| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is fbp
Identifier: 78223128
GI number: 78223128
Start: 2146675
End: 2147619
Strand: Reverse
Name: fbp
Synonym: Gmet_1921
Alternate gene names: 78223128
Gene position: 2147619-2146675 (Counterclockwise)
Preceding gene: 78223133
Following gene: 78223127
Centisome position: 53.73
GC content: 54.07
Gene sequence:
>945_bases ATGCCGTTCAGTGAACCGGGCAAGACGAAATTCCAGGTAGATTTGCGCCGTCATCTCCGTAATCAAGGGATCTGCGACAA CCTCGTCCACCTCATCTGCGAGATTGCCGAGGCGAGCAAGTATGTGATCAACGCTGTTCGTACCGGTGATCTGGGCGTGG CGGGTACCTCCAACCTTTACGGCGAAGAGCAGCTTGCCCTGGACGTCCTTTCGGACAGGATTATCAAGAAACGGCTCATT CACTCCGGCGTTGTCTGTAACATTGCTTCCGAGGAAATGGATGAAATCTTCCAGGCCCAGGCCGATGCAGATGGCCTTTA CTCGGTGGCCTATGATCCCCTCGACGGTTCGTCGCTCGTGGATGTGAATCTGGCGGTTGGCACCATCGTCTCCATCTATG AGGGGTGCAATCTGCTCCAGAAAGGGCGCAACCAGGTCGCGGCCTTGTACATCCTCTATGGCCCACGGGTCTCTATGGTC TACTCCGTCGGCAGAGGGGTGCATGAATTCACCATGAACCATCTGATGGAGTTCACTCTTTCGCGCGAAAACATTGTCAT GCAGGAAGAGGGAAATATTTATGCTCCTGGTGGCCTGCGCAACAAATATCAAGAGGGGACTGAACAGTTCGTTCGTTATT TGGAGGAGAAGGGGGCCAAACTCCGGTACTCGGGCGGTTTTGTGCCGGACATCAACCAGGTTATCATGAAAGGGAAGGGC ATTTTTATGTATCCGGCCCTTAACGGATCCCCTAACGGCAAACTGAGACTCCTCTTCGAGCTTAACGCCATGGCATATCT GGTTGAAAACGCCGGTGGGGCAGCCACTGACGGGAAACAGCCGATTCTTGACCTGGAACCCCACTCCCTCGACCAACGCG CCCCTGTTTACATCGGTTGCAAGGCTGACGTGGTGAAGGCGATGGAATTTGTCAGTCGCAATTGA
Upstream 100 bases:
>100_bases ACCTCTGAACACTGGGTTGACGCTACTTTTCGCTTGATTTGCCTTACCTCTTTACATTAATCTTTAAGGGATTTTACTAT TTTATGCACAGGAGGGATGC
Downstream 100 bases:
>100_bases CAGTGATTTCGATTAACTACGAGGCTTTCATGGAAGAAAATGCGAAACAGCAACGACTTTGCACCGAGATCCAACTCTTT GATCTGTGCGACAAGGGACC
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPFSEPGKTKFQVDLRRHLRNQGICDNLVHLICEIAEASKYVINAVRTGDLGVAGTSNLYGEEQLALDVLSDRIIKKRLI HSGVVCNIASEEMDEIFQAQADADGLYSVAYDPLDGSSLVDVNLAVGTIVSIYEGCNLLQKGRNQVAALYILYGPRVSMV YSVGRGVHEFTMNHLMEFTLSRENIVMQEEGNIYAPGGLRNKYQEGTEQFVRYLEEKGAKLRYSGGFVPDINQVIMKGKG IFMYPALNGSPNGKLRLLFELNAMAYLVENAGGAATDGKQPILDLEPHSLDQRAPVYIGCKADVVKAMEFVSRN
Sequences:
>Translated_314_residues MPFSEPGKTKFQVDLRRHLRNQGICDNLVHLICEIAEASKYVINAVRTGDLGVAGTSNLYGEEQLALDVLSDRIIKKRLI HSGVVCNIASEEMDEIFQAQADADGLYSVAYDPLDGSSLVDVNLAVGTIVSIYEGCNLLQKGRNQVAALYILYGPRVSMV YSVGRGVHEFTMNHLMEFTLSRENIVMQEEGNIYAPGGLRNKYQEGTEQFVRYLEEKGAKLRYSGGFVPDINQVIMKGKG IFMYPALNGSPNGKLRLLFELNAMAYLVENAGGAATDGKQPILDLEPHSLDQRAPVYIGCKADVVKAMEFVSRN >Mature_313_residues PFSEPGKTKFQVDLRRHLRNQGICDNLVHLICEIAEASKYVINAVRTGDLGVAGTSNLYGEEQLALDVLSDRIIKKRLIH SGVVCNIASEEMDEIFQAQADADGLYSVAYDPLDGSSLVDVNLAVGTIVSIYEGCNLLQKGRNQVAALYILYGPRVSMVY SVGRGVHEFTMNHLMEFTLSRENIVMQEEGNIYAPGGLRNKYQEGTEQFVRYLEEKGAKLRYSGGFVPDINQVIMKGKGI FMYPALNGSPNGKLRLLFELNAMAYLVENAGGAATDGKQPILDLEPHSLDQRAPVYIGCKADVVKAMEFVSRN
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family
Homologues:
Organism=Homo sapiens, GI22907028, Length=325, Percent_Identity=35.6923076923077, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI189083692, Length=325, Percent_Identity=35.0769230769231, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI16579888, Length=325, Percent_Identity=35.0769230769231, Blast_Score=169, Evalue=4e-42, Organism=Escherichia coli, GI1790679, Length=267, Percent_Identity=40.0749063670412, Blast_Score=182, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17508131, Length=317, Percent_Identity=38.4858044164038, Blast_Score=204, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6323409, Length=327, Percent_Identity=31.1926605504587, Blast_Score=156, Evalue=4e-39, Organism=Drosophila melanogaster, GI45550998, Length=321, Percent_Identity=35.5140186915888, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI19921562, Length=321, Percent_Identity=35.5140186915888, Blast_Score=171, Evalue=8e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): F16PA_GEOMG (Q39UC4)
Other databases:
- EMBL: CP000148 - RefSeq: YP_384875.1 - HSSP: P0A993 - ProteinModelPortal: Q39UC4 - SMR: Q39UC4 - STRING: Q39UC4 - GeneID: 3738105 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_1921 - NMPDR: fig|269799.3.peg.2184 - eggNOG: COG0158 - HOGENOM: HBG731261 - OMA: HWEAPVQ - PhylomeDB: Q39UC4 - ProtClustDB: PRK09293 - BioCyc: GMET269799:GMET_1921-MONOMER - GO: GO:0005737 - HAMAP: MF_01855 - InterPro: IPR000146 - InterPro: IPR023079 - PANTHER: PTHR11556 - PRINTS: PR01958
Pfam domain/function: PF00316 FBPase
EC number: =3.1.3.11
Molecular weight: Translated: 34634; Mature: 34503
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00124 FBPASE
Important sites: BINDING 223-223 BINDING 254-254
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSEPGKTKFQVDLRRHLRNQGICDNLVHLICEIAEASKYVINAVRTGDLGVAGTSNLY CCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC GEEQLALDVLSDRIIKKRLIHSGVVCNIASEEMDEIFQAQADADGLYSVAYDPLDGSSLV CCHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCEE DVNLAVGTIVSIYEGCNLLQKGRNQVAALYILYGPRVSMVYSVGRGVHEFTMNHLMEFTL EEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHC SRENIVMQEEGNIYAPGGLRNKYQEGTEQFVRYLEEKGAKLRYSGGFVPDINQVIMKGKG CCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCC IFMYPALNGSPNGKLRLLFELNAMAYLVENAGGAATDGKQPILDLEPHSLDQRAPVYIGC EEEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEC KADVVKAMEFVSRN HHHHHHHHHHHHCC >Mature Secondary Structure PFSEPGKTKFQVDLRRHLRNQGICDNLVHLICEIAEASKYVINAVRTGDLGVAGTSNLY CCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC GEEQLALDVLSDRIIKKRLIHSGVVCNIASEEMDEIFQAQADADGLYSVAYDPLDGSSLV CCHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCEE DVNLAVGTIVSIYEGCNLLQKGRNQVAALYILYGPRVSMVYSVGRGVHEFTMNHLMEFTL EEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHC SRENIVMQEEGNIYAPGGLRNKYQEGTEQFVRYLEEKGAKLRYSGGFVPDINQVIMKGKG CCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCC IFMYPALNGSPNGKLRLLFELNAMAYLVENAGGAATDGKQPILDLEPHSLDQRAPVYIGC EEEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEC KADVVKAMEFVSRN HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA