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The map label for this gene is trpH [H]

Identifier: 78223182

GI number: 78223182

Start: 2204697

End: 2205578

Strand: Direct

Name: trpH [H]

Synonym: Gmet_1975

Alternate gene names: 78223182

Gene position: 2204697-2205578 (Clockwise)

Preceding gene: 78223178

Following gene: 78223183

Centisome position: 55.15

GC content: 56.69

Gene sequence:

>882_bases
ATGATGTCAACAATCGATCTCCATGTTCACTCAAACTATTCCGATGGCATCCACCCCCCGGCAGACTTGGTCAAGATGGC
CGCAGAGCGAGGCCTGGTCGCCATCGCCATTGCTGACCACGACACGGTGGATGGCATCGACGAAGCGCTGATCGCCGGCG
CACGCCTAGGCGTGGAGGTAGTTCCCGCGGTTGAACTTTCGGCCGAACACGGCCGTTATCGCGATATGCACATCCTGGGG
TATCACCTTGATCACCGCGATCCCCGTCTCGTGGACATGCTTGCAGAATTCAGGATAAACCGTGAGATTAGGGGACGGGC
CATCGTCGACAAGATAAACCAACGGCTTGCTGATGGGCGGAAACCGCTCCTCTCCTACGATGAAGTGCTCAATTTGGCAG
AGGGCGCAGTCGGTAGGCCCCACATCGGCAGGATGCTCATTGAACGCGGCTACGCCAGGAATATGGAGGACGCATTCCGC
AGGTATCTCATCCCATGTAATGTCCCAAAGCGCTATATTCCCGCCGGGGACGCCATCACGGAAATCAGGAGGGCCGGAGG
CGTGGCGGTTCTGGCTCACCCGATAACCGTCAGCGACGACAGGCAGGTGCTCCGCGGAATCGTATCGGAGCTTGTCGCAC
TAGGTCTTGATGGCATTGAAGTGTTCAACAACATGTGCTACAAGGACGACATGCTTTTCCTGGAATTTTTGTGCAGGGAA
TCCGGCCTTCTCATGACCGGCGGCTCAGACTTTCACGGATTTGAGGATGATGTGGAAATCGGTAGTGGTCGAGGGGGACT
CGCGGTTTCACATCGGCTTGCGGAAGCAGTAAAAAATCTGGCGGAATCACGGAGGATCACTCCACCGGGAAGCCGTACCT
GA

Upstream 100 bases:

>100_bases
ACCGCTATCTCTCTGTTGAAGCCGAAATAGTATGCTTCAGCTTGCAATCGACAGAGGAGCATGGTTTATTCTCTGATAAC
CTCATCACAGAGAAGAACTA

Downstream 100 bases:

>100_bases
AAGAATCCGATATGGCCGACGCGCGGGAAACCCTGGAAATGATGCGAGAGGTGGCACGGACAAGAATTTCCATGCTGCGT
GACGGTATAACCTTCTACGA

Product: PHP-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MMSTIDLHVHSNYSDGIHPPADLVKMAAERGLVAIAIADHDTVDGIDEALIAGARLGVEVVPAVELSAEHGRYRDMHILG
YHLDHRDPRLVDMLAEFRINREIRGRAIVDKINQRLADGRKPLLSYDEVLNLAEGAVGRPHIGRMLIERGYARNMEDAFR
RYLIPCNVPKRYIPAGDAITEIRRAGGVAVLAHPITVSDDRQVLRGIVSELVALGLDGIEVFNNMCYKDDMLFLEFLCRE
SGLLMTGGSDFHGFEDDVEIGSGRGGLAVSHRLAEAVKNLAESRRITPPGSRT

Sequences:

>Translated_293_residues
MMSTIDLHVHSNYSDGIHPPADLVKMAAERGLVAIAIADHDTVDGIDEALIAGARLGVEVVPAVELSAEHGRYRDMHILG
YHLDHRDPRLVDMLAEFRINREIRGRAIVDKINQRLADGRKPLLSYDEVLNLAEGAVGRPHIGRMLIERGYARNMEDAFR
RYLIPCNVPKRYIPAGDAITEIRRAGGVAVLAHPITVSDDRQVLRGIVSELVALGLDGIEVFNNMCYKDDMLFLEFLCRE
SGLLMTGGSDFHGFEDDVEIGSGRGGLAVSHRLAEAVKNLAESRRITPPGSRT
>Mature_293_residues
MMSTIDLHVHSNYSDGIHPPADLVKMAAERGLVAIAIADHDTVDGIDEALIAGARLGVEVVPAVELSAEHGRYRDMHILG
YHLDHRDPRLVDMLAEFRINREIRGRAIVDKINQRLADGRKPLLSYDEVLNLAEGAVGRPHIGRMLIERGYARNMEDAFR
RYLIPCNVPKRYIPAGDAITEIRRAGGVAVLAHPITVSDDRQVLRGIVSELVALGLDGIEVFNNMCYKDDMLFLEFLCRE
SGLLMTGGSDFHGFEDDVEIGSGRGGLAVSHRLAEAVKNLAESRRITPPGSRT

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=262, Percent_Identity=31.6793893129771, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 32305; Mature: 32305

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSTIDLHVHSNYSDGIHPPADLVKMAAERGLVAIAIADHDTVDGIDEALIAGARLGVEV
CCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCEEE
VPAVELSAEHGRYRDMHILGYHLDHRDPRLVDMLAEFRINREIRGRAIVDKINQRLADGR
ECCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCC
KPLLSYDEVLNLAEGAVGRPHIGRMLIERGYARNMEDAFRRYLIPCNVPKRYIPAGDAIT
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHH
EIRRAGGVAVLAHPITVSDDRQVLRGIVSELVALGLDGIEVFNNMCYKDDMLFLEFLCRE
HHHHHCCEEEEEECCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCC
SGLLMTGGSDFHGFEDDVEIGSGRGGLAVSHRLAEAVKNLAESRRITPPGSRT
CCEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMSTIDLHVHSNYSDGIHPPADLVKMAAERGLVAIAIADHDTVDGIDEALIAGARLGVEV
CCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCEEE
VPAVELSAEHGRYRDMHILGYHLDHRDPRLVDMLAEFRINREIRGRAIVDKINQRLADGR
ECCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCC
KPLLSYDEVLNLAEGAVGRPHIGRMLIERGYARNMEDAFRRYLIPCNVPKRYIPAGDAIT
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHH
EIRRAGGVAVLAHPITVSDDRQVLRGIVSELVALGLDGIEVFNNMCYKDDMLFLEFLCRE
HHHHHCCEEEEEECCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCC
SGLLMTGGSDFHGFEDDVEIGSGRGGLAVSHRLAEAVKNLAESRRITPPGSRT
CCEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]