| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yqeW [H]
Identifier: 78223036
GI number: 78223036
Start: 2043228
End: 2044859
Strand: Reverse
Name: yqeW [H]
Synonym: Gmet_1829
Alternate gene names: 78223036
Gene position: 2044859-2043228 (Counterclockwise)
Preceding gene: 78223037
Following gene: 78223035
Centisome position: 51.15
GC content: 57.54
Gene sequence:
>1632_bases ATGACTATCCTCTATGTCCTTGAGGCCCTGGGGGGGCTCGGCCTTTTCATCCTCGGCATGAAGACCATGACCGAAGGACT CCAGAAGCTTGCCGGCGACAGGTTCCGCCGAACTCTGGAGAGGGTTGCCGGTAATCGGCTGGCCGCGGCCCTTCTTGGCA GTTCACTTTCGTCACTTCTCCAATCGTCGAGCGCCGCCTGCATCATTACCATCGGCTTTGTCAACGCCGGGCTCATTTCC CTCTACCAGGCCCTGGGAATTCTCCTCGGCACCGGCATCGGCACGACACTGGCGGTCCAGTTCATCGCCTTCAAGATTAC TTCCTTCGCCCTTCCCGCTATCTTCATCGGGGTGGCACTCAGGTTCTTCGTGCGCCGCCGCCGCTGGGTGAACGCCGGCG AGTTGCTACTCGGCGCAGGGCTCCTCTTTCTCGGCCTCCGCGTAATGGAGGCAAATCTCCAGCCCCTGCAGCAGAACGCC ATAATCTTCGGCCACGACACGTTCTTGATTTCCAAGCACCTTACAGCCGTTCTCTTCGGGGCACTCCTCACCCTCCTCGT GCAGTCGGGAAGTACCGCGATCGGCATCGTCATGGCCCTGGCAGGAAGCGGGCTCGTCTCCTTCGAGACGGGTGCCGCAA TGGTCATCGGCGAACTTGTCGGCACATCGGTCATCACTGCTGTTGCATCCATAGGGGGTACCCTTGAAGCGAAGCGCGCA GTCTTTTTCTACTTTGTAATCAATATATTTGCCGTTACCGTTGTGATGCTCTTTTTTCCTGCATTCATCGAGTTCGTCGT TACCCTGTCGCCTGCGGATCTTTCCTCGTCAGCCTCGGTTTCGCGGGTGCTGGCCAATACCCACACGGTCTTCAGCATCC TCAGCGCCTGCATCTTCCTTCCCCTCATCGGCTTCTTCGCCCGCTCGGCCCCTCGCATCATTCCCGGCAGCGAGCGGGCT TCCAGTGTCGAAGCACGGACGGTCTTCATTGACAACCGCGTCATCAACACCCCTCCCATCGCACTTCTCCAGGCCCGGAA CGAACTGAGAAGAATGGCCGGAATCACCCGCACCATGTACGATGAAATGGTCGAGCAGTTCTTCCGCTATGATGCCAAGA AGTCCACTGCCATTGCCCAGAAGGAGAACACCATCGACATCCTCCAGAGGGATCTGTCCGATTTTTTGGTGACCCTTTCG CGGCAGCCGCTCCCACCGGAAGAGTCAATGGATATTCCGGTCATGCTGCAGCTCATCAGTGAGCTTGAGCATGTTGCGGA CCAGTCTGAGGCGATCCTCGATTATTTGCGAAAGAAGAAAGAGGAAAAACTCCTCTTCTCAACCACGGCAATGCACGAGA TCAGGAATCTGGCGCGCAAGGCAGAGGAAATGGTTGCTCTGGCGGTGGAAACAATCGAAACTCCTGCCGCGGATGCCATT GAAAAGGGGCGGGGGCTGAGGGACGAGGTGGTGCAGATGCGGGAGGCGATGCTCAATGGGCATATCAAGCGCCTCTCCAC CGGCAAGTGCACAGTGCGGGCCGGGATCATCTACGCTGACATGATTTCGGCGTTTGCCAAAGTAGCCGATTCCTGTCTCA CCATCATAGAAACCAGGAGGGAATTCACCTGA
Upstream 100 bases:
>100_bases GAAGCTCCTCGTCTTCCGGAAGGGGGCGTCAAAATCCGCACCGCCCGATTTTACCTTCCCCTTTGTCATCTCCAAATAAC GCGCAAGGACACGGACGTCC
Downstream 100 bases:
>100_bases TGCATGACGTACTGGCATCCATTGACCTTGGCACCAACACGGCTCGGCTCCTCATCGGGAAAGTGGAGGGAGGAGCTGTG GCCCCGATTCTCGTCAAGCG
Product: Na+/Pi-cotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MTILYVLEALGGLGLFILGMKTMTEGLQKLAGDRFRRTLERVAGNRLAAALLGSSLSSLLQSSSAACIITIGFVNAGLIS LYQALGILLGTGIGTTLAVQFIAFKITSFALPAIFIGVALRFFVRRRRWVNAGELLLGAGLLFLGLRVMEANLQPLQQNA IIFGHDTFLISKHLTAVLFGALLTLLVQSGSTAIGIVMALAGSGLVSFETGAAMVIGELVGTSVITAVASIGGTLEAKRA VFFYFVINIFAVTVVMLFFPAFIEFVVTLSPADLSSSASVSRVLANTHTVFSILSACIFLPLIGFFARSAPRIIPGSERA SSVEARTVFIDNRVINTPPIALLQARNELRRMAGITRTMYDEMVEQFFRYDAKKSTAIAQKENTIDILQRDLSDFLVTLS RQPLPPEESMDIPVMLQLISELEHVADQSEAILDYLRKKKEEKLLFSTTAMHEIRNLARKAEEMVALAVETIETPAADAI EKGRGLRDEVVQMREAMLNGHIKRLSTGKCTVRAGIIYADMISAFAKVADSCLTIIETRREFT
Sequences:
>Translated_543_residues MTILYVLEALGGLGLFILGMKTMTEGLQKLAGDRFRRTLERVAGNRLAAALLGSSLSSLLQSSSAACIITIGFVNAGLIS LYQALGILLGTGIGTTLAVQFIAFKITSFALPAIFIGVALRFFVRRRRWVNAGELLLGAGLLFLGLRVMEANLQPLQQNA IIFGHDTFLISKHLTAVLFGALLTLLVQSGSTAIGIVMALAGSGLVSFETGAAMVIGELVGTSVITAVASIGGTLEAKRA VFFYFVINIFAVTVVMLFFPAFIEFVVTLSPADLSSSASVSRVLANTHTVFSILSACIFLPLIGFFARSAPRIIPGSERA SSVEARTVFIDNRVINTPPIALLQARNELRRMAGITRTMYDEMVEQFFRYDAKKSTAIAQKENTIDILQRDLSDFLVTLS RQPLPPEESMDIPVMLQLISELEHVADQSEAILDYLRKKKEEKLLFSTTAMHEIRNLARKAEEMVALAVETIETPAADAI EKGRGLRDEVVQMREAMLNGHIKRLSTGKCTVRAGIIYADMISAFAKVADSCLTIIETRREFT >Mature_542_residues TILYVLEALGGLGLFILGMKTMTEGLQKLAGDRFRRTLERVAGNRLAAALLGSSLSSLLQSSSAACIITIGFVNAGLISL YQALGILLGTGIGTTLAVQFIAFKITSFALPAIFIGVALRFFVRRRRWVNAGELLLGAGLLFLGLRVMEANLQPLQQNAI IFGHDTFLISKHLTAVLFGALLTLLVQSGSTAIGIVMALAGSGLVSFETGAAMVIGELVGTSVITAVASIGGTLEAKRAV FFYFVINIFAVTVVMLFFPAFIEFVVTLSPADLSSSASVSRVLANTHTVFSILSACIFLPLIGFFARSAPRIIPGSERAS SVEARTVFIDNRVINTPPIALLQARNELRRMAGITRTMYDEMVEQFFRYDAKKSTAIAQKENTIDILQRDLSDFLVTLSR QPLPPEESMDIPVMLQLISELEHVADQSEAILDYLRKKKEEKLLFSTTAMHEIRNLARKAEEMVALAVETIETPAADAIE KGRGLRDEVVQMREAMLNGHIKRLSTGKCTVRAGIIYADMISAFAKVADSCLTIIETRREFT
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=434, Percent_Identity=23.5023041474654, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59025; Mature: 58894
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS00605 ATPASE_C
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILYVLEALGGLGLFILGMKTMTEGLQKLAGDRFRRTLERVAGNRLAAALLGSSLSSLL CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH QSSSAACIITIGFVNAGLISLYQALGILLGTGIGTTLAVQFIAFKITSFALPAIFIGVAL HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFFVRRRRWVNAGELLLGAGLLFLGLRVMEANLQPLQQNAIIFGHDTFLISKHLTAVLFG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECHHHHHHHHHHHHHHH ALLTLLVQSGSTAIGIVMALAGSGLVSFETGAAMVIGELVGTSVITAVASIGGTLEAKRA HHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VFFYFVINIFAVTVVMLFFPAFIEFVVTLSPADLSSSASVSRVLANTHTVFSILSACIFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLIGFFARSAPRIIPGSERASSVEARTVFIDNRVINTPPIALLQARNELRRMAGITRTMY HHHHHHHCCCCCCCCCCCCCCCCHHEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHH DEMVEQFFRYDAKKSTAIAQKENTIDILQRDLSDFLVTLSRQPLPPEESMDIPVMLQLIS HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ELEHVADQSEAILDYLRKKKEEKLLFSTTAMHEIRNLARKAEEMVALAVETIETPAADAI HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EKGRGLRDEVVQMREAMLNGHIKRLSTGKCTVRAGIIYADMISAFAKVADSCLTIIETRR HHCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EFT CCC >Mature Secondary Structure TILYVLEALGGLGLFILGMKTMTEGLQKLAGDRFRRTLERVAGNRLAAALLGSSLSSLL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH QSSSAACIITIGFVNAGLISLYQALGILLGTGIGTTLAVQFIAFKITSFALPAIFIGVAL HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFFVRRRRWVNAGELLLGAGLLFLGLRVMEANLQPLQQNAIIFGHDTFLISKHLTAVLFG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECHHHHHHHHHHHHHHH ALLTLLVQSGSTAIGIVMALAGSGLVSFETGAAMVIGELVGTSVITAVASIGGTLEAKRA HHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VFFYFVINIFAVTVVMLFFPAFIEFVVTLSPADLSSSASVSRVLANTHTVFSILSACIFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLIGFFARSAPRIIPGSERASSVEARTVFIDNRVINTPPIALLQARNELRRMAGITRTMY HHHHHHHCCCCCCCCCCCCCCCCHHEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHH DEMVEQFFRYDAKKSTAIAQKENTIDILQRDLSDFLVTLSRQPLPPEESMDIPVMLQLIS HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ELEHVADQSEAILDYLRKKKEEKLLFSTTAMHEIRNLARKAEEMVALAVETIETPAADAI HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EKGRGLRDEVVQMREAMLNGHIKRLSTGKCTVRAGIIYADMISAFAKVADSCLTIIETRR HHCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EFT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]