Click here to switch to the map view.

The map label for this gene is 78223001

Identifier: 78223001

GI number: 78223001

Start: 2006185

End: 2006721

Strand: Direct

Name: 78223001

Synonym: Gmet_1792

Alternate gene names: NA

Gene position: 2006185-2006721 (Clockwise)

Preceding gene: 78223000

Following gene: 78223002

Centisome position: 50.19

GC content: 55.87

Gene sequence:

>537_bases
ATGAAACCGCTCAAAGAGATGACCATTGGCGAAATTGCCGCCTATGTGGCCGCACACCTTCGCCAGGGCGGCGTCGAAGT
GGTACTGACAGGCGGCAGCTGCGTCTCAATCTACACAGACAACCGCTATCTCTCCTATGACCTGGACTTCATTGAAGTGG
GCAGAGCCTCCAGAAAGAAAATTGCTGCCATCCTCATGGAGATCGGCTTCCTGGAGAAGGATCGCTACTTTATCCATCCT
GACACAATGTATTTCGTGGAATTTCCTTCCGGCCCGCTGGCACTCGGCGCCGAACCCGCTGGTGCCATAGCAGAGCTTGA
GTTTGCCACCGGCACGTTGCGCCTCCTCTCTCCGACCGATTGCGTCAAGGACCGGCTGGCCGGTTATTACCATTGGCTGG
ATCGACAGTGCCTGGAGCAGGCGATCATGGTGGCACACGATGCTGAGATTGACTTGGAAGAGGTGGAACGCTGGTCGCAG
CAGGAAGGAATGGGGGAGGAGTTCGAACGGATCAAGACCTTTTTGCTGGCACAATGA

Upstream 100 bases:

>100_bases
TGAGGGCCCTGCTGGACAAGGCACTGACCTTTTACCCAGAGGATATTCGCGTTGGCCTCCAGGAAAACAGGCGTCGGCCG
CGGCGCAAGGGCAAGCCGCT

Downstream 100 bases:

>100_bases
AATGAAAGATATGGTGAGAGTAGAAAATGGATTCTGTTGATACGAGATGAGTATTGTGTCCCCCGAATTCTGTCATGTTT
GAGGATAACCGAAGGGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKPLKEMTIGEIAAYVAAHLRQGGVEVVLTGGSCVSIYTDNRYLSYDLDFIEVGRASRKKIAAILMEIGFLEKDRYFIHP
DTMYFVEFPSGPLALGAEPAGAIAELEFATGTLRLLSPTDCVKDRLAGYYHWLDRQCLEQAIMVAHDAEIDLEEVERWSQ
QEGMGEEFERIKTFLLAQ

Sequences:

>Translated_178_residues
MKPLKEMTIGEIAAYVAAHLRQGGVEVVLTGGSCVSIYTDNRYLSYDLDFIEVGRASRKKIAAILMEIGFLEKDRYFIHP
DTMYFVEFPSGPLALGAEPAGAIAELEFATGTLRLLSPTDCVKDRLAGYYHWLDRQCLEQAIMVAHDAEIDLEEVERWSQ
QEGMGEEFERIKTFLLAQ
>Mature_178_residues
MKPLKEMTIGEIAAYVAAHLRQGGVEVVLTGGSCVSIYTDNRYLSYDLDFIEVGRASRKKIAAILMEIGFLEKDRYFIHP
DTMYFVEFPSGPLALGAEPAGAIAELEFATGTLRLLSPTDCVKDRLAGYYHWLDRQCLEQAIMVAHDAEIDLEEVERWSQ
QEGMGEEFERIKTFLLAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20043; Mature: 20043

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLKEMTIGEIAAYVAAHLRQGGVEVVLTGGSCVSIYTDNRYLSYDLDFIEVGRASRKK
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEECCCHHHHCCHHHHH
IAAILMEIGFLEKDRYFIHPDTMYFVEFPSGPLALGAEPAGAIAELEFATGTLRLLSPTD
HHHHHHHHCCCCCCCEEECCCEEEEEECCCCCEEECCCCCCCEEEEEECCCEEEEECCHH
CVKDRLAGYYHWLDRQCLEQAIMVAHDAEIDLEEVERWSQQEGMGEEFERIKTFLLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKPLKEMTIGEIAAYVAAHLRQGGVEVVLTGGSCVSIYTDNRYLSYDLDFIEVGRASRKK
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEECCCHHHHCCHHHHH
IAAILMEIGFLEKDRYFIHPDTMYFVEFPSGPLALGAEPAGAIAELEFATGTLRLLSPTD
HHHHHHHHCCCCCCCEEECCCEEEEEECCCCCEEECCCCCCCEEEEEECCCEEEEECCHH
CVKDRLAGYYHWLDRQCLEQAIMVAHDAEIDLEEVERWSQQEGMGEEFERIKTFLLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA