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The map label for this gene is yclJ [H]

Identifier: 78222946

GI number: 78222946

Start: 1952872

End: 1953705

Strand: Reverse

Name: yclJ [H]

Synonym: Gmet_1737

Alternate gene names: 78222946

Gene position: 1953705-1952872 (Counterclockwise)

Preceding gene: 78222947

Following gene: 78222941

Centisome position: 48.87

GC content: 57.31

Gene sequence:

>834_bases
ATGGTACAGAAAAAGCAACTGGGCGACCTGCTGGTGGAGGCGGGAATCATAACCGTCAAGACCATTGAGCGGGCCCTGGA
GCGCCAGAAGGGGAGCGGAAAACGACTTGGTCAGGTTCTCGAGGAGATGGGGGTCATCACCGGTGAGGAACTGATCGATG
CCCTGTCGAAACAACTCGGCATCAAAACGGTGAAGGGGTTTGTCGATTACGCATTTCCGCCGGAGCTGCTCTCCCTCGTC
CCCCAGGACATGGCGGTACAGCGGCTTGTTTTTCCCCTCAAACTGAAAGAGAACATGCTGGCCCTGGCCCTGAACGATCC
CTTTGATCAGGACACCGTCGATTTCCTGGCCAAGAAGCACCGGCTCAAAGTGGTGCCGATCCTTGCCACGCGGCAGGAGC
TTTTGGCCGCCATAGAGAAGCACTACCTCCATGGCAAGATGAAGGACGTGCAACGACAGAAAGTCCTCGTGGTGGAAGAT
ACCCTCCCCGTGGCTACCGTCATTCAGGTGGCGCTTCTGAAAGAAGGGTACGACGTTCTGGTGACCCATGACGGGGTTGA
CGGACTCAAGTCGGCCGTGACCGAAAAACCCGACATGATTTTAACCGACGCAACCATGCCGCGCATGGATGGCTTCGGCC
TCCTGCGTGCTCTGCGCACAAACCCGGCCACCGCCGACATTCCCGTCATCCTCATCACCTCCAAGGCCACCGGCGAAGAT
GAACAACGGGCGTTGGAGGCCGGTTTTCTGGACTTCATCGCCAAACCGGTCCAACCAATCAGAATTGTTACTCGGGTCAA
GCGGGCCTTCGAGCTGACGAAGCGTTACAAGTAA

Upstream 100 bases:

>100_bases
AAGTGTCCGATATAATGAGTGAAGTTTTCCGTCAGTACGCCACTATGGCAGGAAATTCGCGATCCAGCTCTCAAATCTCC
GGAAGTGAAGGGAATTGCTG

Downstream 100 bases:

>100_bases
ACCACCCTAACCGGAAAAAGGGGCGACACGAAATCATATCGTGCCGCCCCTTTGATTTTCGCCCATGACCTGTGAGGCTT
GCTGCGTTACCCGATAAAAG

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MVQKKQLGDLLVEAGIITVKTIERALERQKGSGKRLGQVLEEMGVITGEELIDALSKQLGIKTVKGFVDYAFPPELLSLV
PQDMAVQRLVFPLKLKENMLALALNDPFDQDTVDFLAKKHRLKVVPILATRQELLAAIEKHYLHGKMKDVQRQKVLVVED
TLPVATVIQVALLKEGYDVLVTHDGVDGLKSAVTEKPDMILTDATMPRMDGFGLLRALRTNPATADIPVILITSKATGED
EQRALEAGFLDFIAKPVQPIRIVTRVKRAFELTKRYK

Sequences:

>Translated_277_residues
MVQKKQLGDLLVEAGIITVKTIERALERQKGSGKRLGQVLEEMGVITGEELIDALSKQLGIKTVKGFVDYAFPPELLSLV
PQDMAVQRLVFPLKLKENMLALALNDPFDQDTVDFLAKKHRLKVVPILATRQELLAAIEKHYLHGKMKDVQRQKVLVVED
TLPVATVIQVALLKEGYDVLVTHDGVDGLKSAVTEKPDMILTDATMPRMDGFGLLRALRTNPATADIPVILITSKATGED
EQRALEAGFLDFIAKPVQPIRIVTRVKRAFELTKRYK
>Mature_277_residues
MVQKKQLGDLLVEAGIITVKTIERALERQKGSGKRLGQVLEEMGVITGEELIDALSKQLGIKTVKGFVDYAFPPELLSLV
PQDMAVQRLVFPLKLKENMLALALNDPFDQDTVDFLAKKHRLKVVPILATRQELLAAIEKHYLHGKMKDVQRQKVLVVED
TLPVATVIQVALLKEGYDVLVTHDGVDGLKSAVTEKPDMILTDATMPRMDGFGLLRALRTNPATADIPVILITSKATGED
EQRALEAGFLDFIAKPVQPIRIVTRVKRAFELTKRYK

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=115, Percent_Identity=32.1739130434783, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790860, Length=129, Percent_Identity=31.7829457364341, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082012, Length=114, Percent_Identity=32.4561403508772, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790437, Length=104, Percent_Identity=33.6538461538462, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI145693157, Length=103, Percent_Identity=35.9223300970874, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788191, Length=119, Percent_Identity=29.4117647058824, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788550, Length=120, Percent_Identity=30, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 30797; Mature: 30797

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQKKQLGDLLVEAGIITVKTIERALERQKGSGKRLGQVLEEMGVITGEELIDALSKQLG
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
IKTVKGFVDYAFPPELLSLVPQDMAVQRLVFPLKLKENMLALALNDPFDQDTVDFLAKKH
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHC
RLKVVPILATRQELLAAIEKHYLHGKMKDVQRQKVLVVEDTLPVATVIQVALLKEGYDVL
CEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCEEE
VTHDGVDGLKSAVTEKPDMILTDATMPRMDGFGLLRALRTNPATADIPVILITSKATGED
EEECCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCH
EQRALEAGFLDFIAKPVQPIRIVTRVKRAFELTKRYK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQKKQLGDLLVEAGIITVKTIERALERQKGSGKRLGQVLEEMGVITGEELIDALSKQLG
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
IKTVKGFVDYAFPPELLSLVPQDMAVQRLVFPLKLKENMLALALNDPFDQDTVDFLAKKH
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHC
RLKVVPILATRQELLAAIEKHYLHGKMKDVQRQKVLVVEDTLPVATVIQVALLKEGYDVL
CEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCEEE
VTHDGVDGLKSAVTEKPDMILTDATMPRMDGFGLLRALRTNPATADIPVILITSKATGED
EEECCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCH
EQRALEAGFLDFIAKPVQPIRIVTRVKRAFELTKRYK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]