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The map label for this gene is 78223006

Identifier: 78223006

GI number: 78223006

Start: 2013519

End: 2014112

Strand: Direct

Name: 78223006

Synonym: Gmet_1798

Alternate gene names: NA

Gene position: 2013519-2014112 (Clockwise)

Preceding gene: 78223005

Following gene: 78223009

Centisome position: 50.37

GC content: 55.72

Gene sequence:

>594_bases
ATGAACCGAGCCGATAAGGCAATAGTCCTATATCAGACTCCGGACGGGTCATCTTCTCTTCAAGTCCATCTCGACCATGA
CACCGTCTGGCTTACACAGAAGCAGATGGCCGAACTGTTTGGAAAGGATGTCAGAACCGTCAACGAACACATCAGGAACA
TCTTCAGGGAAGGGGAGCTTGATGATGCTTCAGTTATCCGGAAATTCCGGATAACTGCCTCAGACGGTAAAAGCTACGAT
ACGGCCCACTACAACCTCGACGTGATAATTTCCGTAGGCTACCGGGTGAAGTCACAGCAAGGGACCCGCTTCCGCCAATG
GGCGACCAGGGTGCTGCATGACCATATCGTCAAGGGGTACACGCTCAACGAGCAGCGGCTGCGGGAGGAGAGCGCCAAGT
TGCAGGCGATGCAGCAGACGGTGGCATTGCTGGCGCGGACCCTGACCAATCAGGAGCTTGTCAGCGATACCGGCCGGGAC
GTGCTGCGGGTCATCGACGATTACGCCTATGCGCTGGCAACCCTTGACCGTTACGACCACGGGACGCTGGCCATCGAAGG
AATTACCCGCCAGGCCCAACAGAGAATTGTATAA

Upstream 100 bases:

>100_bases
GTTCTGTAGGAGCTTCAGCGAGCTGTTAAAACCTCTACTGGCAGTGGGTCGTACCGCTGGGCCAGACCAGCAGCATCACC
GAACTTTATGAGGAACCTGT

Downstream 100 bases:

>100_bases
AACAAAGGTGTACCTCTATCACAAGGATGGTCACAGAATCCCTGTATCAGTTCGTGTCACCCCCATGACCGATGAAGAAG
GCAACATTATCGGCAAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNRADKAIVLYQTPDGSSSLQVHLDHDTVWLTQKQMAELFGKDVRTVNEHIRNIFREGELDDASVIRKFRITASDGKSYD
TAHYNLDVIISVGYRVKSQQGTRFRQWATRVLHDHIVKGYTLNEQRLREESAKLQAMQQTVALLARTLTNQELVSDTGRD
VLRVIDDYAYALATLDRYDHGTLAIEGITRQAQQRIV

Sequences:

>Translated_197_residues
MNRADKAIVLYQTPDGSSSLQVHLDHDTVWLTQKQMAELFGKDVRTVNEHIRNIFREGELDDASVIRKFRITASDGKSYD
TAHYNLDVIISVGYRVKSQQGTRFRQWATRVLHDHIVKGYTLNEQRLREESAKLQAMQQTVALLARTLTNQELVSDTGRD
VLRVIDDYAYALATLDRYDHGTLAIEGITRQAQQRIV
>Mature_197_residues
MNRADKAIVLYQTPDGSSSLQVHLDHDTVWLTQKQMAELFGKDVRTVNEHIRNIFREGELDDASVIRKFRITASDGKSYD
TAHYNLDVIISVGYRVKSQQGTRFRQWATRVLHDHIVKGYTLNEQRLREESAKLQAMQQTVALLARTLTNQELVSDTGRD
VLRVIDDYAYALATLDRYDHGTLAIEGITRQAQQRIV

Specific function: Unknown

COG id: COG3943

COG function: function code R; Virulence protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22588; Mature: 22588

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRADKAIVLYQTPDGSSSLQVHLDHDTVWLTQKQMAELFGKDVRTVNEHIRNIFREGEL
CCCCCCEEEEEECCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDASVIRKFRITASDGKSYDTAHYNLDVIISVGYRVKSQQGTRFRQWATRVLHDHIVKGY
CHHHHHHHHEEEECCCCCCCEEEECEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHCCC
TLNEQRLREESAKLQAMQQTVALLARTLTNQELVSDTGRDVLRVIDDYAYALATLDRYDH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTLAIEGITRQAQQRIV
CCEEEHHHHHHHHHCCC
>Mature Secondary Structure
MNRADKAIVLYQTPDGSSSLQVHLDHDTVWLTQKQMAELFGKDVRTVNEHIRNIFREGEL
CCCCCCEEEEEECCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDASVIRKFRITASDGKSYDTAHYNLDVIISVGYRVKSQQGTRFRQWATRVLHDHIVKGY
CHHHHHHHHEEEECCCCCCCEEEECEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHCCC
TLNEQRLREESAKLQAMQQTVALLARTLTNQELVSDTGRDVLRVIDDYAYALATLDRYDH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTLAIEGITRQAQQRIV
CCEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA