| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222953
Identifier: 78222953
GI number: 78222953
Start: 1959946
End: 1960959
Strand: Direct
Name: 78222953
Synonym: Gmet_1744
Alternate gene names: NA
Gene position: 1959946-1960959 (Clockwise)
Preceding gene: 78222952
Following gene: 78222954
Centisome position: 49.03
GC content: 57.99
Gene sequence:
>1014_bases ATGAATATGCTCAACACAATTAGCGGTATTTTCACTGCTGCCGTCGTGACGACGGGCGCCCTTCTGCTCTCATCCTGCGC TGAGCTCAAGCAGGACCGTCCCCTGCTGCCGGTCCGCGAATACGAGCGGATGATCGTGGGGCGCCTCGACGCCGAGTATG TGGGAACCGACAACTGCGTCTCCAAATGCCACAAGCACGAGAAGATTGCCGATGATTTCAGGCACAGTCTGCACGGCGAG CAGATAAAGCCGGAGACCGGCCTTCCGCTCGTCAACTGCGAGTCGTGCCATGGCCCTGGGAGTCTTGCCATAGAAAAACT CGGCGATAACGTGGAAGAAAATGACGAAAAAAAGGTGAAGTGCGACACAAGCACGTTCCTTGACATCCACAATCTCCCGA CACCAGCCCAGTCACTCATCTGCCTCAAATGCCACGCGGCCGCCTCGTCGCCGACCCTGGCCCACTGGACCGGAAGCGTT CATGCCCTGAACGACGTTGGCTGCTTTGACTGCCACAAACTACACCGAAGCCCTCGCCAGAAGGTGACCAGGGAGGAGAC CGCAGAGCTCTGTTATGGCTGCCATACGGAGATCAAAGCCGAGAACAGCCTCTTTTCCCACCATCCGATCAGGGAGAAGA AGATTGCCTGCACTGACTGCCATGATCCCCATGGCTCCGTGCAACCCCATCTCCTCAAGGGAAGCACCCCCAAGGAGCTC TGTACCCGTTGCCACATGGAGAAGCAGGGGCCCTTCGCCTTCGAGCACGGCGATGTGACCGAGAATTGCGCCACCTGCCA CTCACCACACGGTTCGGTCAACAACCATCTCCTCAATGCCGCCATGCCGTTTCTCTGCCTCCAGTGCCACGGGGGGCATG TGGTTACGCTGATGCCGAATGATCCTGTAGACAAGCGTCTGTTCAACAACCGCTGCACCGACTGTCACTCACAGATCCAT GGGACCGACATACCGGCGGGGGCCAATAATAATAGGGGCAACTTCCTCCGGTAG
Upstream 100 bases:
>100_bases AACCCTATAATCAAGGGATTCATCTATACGACTACCAAAGGGATCAAGGGGTGAGCGCCGCTTTGCTGGTTTCCGGCGTA CCCGGTCAGGGCAGGAATCC
Downstream 100 bases:
>100_bases GCGGAATCCAGGCAACCGTAAGGAGTTTGTATTGTGATAAGGCGGGGATACATAGCAAAATTCGTGATGATGGTGGTGTG TCTTTGGGCTGCGACGGCCG
Product: cytochrome c family protein
Products: NA
Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Doubled CXXCH Domain-Containing Protein; Cytochrome C; Multiheme Cytochrome; Multiheme C-Type Cytochrome; Cytochrome; Lipoprotein Cytochrome C; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C-Type Protein NrfB
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MNMLNTISGIFTAAVVTTGALLLSSCAELKQDRPLLPVREYERMIVGRLDAEYVGTDNCVSKCHKHEKIADDFRHSLHGE QIKPETGLPLVNCESCHGPGSLAIEKLGDNVEENDEKKVKCDTSTFLDIHNLPTPAQSLICLKCHAAASSPTLAHWTGSV HALNDVGCFDCHKLHRSPRQKVTREETAELCYGCHTEIKAENSLFSHHPIREKKIACTDCHDPHGSVQPHLLKGSTPKEL CTRCHMEKQGPFAFEHGDVTENCATCHSPHGSVNNHLLNAAMPFLCLQCHGGHVVTLMPNDPVDKRLFNNRCTDCHSQIH GTDIPAGANNNRGNFLR
Sequences:
>Translated_337_residues MNMLNTISGIFTAAVVTTGALLLSSCAELKQDRPLLPVREYERMIVGRLDAEYVGTDNCVSKCHKHEKIADDFRHSLHGE QIKPETGLPLVNCESCHGPGSLAIEKLGDNVEENDEKKVKCDTSTFLDIHNLPTPAQSLICLKCHAAASSPTLAHWTGSV HALNDVGCFDCHKLHRSPRQKVTREETAELCYGCHTEIKAENSLFSHHPIREKKIACTDCHDPHGSVQPHLLKGSTPKEL CTRCHMEKQGPFAFEHGDVTENCATCHSPHGSVNNHLLNAAMPFLCLQCHGGHVVTLMPNDPVDKRLFNNRCTDCHSQIH GTDIPAGANNNRGNFLR >Mature_337_residues MNMLNTISGIFTAAVVTTGALLLSSCAELKQDRPLLPVREYERMIVGRLDAEYVGTDNCVSKCHKHEKIADDFRHSLHGE QIKPETGLPLVNCESCHGPGSLAIEKLGDNVEENDEKKVKCDTSTFLDIHNLPTPAQSLICLKCHAAASSPTLAHWTGSV HALNDVGCFDCHKLHRSPRQKVTREETAELCYGCHTEIKAENSLFSHHPIREKKIACTDCHDPHGSVQPHLLKGSTPKEL CTRCHMEKQGPFAFEHGDVTENCATCHSPHGSVNNHLLNAAMPFLCLQCHGGHVVTLMPNDPVDKRLFNNRCTDCHSQIH GTDIPAGANNNRGNFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37135; Mature: 37135
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMLNTISGIFTAAVVTTGALLLSSCAELKQDRPLLPVREYERMIVGRLDAEYVGTDNCV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHH SKCHKHEKIADDFRHSLHGEQIKPETGLPLVNCESCHGPGSLAIEKLGDNVEENDEKKVK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEE CDTSTFLDIHNLPTPAQSLICLKCHAAASSPTLAHWTGSVHALNDVGCFDCHKLHRSPRQ ECCHHEEEECCCCCHHHHEEEEEEECCCCCCCEEEECCCEEECCCCCHHHHHHHHCCHHH KVTREETAELCYGCHTEIKAENSLFSHHPIREKKIACTDCHDPHGSVQPHLLKGSTPKEL HHHHHHHHHHHHCCCCHHCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCEEECCCCHHHH CTRCHMEKQGPFAFEHGDVTENCATCHSPHGSVNNHLLNAAMPFLCLQCHGGHVVTLMPN HHHHCCCCCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECCC DPVDKRLFNNRCTDCHSQIHGTDIPAGANNNRGNFLR CCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNMLNTISGIFTAAVVTTGALLLSSCAELKQDRPLLPVREYERMIVGRLDAEYVGTDNCV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHH SKCHKHEKIADDFRHSLHGEQIKPETGLPLVNCESCHGPGSLAIEKLGDNVEENDEKKVK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEE CDTSTFLDIHNLPTPAQSLICLKCHAAASSPTLAHWTGSVHALNDVGCFDCHKLHRSPRQ ECCHHEEEECCCCCHHHHEEEEEEECCCCCCCEEEECCCEEECCCCCHHHHHHHHCCHHH KVTREETAELCYGCHTEIKAENSLFSHHPIREKKIACTDCHDPHGSVQPHLLKGSTPKEL HHHHHHHHHHHHCCCCHHCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCEEECCCCHHHH CTRCHMEKQGPFAFEHGDVTENCATCHSPHGSVNNHLLNAAMPFLCLQCHGGHVVTLMPN HHHHCCCCCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECCC DPVDKRLFNNRCTDCHSQIHGTDIPAGANNNRGNFLR CCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA