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The map label for this gene is 78223172

Identifier: 78223172

GI number: 78223172

Start: 2193370

End: 2195184

Strand: Direct

Name: 78223172

Synonym: Gmet_1965

Alternate gene names: NA

Gene position: 2193370-2195184 (Clockwise)

Preceding gene: 78223171

Following gene: 78223173

Centisome position: 54.87

GC content: 57.8

Gene sequence:

>1815_bases
ATGGCAAACCAGTACTCCGACAACAGAAGCGGAGCCGACGGCCACTTGGGAATAGTGGCGCGCCTTGCCCTGGCCTTTGT
GCTGGCATTCGCCGCCGGATGCAGCAGTGGGACCAAGGACGGTTCCTCGCCCGCCAACAACGGCAACCAGCCCGGTGGCA
GCACCCCGGTCCAGCCTTTTACGGGTCCGGATCCCAACCTGGGCATGAAGGTGCGAGATAAGGCGGCCAAGGCCGATTCC
TACGCCATCACCTACGGCCCCCTCACCAAGGCGGATATCGATACGCTCAAGACCTATCCCCTGGTCATCGTCCATCCGTA
CAACGGCAACCTCACCAGGGACCATATCATGTGGATCAAGCAAGGGGTTGACCCCAATGACCCCAGCGACAACCCGGTGG
TACTCTGCTACGTGTCCATCGGCGAGGACACCCGCACCTTCCAGCTCACCGACGCCCAGATGCGGGCTGATTCTCGTTTC
ACGGGCGACGGAAGCGGTCCGTCGATCGATCCGCGGGGCCCCGGCGTCCGATCACTGGTCGGCCTCGACCCGAAGGGGAC
ACCGACCAACGGTGGATTCGCATCGTACTATGTCAACGACAACGCCCTGCGCTGTGCCGGGGACCCGAAGAACGTACCCG
ACCAGAACGGCAACTTCAGGACCCGCTTCGTCAATGCCGGAGACCCGCTCTGGTACGACACTGTCAAAACAATGGTGATG
GATGTGAAACGCCACACCCCTCCCGGCCTGCGTCAACTCCTCACTGAAGACCCGGACGTCCAAGGATTGGGATGCGACGG
TGTCTTCCTGGACACCATCGATACGGCCGCGCCCAACAAATACACCGCCTGCTCGGACACCAATCATTCCAGCTCGGAGT
GGACCGCAAAGGGATTCTCGGATTTCATTCGAAGACTAAGGGCTGATTTCCCCAACAAAATCATTCTCCAAAACCGTGGC
CTCTTCTTCTTCGATCCACGGGAACCCCATTACCAGGTTTCGGCGCGGGGGGCCATCGATATCGGTTTCTTTGAGAGTTA
CTATCTCGACAACGATTCACAGACGGCCGTTTCCCCCTATTTCCCGGACAACAAGTACAATTCGATGCCCAAGATCATGG
CTGAAGCCAACCGTCCGCTGCCGGACGGCTTCAAGATGCTCTCCCTGGGTTATGCCAATGGATTCGGTGGACCGAAACCG
GGCATGGATGTGCAGACCCTGCTGGGGAATTCAACCACAGGATATGACATTCTGATGCAGGATATTCTGGAGGCCCATTC
GGTCGGTTTCAGGCATTACATCACCAATGCCCCCGTCGATCTGGTGAACTCGTTCGTAATGAACAATGAGAACATGAACG
ACACAACGGCACCGGCCTGGTCCAGCGTGTTCAATATCCACTATAACGATTACCCCACCAGTGCGCCCGATGTGCGTCCC
GGAATCGGGAAAATCGATCTAAGCGGCGACACCGTCACCGTGTCATGGGACGTGGCCCTGGACATGAACCGGGTCAGCTA
TGCGCTCTACTACCAGACCGTCCCCTTCAACTTCGCGCTGCCCCAACCTCTTGCCAATGCCACCAAGGCGGTCCTCACAC
CTTCGGTCGGATCAGGTTACGATCTGGTCTGGCAAACCCCTGATCCCGGGCTGGCGTTACAGAACGTTTACCCCTACCAG
AGTTCCGTAACACTTCCCGGCCTGCAGGGCGGAACCACCTACTATCTTCTCTTGCGGGCCTTCGACAGCAAGGGGAATGA
AGAAGTAAACCAAGTCGTATGGACGTGCTCAAACACAACCTGTTCAAAATTGTAA

Upstream 100 bases:

>100_bases
GGAAGGGGCCTTTTCCCAGGAAAAAGGCTCATTTGGAACAAGCGATATCAACAGCCGCCTTGACCTGAACTACCGTTACT
ATTTCAGATAGGATCAACAC

Downstream 100 bases:

>100_bases
AGGAGGCATTATGAAGAAGATATTCGTGGTTTTGCTGGTCGGCCTGCTGCTGTCCGGCTGTGTGACCCTGAGACAGGGGG
GCGGCACCGTTTCCTTCACT

Product: fibronectin, type III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 603

Protein sequence:

>604_residues
MANQYSDNRSGADGHLGIVARLALAFVLAFAAGCSSGTKDGSSPANNGNQPGGSTPVQPFTGPDPNLGMKVRDKAAKADS
YAITYGPLTKADIDTLKTYPLVIVHPYNGNLTRDHIMWIKQGVDPNDPSDNPVVLCYVSIGEDTRTFQLTDAQMRADSRF
TGDGSGPSIDPRGPGVRSLVGLDPKGTPTNGGFASYYVNDNALRCAGDPKNVPDQNGNFRTRFVNAGDPLWYDTVKTMVM
DVKRHTPPGLRQLLTEDPDVQGLGCDGVFLDTIDTAAPNKYTACSDTNHSSSEWTAKGFSDFIRRLRADFPNKIILQNRG
LFFFDPREPHYQVSARGAIDIGFFESYYLDNDSQTAVSPYFPDNKYNSMPKIMAEANRPLPDGFKMLSLGYANGFGGPKP
GMDVQTLLGNSTTGYDILMQDILEAHSVGFRHYITNAPVDLVNSFVMNNENMNDTTAPAWSSVFNIHYNDYPTSAPDVRP
GIGKIDLSGDTVTVSWDVALDMNRVSYALYYQTVPFNFALPQPLANATKAVLTPSVGSGYDLVWQTPDPGLALQNVYPYQ
SSVTLPGLQGGTTYYLLLRAFDSKGNEEVNQVVWTCSNTTCSKL

Sequences:

>Translated_604_residues
MANQYSDNRSGADGHLGIVARLALAFVLAFAAGCSSGTKDGSSPANNGNQPGGSTPVQPFTGPDPNLGMKVRDKAAKADS
YAITYGPLTKADIDTLKTYPLVIVHPYNGNLTRDHIMWIKQGVDPNDPSDNPVVLCYVSIGEDTRTFQLTDAQMRADSRF
TGDGSGPSIDPRGPGVRSLVGLDPKGTPTNGGFASYYVNDNALRCAGDPKNVPDQNGNFRTRFVNAGDPLWYDTVKTMVM
DVKRHTPPGLRQLLTEDPDVQGLGCDGVFLDTIDTAAPNKYTACSDTNHSSSEWTAKGFSDFIRRLRADFPNKIILQNRG
LFFFDPREPHYQVSARGAIDIGFFESYYLDNDSQTAVSPYFPDNKYNSMPKIMAEANRPLPDGFKMLSLGYANGFGGPKP
GMDVQTLLGNSTTGYDILMQDILEAHSVGFRHYITNAPVDLVNSFVMNNENMNDTTAPAWSSVFNIHYNDYPTSAPDVRP
GIGKIDLSGDTVTVSWDVALDMNRVSYALYYQTVPFNFALPQPLANATKAVLTPSVGSGYDLVWQTPDPGLALQNVYPYQ
SSVTLPGLQGGTTYYLLLRAFDSKGNEEVNQVVWTCSNTTCSKL
>Mature_603_residues
ANQYSDNRSGADGHLGIVARLALAFVLAFAAGCSSGTKDGSSPANNGNQPGGSTPVQPFTGPDPNLGMKVRDKAAKADSY
AITYGPLTKADIDTLKTYPLVIVHPYNGNLTRDHIMWIKQGVDPNDPSDNPVVLCYVSIGEDTRTFQLTDAQMRADSRFT
GDGSGPSIDPRGPGVRSLVGLDPKGTPTNGGFASYYVNDNALRCAGDPKNVPDQNGNFRTRFVNAGDPLWYDTVKTMVMD
VKRHTPPGLRQLLTEDPDVQGLGCDGVFLDTIDTAAPNKYTACSDTNHSSSEWTAKGFSDFIRRLRADFPNKIILQNRGL
FFFDPREPHYQVSARGAIDIGFFESYYLDNDSQTAVSPYFPDNKYNSMPKIMAEANRPLPDGFKMLSLGYANGFGGPKPG
MDVQTLLGNSTTGYDILMQDILEAHSVGFRHYITNAPVDLVNSFVMNNENMNDTTAPAWSSVFNIHYNDYPTSAPDVRPG
IGKIDLSGDTVTVSWDVALDMNRVSYALYYQTVPFNFALPQPLANATKAVLTPSVGSGYDLVWQTPDPGLALQNVYPYQS
SVTLPGLQGGTTYYLLLRAFDSKGNEEVNQVVWTCSNTTCSKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65731; Mature: 65600

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQYSDNRSGADGHLGIVARLALAFVLAFAAGCSSGTKDGSSPANNGNQPGGSTPVQPF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPDPNLGMKVRDKAAKADSYAITYGPLTKADIDTLKTYPLVIVHPYNGNLTRDHIMWIK
CCCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHH
QGVDPNDPSDNPVVLCYVSIGEDTRTFQLTDAQMRADSRFTGDGSGPSIDPRGPGVRSLV
CCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHEE
GLDPKGTPTNGGFASYYVNDNALRCAGDPKNVPDQNGNFRTRFVNAGDPLWYDTVKTMVM
CCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
DVKRHTPPGLRQLLTEDPDVQGLGCDGVFLDTIDTAAPNKYTACSDTNHSSSEWTAKGFS
HHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHH
DFIRRLRADFPNKIILQNRGLFFFDPREPHYQVSARGAIDIGFFESYYLDNDSQTAVSPY
HHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEECCCEEEEEEEEEEEECCCCCCEECCC
FPDNKYNSMPKIMAEANRPLPDGFKMLSLGYANGFGGPKPGMDVQTLLGNSTTGYDILMQ
CCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHH
DILEAHSVGFRHYITNAPVDLVNSFVMNNENMNDTTAPAWSSVFNIHYNDYPTSAPDVRP
HHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
GIGKIDLSGDTVTVSWDVALDMNRVSYALYYQTVPFNFALPQPLANATKAVLTPSVGSGY
CCCEEEECCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHCCCEEECCCCCCCC
DLVWQTPDPGLALQNVYPYQSSVTLPGLQGGTTYYLLLRAFDSKGNEEVNQVVWTCSNTT
EEEEECCCCCEEECEECCCCCCEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCH
CSKL
HCCC
>Mature Secondary Structure 
ANQYSDNRSGADGHLGIVARLALAFVLAFAAGCSSGTKDGSSPANNGNQPGGSTPVQPF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPDPNLGMKVRDKAAKADSYAITYGPLTKADIDTLKTYPLVIVHPYNGNLTRDHIMWIK
CCCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHH
QGVDPNDPSDNPVVLCYVSIGEDTRTFQLTDAQMRADSRFTGDGSGPSIDPRGPGVRSLV
CCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHEE
GLDPKGTPTNGGFASYYVNDNALRCAGDPKNVPDQNGNFRTRFVNAGDPLWYDTVKTMVM
CCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
DVKRHTPPGLRQLLTEDPDVQGLGCDGVFLDTIDTAAPNKYTACSDTNHSSSEWTAKGFS
HHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHH
DFIRRLRADFPNKIILQNRGLFFFDPREPHYQVSARGAIDIGFFESYYLDNDSQTAVSPY
HHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEECCCEEEEEEEEEEEECCCCCCEECCC
FPDNKYNSMPKIMAEANRPLPDGFKMLSLGYANGFGGPKPGMDVQTLLGNSTTGYDILMQ
CCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHH
DILEAHSVGFRHYITNAPVDLVNSFVMNNENMNDTTAPAWSSVFNIHYNDYPTSAPDVRP
HHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
GIGKIDLSGDTVTVSWDVALDMNRVSYALYYQTVPFNFALPQPLANATKAVLTPSVGSGY
CCCEEEECCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHCCCEEECCCCCCCC
DLVWQTPDPGLALQNVYPYQSSVTLPGLQGGTTYYLLLRAFDSKGNEEVNQVVWTCSNTT
EEEEECCCCCEEECEECCCCCCEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCH
CSKL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA