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The map label for this gene is 78222950

Identifier: 78222950

GI number: 78222950

Start: 1957400

End: 1958353

Strand: Direct

Name: 78222950

Synonym: Gmet_1741

Alternate gene names: NA

Gene position: 1957400-1958353 (Clockwise)

Preceding gene: 78222949

Following gene: 78222951

Centisome position: 48.97

GC content: 58.28

Gene sequence:

>954_bases
ATGCACGCGCAAACGAAAGACCTCACCCCCATCAAGGGAATTCGCTACTATTACCCACCCGATGATGCCGTTCTGGTTTT
CAAGGACGAGAAGGAGCGGATACATTACGGCGGCATGCCGGTGCCGCTGCTGGAGGATGACTTTGCCAGGCTGGACGGAG
AGCCATCCTACGATGAGGTTGGCCGTGGGGTTTACCAGGCCCTTCGGAGCAATCCCGACTGCATCCTCTGCGACAAATAT
GCGGCACTCCTCAGGGACGCCTATCCCCACTACCTGGCCGAGTTGGCCAGCAATGCCATCATGATCGACAGCAAGGACGT
GGAAGTTCCCTATCTCGACCGCAAGATCGCCTGCCTGAAGGTTCTTGCCCTTCTGGAGCCGCAAAATCCGGCTCTCCCCC
TTGAGATCGGCAGGGTCTTTCTTGATCGGGGGATGCGGCTTTCGGCCCTCCATCTTTCCACCGTCAGCATCTATCGGGCC
GAGCACTTCCTCAACCGGGCCCATACCCTCGCACCGGACGACCGCAACATCAATCGTTACCTGGGAGAGGCGTACTACCT
TCTCGGCAAGTACGACGAGGCGGTCGGTTTCTGGCGAAAGGCCACGACAACTGACGAGCCGGAAGCGGAGCGGCTGCGGG
AGCGCATTGAACGGATTAGCGCCGGGAATGTTCCCCTGATTCCCCCTGTTGATTATCTGGAAGCAATCGGAGCGGCCTTT
GCATGTAACCAGACCGGAGAGTACGAAGAGTCTATTGCCATTCTTCAGGATATCCTGATGGATCCGGTATTTAGCGAGGA
GTTTCCCATCCCTGAGATTCACTGCGTCATCGGTAAGGGATTCACGGCCCTCGACATGCCGAAGTACGCCGAGGCGGAAT
TTCGCCAGGCCCTTGTGATGGATCCGGCTCACGAGGAGGCCCGAGCTCTCCTTGCCACGATCGCTGCTGCGTAG

Upstream 100 bases:

>100_bases
GACGAACCCTGGGACGAGGTGCGGATCTACAAGACGGTTGGAGAACATGCTGGAATCGACACCTTTCCCGACAGAAACAA
TGAAGGAGGACACCCCTGAC

Downstream 100 bases:

>100_bases
TTAGGGGTGTCCATGTTCGGCTTCAGCATTGCAGACTGGATTTTCATTGGCCTGGTGATGGCAACGATCTTTACCTGTGT
TGCCATCAGCGACATGCGGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain Protein

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MHAQTKDLTPIKGIRYYYPPDDAVLVFKDEKERIHYGGMPVPLLEDDFARLDGEPSYDEVGRGVYQALRSNPDCILCDKY
AALLRDAYPHYLAELASNAIMIDSKDVEVPYLDRKIACLKVLALLEPQNPALPLEIGRVFLDRGMRLSALHLSTVSIYRA
EHFLNRAHTLAPDDRNINRYLGEAYYLLGKYDEAVGFWRKATTTDEPEAERLRERIERISAGNVPLIPPVDYLEAIGAAF
ACNQTGEYEESIAILQDILMDPVFSEEFPIPEIHCVIGKGFTALDMPKYAEAEFRQALVMDPAHEEARALLATIAAA

Sequences:

>Translated_317_residues
MHAQTKDLTPIKGIRYYYPPDDAVLVFKDEKERIHYGGMPVPLLEDDFARLDGEPSYDEVGRGVYQALRSNPDCILCDKY
AALLRDAYPHYLAELASNAIMIDSKDVEVPYLDRKIACLKVLALLEPQNPALPLEIGRVFLDRGMRLSALHLSTVSIYRA
EHFLNRAHTLAPDDRNINRYLGEAYYLLGKYDEAVGFWRKATTTDEPEAERLRERIERISAGNVPLIPPVDYLEAIGAAF
ACNQTGEYEESIAILQDILMDPVFSEEFPIPEIHCVIGKGFTALDMPKYAEAEFRQALVMDPAHEEARALLATIAAA
>Mature_317_residues
MHAQTKDLTPIKGIRYYYPPDDAVLVFKDEKERIHYGGMPVPLLEDDFARLDGEPSYDEVGRGVYQALRSNPDCILCDKY
AALLRDAYPHYLAELASNAIMIDSKDVEVPYLDRKIACLKVLALLEPQNPALPLEIGRVFLDRGMRLSALHLSTVSIYRA
EHFLNRAHTLAPDDRNINRYLGEAYYLLGKYDEAVGFWRKATTTDEPEAERLRERIERISAGNVPLIPPVDYLEAIGAAF
ACNQTGEYEESIAILQDILMDPVFSEEFPIPEIHCVIGKGFTALDMPKYAEAEFRQALVMDPAHEEARALLATIAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35690; Mature: 35690

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAQTKDLTPIKGIRYYYPPDDAVLVFKDEKERIHYGGMPVPLLEDDFARLDGEPSYDEV
CCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCHHHHCCCCCCHHHH
GRGVYQALRSNPDCILCDKYAALLRDAYPHYLAELASNAIMIDSKDVEVPYLDRKIACLK
HHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHH
VLALLEPQNPALPLEIGRVFLDRGMRLSALHLSTVSIYRAEHFLNRAHTLAPDDRNINRY
HHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LGEAYYLLGKYDEAVGFWRKATTTDEPEAERLRERIERISAGNVPLIPPVDYLEAIGAAF
HHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ACNQTGEYEESIAILQDILMDPVFSEEFPIPEIHCVIGKGFTALDMPKYAEAEFRQALVM
HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC
DPAHEEARALLATIAAA
CCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MHAQTKDLTPIKGIRYYYPPDDAVLVFKDEKERIHYGGMPVPLLEDDFARLDGEPSYDEV
CCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCHHHHCCCCCCHHHH
GRGVYQALRSNPDCILCDKYAALLRDAYPHYLAELASNAIMIDSKDVEVPYLDRKIACLK
HHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHH
VLALLEPQNPALPLEIGRVFLDRGMRLSALHLSTVSIYRAEHFLNRAHTLAPDDRNINRY
HHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LGEAYYLLGKYDEAVGFWRKATTTDEPEAERLRERIERISAGNVPLIPPVDYLEAIGAAF
HHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ACNQTGEYEESIAILQDILMDPVFSEEFPIPEIHCVIGKGFTALDMPKYAEAEFRQALVM
HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC
DPAHEEARALLATIAAA
CCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA