGETLHRIVREMGFRTLITRPWPQVDVICTGDPDDD
CCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCC
AEADRLRKTAHEWWIYPNGALTGQNLSYTRYVFGFGAWRWGVNGVVPWTYQMSQGSNGNP
HHHHHHHHHHHHEEEECCCCCCCCCCCEEEHEEECCHHHCCCCCCCCEEEEECCCCCCCC
FTVLDGPEVMVAYPGAAGPISTPVWETIRDGINDYRYILALRELINRAKSRGDGRGVHVE
EEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH
RELERIRASLGAGPSAAEGSYGAWPPGSFDEVRGRIIALIRELR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA