| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is braC [H]
Identifier: 78223030
GI number: 78223030
Start: 2036801
End: 2037943
Strand: Reverse
Name: braC [H]
Synonym: Gmet_1823
Alternate gene names: 78223030
Gene position: 2037943-2036801 (Counterclockwise)
Preceding gene: 78223031
Following gene: 78223029
Centisome position: 50.98
GC content: 57.66
Gene sequence:
>1143_bases ATGCTGAAGAAAAGTTCTTTCATACTGACGTTTGTCGTGTCGCTGGCTCTTCTGGCCGGAAGCGCCCTTGCGGCTCCCCC CATCAAGATCGGCGGGCTCTTCGCTGTGACTGGTCCTGCATCGTTCCTTGGCGAGCCTGAGCGCAACACCGCCCAGATGG TGGTGAACGGGATCAATGCTGCCGGTGGCGTCAAAGGTCGCAAGCTTGAACTGATCGCCTACGACACGCAAGGGGATGCC ACCAAGGCGGTGCAGGCTGCCAACCGCCTCATCAAAGAGGACAAGGTTGCCGCAATCATAGGCCCCAGCACCACTGGTGA CACCATGGCCGTCATTCCGGTTGTGGAACGGGCAAGAATTCCGATGATTTCCTGTGCCGCCGGAAGCAAAATCACCGAGC CGGTCAAAAAGTGGATTTTCAAGACCGCTCAGAATGATGGCCTCGCCGTGGCGAGAATCTATGGGGATCTGAAGAGGAAA AAAATATCAAAGATTGCTATCCTCACCGTTTCCGACGGTTTCGGTTCGTCGGGACGCGAGCAGCTGAAGGCGCAGGCATC GGCCTACGGGATCAGGATCGTGTCTGACGACACCTATGGCCCGAAGGATACCGACATGACAGCCCAGCTTACCAAAATCA AGGGGAGCGGCGCCCAGGCCGTCATCTGCTGGGGCACCAATCCGGGGCCGGCAGTGGTTGCCCGCAACGCCAAGCAGCTT GGCCTGAAGCTTCCCCTCTACATGAGCCACGGCGTTTCCTCCAAGAAGTTCATCGGTCTTGCCGGAGGTGCTGCCGAAGG AATCCTTCTCCCGTCCGGACGAGTTATCGTGGCCGATCTGCTTCCCAATTCAGACCGTCAGAAAAAGTCCCTTCTTGCCT TCGTGAAGGATTACCAGAAGCACTACAAGGCGGAGGGTGACCACTTTGGCGGCCATGCCTGGGATGCGATCATGCTTCTC AAAGGCGCTATCGAGCGTGGCGGCGAAAATCCGGCAGCCATACGGGACCAGCTGGAACGGACGCGGGGCTTTGCCGGCAT CGGCGGTGTTTTCAGCTACTCTCCTTCCGATCACGCGGGACTCACCAAGGACGCTTTCGTCCTTGTGGAGATAAGAAAAC AAGATTTCGCCCTGGTCAAGTAA
Upstream 100 bases:
>100_bases GGCGCCCGGCTCTACGCCATGTGATCGCTACGCTGGGAGAGCCGCGGGGATCATCAGGGGAGACTGGGAGTTGGTGAAGT AATCAACGGGGAGGTTGTCC
Downstream 100 bases:
>100_bases CCGCTTAATCATACATGGACCTTCAACCAATCAAGGGAGCGCAGGCTTTGTCGGTCTGCGCTCCCTCCTTGTGAGCCAGA CACATAATCTATGCATATCG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MLKKSSFILTFVVSLALLAGSALAAPPIKIGGLFAVTGPASFLGEPERNTAQMVVNGINAAGGVKGRKLELIAYDTQGDA TKAVQAANRLIKEDKVAAIIGPSTTGDTMAVIPVVERARIPMISCAAGSKITEPVKKWIFKTAQNDGLAVARIYGDLKRK KISKIAILTVSDGFGSSGREQLKAQASAYGIRIVSDDTYGPKDTDMTAQLTKIKGSGAQAVICWGTNPGPAVVARNAKQL GLKLPLYMSHGVSSKKFIGLAGGAAEGILLPSGRVIVADLLPNSDRQKKSLLAFVKDYQKHYKAEGDHFGGHAWDAIMLL KGAIERGGENPAAIRDQLERTRGFAGIGGVFSYSPSDHAGLTKDAFVLVEIRKQDFALVK
Sequences:
>Translated_380_residues MLKKSSFILTFVVSLALLAGSALAAPPIKIGGLFAVTGPASFLGEPERNTAQMVVNGINAAGGVKGRKLELIAYDTQGDA TKAVQAANRLIKEDKVAAIIGPSTTGDTMAVIPVVERARIPMISCAAGSKITEPVKKWIFKTAQNDGLAVARIYGDLKRK KISKIAILTVSDGFGSSGREQLKAQASAYGIRIVSDDTYGPKDTDMTAQLTKIKGSGAQAVICWGTNPGPAVVARNAKQL GLKLPLYMSHGVSSKKFIGLAGGAAEGILLPSGRVIVADLLPNSDRQKKSLLAFVKDYQKHYKAEGDHFGGHAWDAIMLL KGAIERGGENPAAIRDQLERTRGFAGIGGVFSYSPSDHAGLTKDAFVLVEIRKQDFALVK >Mature_380_residues MLKKSSFILTFVVSLALLAGSALAAPPIKIGGLFAVTGPASFLGEPERNTAQMVVNGINAAGGVKGRKLELIAYDTQGDA TKAVQAANRLIKEDKVAAIIGPSTTGDTMAVIPVVERARIPMISCAAGSKITEPVKKWIFKTAQNDGLAVARIYGDLKRK KISKIAILTVSDGFGSSGREQLKAQASAYGIRIVSDDTYGPKDTDMTAQLTKIKGSGAQAVICWGTNPGPAVVARNAKQL GLKLPLYMSHGVSSKKFIGLAGGAAEGILLPSGRVIVADLLPNSDRQKKSLLAFVKDYQKHYKAEGDHFGGHAWDAIMLL KGAIERGGENPAAIRDQLERTRGFAGIGGVFSYSPSDHAGLTKDAFVLVEIRKQDFALVK
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=274, Percent_Identity=27.7372262773723, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI48994941, Length=266, Percent_Identity=28.1954887218045, Blast_Score=79, Evalue=7e-16,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40100; Mature: 40100
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKSSFILTFVVSLALLAGSALAAPPIKIGGLFAVTGPASFLGEPERNTAQMVVNGINA CCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEECCCHHHCCCCCCCHHHHHEECCCC AGGVKGRKLELIAYDTQGDATKAVQAANRLIKEDKVAAIIGPSTTGDTMAVIPVVERARI CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHCCCC PMISCAAGSKITEPVKKWIFKTAQNDGLAVARIYGDLKRKKISKIAILTVSDGFGSSGRE CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCHH QLKAQASAYGIRIVSDDTYGPKDTDMTAQLTKIKGSGAQAVICWGTNPGPAVVARNAKQL HHHHHHHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEECCHHHC GLKLPLYMSHGVSSKKFIGLAGGAAEGILLPSGRVIVADLLPNSDRQKKSLLAFVKDYQK CCCCCCHHHCCCCCCEEEEEECCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHH HYKAEGDHFGGHAWDAIMLLKGAIERGGENPAAIRDQLERTRGFAGIGGVFSYSPSDHAG HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC LTKDAFVLVEIRKQDFALVK CCCCEEEEEEEECCCCEECC >Mature Secondary Structure MLKKSSFILTFVVSLALLAGSALAAPPIKIGGLFAVTGPASFLGEPERNTAQMVVNGINA CCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEECCCHHHCCCCCCCHHHHHEECCCC AGGVKGRKLELIAYDTQGDATKAVQAANRLIKEDKVAAIIGPSTTGDTMAVIPVVERARI CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHCCCC PMISCAAGSKITEPVKKWIFKTAQNDGLAVARIYGDLKRKKISKIAILTVSDGFGSSGRE CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCHH QLKAQASAYGIRIVSDDTYGPKDTDMTAQLTKIKGSGAQAVICWGTNPGPAVVARNAKQL HHHHHHHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEECCHHHC GLKLPLYMSHGVSSKKFIGLAGGAAEGILLPSGRVIVADLLPNSDRQKKSLLAFVKDYQK CCCCCCHHHCCCCCCEEEEEECCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHH HYKAEGDHFGGHAWDAIMLLKGAIERGGENPAAIRDQLERTRGFAGIGGVFSYSPSDHAG HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC LTKDAFVLVEIRKQDFALVK CCCCEEEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]