| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222954
Identifier: 78222954
GI number: 78222954
Start: 1960993
End: 1963098
Strand: Direct
Name: 78222954
Synonym: Gmet_1745
Alternate gene names: NA
Gene position: 1960993-1963098 (Clockwise)
Preceding gene: 78222953
Following gene: 78222955
Centisome position: 49.06
GC content: 55.89
Gene sequence:
>2106_bases GTGATAAGGCGGGGATACATAGCAAAATTCGTGATGATGGTGGTGTGTCTTTGGGCTGCGACGGCCGTTGCGGCGGGAAG CGACGAGGCCGTTTCTGACAGCGGAACCACTGGTCAGCCACCCGCCGTCGAAGGTGTGACCGAAGAGCAAACTTTCGAGG AACCCCCCGAGCCCCCCCCCGAGCCCCCCCCCGAGCAACCCCTCCAGAACATGGAGATCGAGACCCATCGCATTGCGGAG GCTTCAGCCGGCTATCGCTTTGTTGGCACCCGCGACAGCGGCGTCAGGGCTGCTGAGTACGACTATCTTCATTCGAGCCT TGCGGGTGGAGCGCGCTTGACGCATCTTGGCAAGGACCTGAAGCTCGATGTGGACGGCGCCTTTCTCAATACCGAGGACT ACTTCGCCAACCTCATGGCCGATTACGGCGGGTACTACCGGCTGACCGCGCGGACCGAATCGCTCTTCCATAACCTGGAT CACGTGACGAGCGATTTGGGTATTTTCGATGATCCTGATCGTGCTGCACGTTACGGCGTCTCCACCCGGCGGGACTCTAT CCAGTTTCGCTACAAACTCCACGATTACCCTATCCATTTGAATCTGAGCCACTGGCTCATTGACCGGGAAGGTACGCAGC AGCGCCGCTATGCTGATTTTTCATTTGAAGATTACTATCACAATATCCTTATCCCGACTGAGCCTCCTATTGTTCCCGGG TCAAAACTCTACTTCAGGTCACGCAGTGTTAAGCAGGTGTCCTCCGAAGGGACGGCTGGCTTCGACGCCCATCTGGGGCC GGTCAACGTCGTCTATTCCTTCCTCTTCAGGGAGTTTGACAACGGGGAGTCAACGCCTATCCATGAATACAAAGCGCTGA CAGGCCCTTCCGAGCACAACGAAGACCCGGAAAGCCGCTACTATTCCCACACCGTAAAGCTTTACACGTCACCAGCAGGG GGGATTACCGGCGCAGCCTCCTATACGCATGGCAGGAGGGAGAACCTTTCTTCGCTGACGTCGGTTGTCGGAGCTGCTAA TGTCAAGGACACAATCCAGAATGCAGCGGGCGATTTCACTTACTCTCCCTGCGCGTGGTTCACGACTGCCATCAAATACC GACATCTCACTATCGATCGCGATACACCGTCAACGCTGTTTATTCCCTCTCTGTCGACCCAGACGGTAACACTCCGCCAG GGTATTGATACGCGAAAGGACACCATTTCGGCAAACCTGACCATCCGGCCCAATATGCTCATGAGCGTCAATGGCGAATA TCAGGGTATCTTTCAGCACCGCAGCAACACCGGAACGACAGATCCCAAGACGATGTGGAATCTTCCCGAGGATTCCGATA CCCATAAGGGAATCCTGACGGTACTGTTCCGCCCCATCAAGGGATTTCGGCTCAGGGGCCTTTACGAGTACACCACCACC AACAATCCCCTCTACGATTCCGACCCCGAACAGAAACATGAAGGGAGACTTCTCGCCACCTACACGAATTCCAGCCGATG GGGCGCGTCGGCAAACTATCGCATTGCCCGGGAATGGAACGATCGCATCTCCCGGACCACTCACCCTGAACTCCTCGATA GCCCCGAGACCTACGTTCTTCCTCGCGACCGGAATTTCGTGCATGCGTCCGTCGGCTTCTGGGTAAGCCCCATCGACCGG TTCACGGTAAGCGGCAATTTCGGATACTTGCGGACCAGGGCTGAACAGGCAGTCCTCTTTGCCACCGTTTTCAATGGTAT GAATGCCGCAACCGAATATGTCTCCCAGGGCGAAATCTATTCCGTAAACGCCGCATACCATGCCTCCGAGCAACTCGATC TCTCCCTTGCGTATCAGCTGGTCCATTCCCGCTCGACGTTCAAGCCTGGCAGGACTACCTCGGACGGTACTCCTACCGAC GGAATCAGTGAGCTTTCGCGGATAAAGACCGTGGAACATTCCCTGTCGGCCCGCGCTGACTACCGGCTAATGAAGCATTT TGGCTGTTCGTTGGATTATACTTACCGTGCATACGACAATCGGTTGTCTTCCGAAGGTGACGGAGCGGTTCATGAGGTTA CCGCCCTACTAAAGACTTCGTGGTAA
Upstream 100 bases:
>100_bases CTCACAGATCCATGGGACCGACATACCGGCGGGGGCCAATAATAATAGGGGCAACTTCCTCCGGTAGGCGGAATCCAGGC AACCGTAAGGAGTTTGTATT
Downstream 100 bases:
>100_bases TATTTTTATGTGGCAACGCACCTTGATACTGAAACGACTCATATATATTCTGCCGGTGTTGATTTTTGCAGTCTGCGCTA CACCTGCGTCCGCGGCGAGA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MIRRGYIAKFVMMVVCLWAATAVAAGSDEAVSDSGTTGQPPAVEGVTEEQTFEEPPEPPPEPPPEQPLQNMEIETHRIAE ASAGYRFVGTRDSGVRAAEYDYLHSSLAGGARLTHLGKDLKLDVDGAFLNTEDYFANLMADYGGYYRLTARTESLFHNLD HVTSDLGIFDDPDRAARYGVSTRRDSIQFRYKLHDYPIHLNLSHWLIDREGTQQRRYADFSFEDYYHNILIPTEPPIVPG SKLYFRSRSVKQVSSEGTAGFDAHLGPVNVVYSFLFREFDNGESTPIHEYKALTGPSEHNEDPESRYYSHTVKLYTSPAG GITGAASYTHGRRENLSSLTSVVGAANVKDTIQNAAGDFTYSPCAWFTTAIKYRHLTIDRDTPSTLFIPSLSTQTVTLRQ GIDTRKDTISANLTIRPNMLMSVNGEYQGIFQHRSNTGTTDPKTMWNLPEDSDTHKGILTVLFRPIKGFRLRGLYEYTTT NNPLYDSDPEQKHEGRLLATYTNSSRWGASANYRIAREWNDRISRTTHPELLDSPETYVLPRDRNFVHASVGFWVSPIDR FTVSGNFGYLRTRAEQAVLFATVFNGMNAATEYVSQGEIYSVNAAYHASEQLDLSLAYQLVHSRSTFKPGRTTSDGTPTD GISELSRIKTVEHSLSARADYRLMKHFGCSLDYTYRAYDNRLSSEGDGAVHEVTALLKTSW
Sequences:
>Translated_701_residues MIRRGYIAKFVMMVVCLWAATAVAAGSDEAVSDSGTTGQPPAVEGVTEEQTFEEPPEPPPEPPPEQPLQNMEIETHRIAE ASAGYRFVGTRDSGVRAAEYDYLHSSLAGGARLTHLGKDLKLDVDGAFLNTEDYFANLMADYGGYYRLTARTESLFHNLD HVTSDLGIFDDPDRAARYGVSTRRDSIQFRYKLHDYPIHLNLSHWLIDREGTQQRRYADFSFEDYYHNILIPTEPPIVPG SKLYFRSRSVKQVSSEGTAGFDAHLGPVNVVYSFLFREFDNGESTPIHEYKALTGPSEHNEDPESRYYSHTVKLYTSPAG GITGAASYTHGRRENLSSLTSVVGAANVKDTIQNAAGDFTYSPCAWFTTAIKYRHLTIDRDTPSTLFIPSLSTQTVTLRQ GIDTRKDTISANLTIRPNMLMSVNGEYQGIFQHRSNTGTTDPKTMWNLPEDSDTHKGILTVLFRPIKGFRLRGLYEYTTT NNPLYDSDPEQKHEGRLLATYTNSSRWGASANYRIAREWNDRISRTTHPELLDSPETYVLPRDRNFVHASVGFWVSPIDR FTVSGNFGYLRTRAEQAVLFATVFNGMNAATEYVSQGEIYSVNAAYHASEQLDLSLAYQLVHSRSTFKPGRTTSDGTPTD GISELSRIKTVEHSLSARADYRLMKHFGCSLDYTYRAYDNRLSSEGDGAVHEVTALLKTSW >Mature_701_residues MIRRGYIAKFVMMVVCLWAATAVAAGSDEAVSDSGTTGQPPAVEGVTEEQTFEEPPEPPPEPPPEQPLQNMEIETHRIAE ASAGYRFVGTRDSGVRAAEYDYLHSSLAGGARLTHLGKDLKLDVDGAFLNTEDYFANLMADYGGYYRLTARTESLFHNLD HVTSDLGIFDDPDRAARYGVSTRRDSIQFRYKLHDYPIHLNLSHWLIDREGTQQRRYADFSFEDYYHNILIPTEPPIVPG SKLYFRSRSVKQVSSEGTAGFDAHLGPVNVVYSFLFREFDNGESTPIHEYKALTGPSEHNEDPESRYYSHTVKLYTSPAG GITGAASYTHGRRENLSSLTSVVGAANVKDTIQNAAGDFTYSPCAWFTTAIKYRHLTIDRDTPSTLFIPSLSTQTVTLRQ GIDTRKDTISANLTIRPNMLMSVNGEYQGIFQHRSNTGTTDPKTMWNLPEDSDTHKGILTVLFRPIKGFRLRGLYEYTTT NNPLYDSDPEQKHEGRLLATYTNSSRWGASANYRIAREWNDRISRTTHPELLDSPETYVLPRDRNFVHASVGFWVSPIDR FTVSGNFGYLRTRAEQAVLFATVFNGMNAATEYVSQGEIYSVNAAYHASEQLDLSLAYQLVHSRSTFKPGRTTSDGTPTD GISELSRIKTVEHSLSARADYRLMKHFGCSLDYTYRAYDNRLSSEGDGAVHEVTALLKTSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78630; Mature: 78630
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRGYIAKFVMMVVCLWAATAVAAGSDEAVSDSGTTGQPPAVEGVTEEQTFEEPPEPPP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC EPPPEQPLQNMEIETHRIAEASAGYRFVGTRDSGVRAAEYDYLHSSLAGGARLTHLGKDL CCCCCCCHHCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCE KLDVDGAFLNTEDYFANLMADYGGYYRLTARTESLFHNLDHVTSDLGIFDDPDRAARYGV EEEECCEEECCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC STRRDSIQFRYKLHDYPIHLNLSHWLIDREGTQQRRYADFSFEDYYHNILIPTEPPIVPG CCCCCCEEEEEEEECEEEEEEHHHEEEECCCCCHHHCCCCCHHHHHCEEEECCCCCCCCC SKLYFRSRSVKQVSSEGTAGFDAHLGPVNVVYSFLFREFDNGESTPIHEYKALTGPSEHN CCEEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC EDPESRYYSHTVKLYTSPAGGITGAASYTHGRRENLSSLTSVVGAANVKDTIQNAAGDFT CCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC YSPCAWFTTAIKYRHLTIDRDTPSTLFIPSLSTQTVTLRQGIDTRKDTISANLTIRPNML CCCHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEHHCCCCCCCCEEEEEEEECCCEE MSVNGEYQGIFQHRSNTGTTDPKTMWNLPEDSDTHKGILTVLFRPIKGFRLRGLYEYTTT EEECCCEEEEEEECCCCCCCCCHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECC NNPLYDSDPEQKHEGRLLATYTNSSRWGASANYRIAREWNDRISRTTHPELLDSPETYVL CCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCEEEECHHHHHCCCCCCHHHCCCCCEEE PRDRNFVHASVGFWVSPIDRFTVSGNFGYLRTRAEQAVLFATVFNGMNAATEYVSQGEIY ECCCCEEEEECCCEECCCEEEEECCCCCEEEEHHHHHEEEEHHHCCCHHHHHHHCCCCEE SVNAAYHASEQLDLSLAYQLVHSRSTFKPGRTTSDGTPTDGISELSRIKTVEHSLSARAD EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YRLMKHFGCSLDYTYRAYDNRLSSEGDGAVHEVTALLKTSW HHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIRRGYIAKFVMMVVCLWAATAVAAGSDEAVSDSGTTGQPPAVEGVTEEQTFEEPPEPPP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC EPPPEQPLQNMEIETHRIAEASAGYRFVGTRDSGVRAAEYDYLHSSLAGGARLTHLGKDL CCCCCCCHHCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCE KLDVDGAFLNTEDYFANLMADYGGYYRLTARTESLFHNLDHVTSDLGIFDDPDRAARYGV EEEECCEEECCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC STRRDSIQFRYKLHDYPIHLNLSHWLIDREGTQQRRYADFSFEDYYHNILIPTEPPIVPG CCCCCCEEEEEEEECEEEEEEHHHEEEECCCCCHHHCCCCCHHHHHCEEEECCCCCCCCC SKLYFRSRSVKQVSSEGTAGFDAHLGPVNVVYSFLFREFDNGESTPIHEYKALTGPSEHN CCEEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC EDPESRYYSHTVKLYTSPAGGITGAASYTHGRRENLSSLTSVVGAANVKDTIQNAAGDFT CCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC YSPCAWFTTAIKYRHLTIDRDTPSTLFIPSLSTQTVTLRQGIDTRKDTISANLTIRPNML CCCHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEHHCCCCCCCCEEEEEEEECCCEE MSVNGEYQGIFQHRSNTGTTDPKTMWNLPEDSDTHKGILTVLFRPIKGFRLRGLYEYTTT EEECCCEEEEEEECCCCCCCCCHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECC NNPLYDSDPEQKHEGRLLATYTNSSRWGASANYRIAREWNDRISRTTHPELLDSPETYVL CCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCEEEECHHHHHCCCCCCHHHCCCCCEEE PRDRNFVHASVGFWVSPIDRFTVSGNFGYLRTRAEQAVLFATVFNGMNAATEYVSQGEIY ECCCCEEEEECCCEECCCEEEEECCCCCEEEEHHHHHEEEEHHHCCCHHHHHHHCCCCEE SVNAAYHASEQLDLSLAYQLVHSRSTFKPGRTTSDGTPTDGISELSRIKTVEHSLSARAD EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YRLMKHFGCSLDYTYRAYDNRLSSEGDGAVHEVTALLKTSW HHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA