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The map label for this gene is ygdQ [C]

Identifier: 78222991

GI number: 78222991

Start: 1998342

End: 1999088

Strand: Reverse

Name: ygdQ [C]

Synonym: Gmet_1782

Alternate gene names: 78222991

Gene position: 1999088-1998342 (Counterclockwise)

Preceding gene: 78222992

Following gene: 78222990

Centisome position: 50.01

GC content: 58.1

Gene sequence:

>747_bases
ATGGAATGGCTTACCGACCCCCAGGCGTGGATCGCCCTTGCTACCCTTACTGCGCTCGAGATCGTTCTCGGCATCGACAA
TATAATTTTCATCTCTATCCTGGCGGGGAAACTCCCCCGTGAGCAGCAGGAAAAAGCCCGCGTCACCGGTCTTGCCCTTG
CCATGTTCACCCGCGTGGGGCTCCTTTTCTCCCTCACCTGGCTCATGGGTCTTACGGCACCGCTCTTCTCCGTGGTGGGC
CGCGAGATTTCGGGCCGTGACCTGATCCTCATCGCCGGCGGCCTGTTTCTTCTGGCCAAGAGCACCATGGAAATTCATGA
AAAACTGGAAGGCGACGAAGGCCACTCCTCGACCAGGGCCGCGGCGTCGTTCGCCGGGACCATCGTCCAGATCCTCCTCT
TGGACATTGTCTTCTCCCTCGACTCCATCATCACCGCCATCGGCATGGCCAACAAGCTGGCGGTCATGGTGCTGGCGGTC
ATCATCGCAGTGGGCTTCATGATGTTCTTCTCGGGGAACATCAGCGCCTTCGTGCATAAGCATCCCACCATAAAAATGCT
GGCACTCTCCTTCCTGATCCTTATCGGTGTTGCCCTCATCGGAGACGGCCTCGAAATGCACATTCCCAAGGGATATATCT
ATTTCGCCATGGCATTCTCCGTGGGGGTCGAGATGCTCAACATGCGGATGCGCGCCAAAGGCAAGCCCGTGAAGCTCCAT
GAGCCGTACCTGGAGGAGGGACGGTAG

Upstream 100 bases:

>100_bases
ATAACGACCTCTCGGCGCTCCGGGAGATTGCGGTTGACAGTGCCAACCCCTCTCGGTATATGTGTGCTCCTTCACATTAC
GCTATCAAGGAGTTCTTCAG

Downstream 100 bases:

>100_bases
GCTCGTTCACTTTTGAACCGCTCTCTGGTAGACTGTGATGTAATTACTTTGTTACCGGTGGGACACCATGAAAAGAACCT
TTATCTGGATGGTGTTTCCC

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MEWLTDPQAWIALATLTALEIVLGIDNIIFISILAGKLPREQQEKARVTGLALAMFTRVGLLFSLTWLMGLTAPLFSVVG
REISGRDLILIAGGLFLLAKSTMEIHEKLEGDEGHSSTRAAASFAGTIVQILLLDIVFSLDSIITAIGMANKLAVMVLAV
IIAVGFMMFFSGNISAFVHKHPTIKMLALSFLILIGVALIGDGLEMHIPKGYIYFAMAFSVGVEMLNMRMRAKGKPVKLH
EPYLEEGR

Sequences:

>Translated_248_residues
MEWLTDPQAWIALATLTALEIVLGIDNIIFISILAGKLPREQQEKARVTGLALAMFTRVGLLFSLTWLMGLTAPLFSVVG
REISGRDLILIAGGLFLLAKSTMEIHEKLEGDEGHSSTRAAASFAGTIVQILLLDIVFSLDSIITAIGMANKLAVMVLAV
IIAVGFMMFFSGNISAFVHKHPTIKMLALSFLILIGVALIGDGLEMHIPKGYIYFAMAFSVGVEMLNMRMRAKGKPVKLH
EPYLEEGR
>Mature_248_residues
MEWLTDPQAWIALATLTALEIVLGIDNIIFISILAGKLPREQQEKARVTGLALAMFTRVGLLFSLTWLMGLTAPLFSVVG
REISGRDLILIAGGLFLLAKSTMEIHEKLEGDEGHSSTRAAASFAGTIVQILLLDIVFSLDSIITAIGMANKLAVMVLAV
IIAVGFMMFFSGNISAFVHKHPTIKMLALSFLILIGVALIGDGLEMHIPKGYIYFAMAFSVGVEMLNMRMRAKGKPVKLH
EPYLEEGR

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=235, Percent_Identity=57.8723404255319, Blast_Score=251, Evalue=4e-68,
Organism=Escherichia coli, GI1788119, Length=234, Percent_Identity=51.2820512820513, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI87082033, Length=229, Percent_Identity=52.4017467248908, Blast_Score=227, Evalue=5e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 27002; Mature: 27002

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLTDPQAWIALATLTALEIVLGIDNIIFISILAGKLPREQQEKARVTGLALAMFTRVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LLFSLTWLMGLTAPLFSVVGREISGRDLILIAGGLFLLAKSTMEIHEKLEGDEGHSSTRA
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHH
AASFAGTIVQILLLDIVFSLDSIITAIGMANKLAVMVLAVIIAVGFMMFFSGNISAFVHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
HPTIKMLALSFLILIGVALIGDGLEMHIPKGYIYFAMAFSVGVEMLNMRMRAKGKPVKLH
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
EPYLEEGR
CCHHHCCC
>Mature Secondary Structure
MEWLTDPQAWIALATLTALEIVLGIDNIIFISILAGKLPREQQEKARVTGLALAMFTRVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LLFSLTWLMGLTAPLFSVVGREISGRDLILIAGGLFLLAKSTMEIHEKLEGDEGHSSTRA
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHH
AASFAGTIVQILLLDIVFSLDSIITAIGMANKLAVMVLAVIIAVGFMMFFSGNISAFVHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
HPTIKMLALSFLILIGVALIGDGLEMHIPKGYIYFAMAFSVGVEMLNMRMRAKGKPVKLH
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
EPYLEEGR
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]