| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223175
Identifier: 78223175
GI number: 78223175
Start: 2197125
End: 2198117
Strand: Direct
Name: 78223175
Synonym: Gmet_1968
Alternate gene names: NA
Gene position: 2197125-2198117 (Clockwise)
Preceding gene: 78223174
Following gene: 78223176
Centisome position: 54.96
GC content: 55.89
Gene sequence:
>993_bases ATGATTCGGATCATACTGTTGCTAGCGGGGTTTCTTTGCGAGTATACAGCCCTTCAGGCGCTTTTCAGCCAGCAGCAGGT ATGGATCCGCCTGATTCTGTTTATTGTTTCTCACCTGATCGCCGCAGTATCCCTTGCGCTCCTGCTCCGGTTGTCCCTTC CTCGTCAAGCTGACACGAAAAAATGGGGCAGTCTGGCATTATTCTTCAGCTTCGCCTTTTTCATCCCTGTTCTCGGATGC ATAGGGATGCTGGGTGCACTTGTCTATTTCCGCTTCTTACTCCGCTTCGATGCCCGGCCCGAATTTTTCAGCGTTCCGAT GACCCCGTTCATGCAGGAATCAGGGGGACCGGCTCCAGGGATGGGGGAAGGAGGCGCGTGGTCGCGACTGCGGTCAGAAT CCCTGCCCCGCCCCATGCGCCTGAAGGCCCTGCTGGCCGCCGGTTCCAGCAACAGTCGTGATGCCAGCCGATTGCTGCAC TTTGCCACCAGCGATAATGATGATGAAATTCGCCTGCTGGCCTTCAACCTGGCAGACCAGCGCGAGAAGGTCATCAGCAA GACCATATCTCAGTCGCTGGCCGAGTTGAAAAATGCCTCAGACCGTGACGAACGGCTCCTGCATTGCCGCAAGCTGGCCT TTTCGTACTGGGAGCTCATCTTCAACGATCTTGCCCAGAAAGACTTGGCAGAATTCTATGTTCTGCAGTCAATCACTTAT GCCACCCAAGCCCTGGATATGGACGCCACTGACCCCAACCTGTTGCTACTGCTGGGACGCTTGCACCTGTGGAGGGAGGA TCTGGAGTCCGCCGAAAAGGCGATTAACGACGCCATGAACAATGGCGCGCACCGTGACCGAGTGGTTCCGTATCTGGCTG AACTGGCTTTCCTCCGCAGGGATTTCGTCACCATGAATAGCTGCTTCGAACTGAATCCTCTGCTTCGCCACAAGCCCGGG ATAGGGCCGGTGGCGCAATTCTGGATGGGTTAA
Upstream 100 bases:
>100_bases TTGGCAGAAGTACCGGGCAAGAAGGCATCACCATGCACTCCACGAGTGTGACAACCGATGATCCCCTTGTTCAACTGGTT GCCCTGCTGGAGGAGAAGCA
Downstream 100 bases:
>100_bases CCACTATGGATCGTTTCCCGAAATCAGATAACGTGGATATCATGCTGCTTCTGGAGGGGACCTTCCCCTACGTCAGCGGC GGGGTATCCAGCTGGGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MIRIILLLAGFLCEYTALQALFSQQQVWIRLILFIVSHLIAAVSLALLLRLSLPRQADTKKWGSLALFFSFAFFIPVLGC IGMLGALVYFRFLLRFDARPEFFSVPMTPFMQESGGPAPGMGEGGAWSRLRSESLPRPMRLKALLAAGSSNSRDASRLLH FATSDNDDEIRLLAFNLADQREKVISKTISQSLAELKNASDRDERLLHCRKLAFSYWELIFNDLAQKDLAEFYVLQSITY ATQALDMDATDPNLLLLLGRLHLWREDLESAEKAINDAMNNGAHRDRVVPYLAELAFLRRDFVTMNSCFELNPLLRHKPG IGPVAQFWMG
Sequences:
>Translated_330_residues MIRIILLLAGFLCEYTALQALFSQQQVWIRLILFIVSHLIAAVSLALLLRLSLPRQADTKKWGSLALFFSFAFFIPVLGC IGMLGALVYFRFLLRFDARPEFFSVPMTPFMQESGGPAPGMGEGGAWSRLRSESLPRPMRLKALLAAGSSNSRDASRLLH FATSDNDDEIRLLAFNLADQREKVISKTISQSLAELKNASDRDERLLHCRKLAFSYWELIFNDLAQKDLAEFYVLQSITY ATQALDMDATDPNLLLLLGRLHLWREDLESAEKAINDAMNNGAHRDRVVPYLAELAFLRRDFVTMNSCFELNPLLRHKPG IGPVAQFWMG >Mature_330_residues MIRIILLLAGFLCEYTALQALFSQQQVWIRLILFIVSHLIAAVSLALLLRLSLPRQADTKKWGSLALFFSFAFFIPVLGC IGMLGALVYFRFLLRFDARPEFFSVPMTPFMQESGGPAPGMGEGGAWSRLRSESLPRPMRLKALLAAGSSNSRDASRLLH FATSDNDDEIRLLAFNLADQREKVISKTISQSLAELKNASDRDERLLHCRKLAFSYWELIFNDLAQKDLAEFYVLQSITY ATQALDMDATDPNLLLLLGRLHLWREDLESAEKAINDAMNNGAHRDRVVPYLAELAFLRRDFVTMNSCFELNPLLRHKPG IGPVAQFWMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37318; Mature: 37318
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIILLLAGFLCEYTALQALFSQQQVWIRLILFIVSHLIAAVSLALLLRLSLPRQADTK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KWGSLALFFSFAFFIPVLGCIGMLGALVYFRFLLRFDARPEFFSVPMTPFMQESGGPAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC MGEGGAWSRLRSESLPRPMRLKALLAAGSSNSRDASRLLHFATSDNDDEIRLLAFNLADQ CCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHH REKVISKTISQSLAELKNASDRDERLLHCRKLAFSYWELIFNDLAQKDLAEFYVLQSITY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATQALDMDATDPNLLLLLGRLHLWREDLESAEKAINDAMNNGAHRDRVVPYLAELAFLRR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DFVTMNSCFELNPLLRHKPGIGPVAQFWMG HHHHHHHHHHCCHHHHCCCCCCHHHHHHCC >Mature Secondary Structure MIRIILLLAGFLCEYTALQALFSQQQVWIRLILFIVSHLIAAVSLALLLRLSLPRQADTK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KWGSLALFFSFAFFIPVLGCIGMLGALVYFRFLLRFDARPEFFSVPMTPFMQESGGPAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC MGEGGAWSRLRSESLPRPMRLKALLAAGSSNSRDASRLLHFATSDNDDEIRLLAFNLADQ CCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHH REKVISKTISQSLAELKNASDRDERLLHCRKLAFSYWELIFNDLAQKDLAEFYVLQSITY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATQALDMDATDPNLLLLLGRLHLWREDLESAEKAINDAMNNGAHRDRVVPYLAELAFLRR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DFVTMNSCFELNPLLRHKPGIGPVAQFWMG HHHHHHHHHHCCHHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA