Click here to switch to the map view.

The map label for this gene is 78222930

Identifier: 78222930

GI number: 78222930

Start: 1934971

End: 1936014

Strand: Reverse

Name: 78222930

Synonym: Gmet_1721

Alternate gene names: NA

Gene position: 1936014-1934971 (Counterclockwise)

Preceding gene: 78222931

Following gene: 78222929

Centisome position: 48.43

GC content: 64.66

Gene sequence:

>1044_bases
ATGACTACCCCAACGGAAACATCGCTTTACCGGACCTTGTCGCTGGGGAGCGAACCGAAGCATCGTCGGCGTTTCATGGT
GGTCGACGAGGAGATACCCGGCAATTTCCGCTTCGGCCTCCTGCTGGAAGAGTTGGATATCCTCGCCGAGCAGACGGCCA
TTGCCTATGTCCGGCGCTTTCATCCCGAGGGGCGGGTCGTTACGGCGGCCATCGACAACATCCTGGTGCGCCACGTGGTG
GACGTCAACCGCGACATCGTCATGCATGCCCGGATCAACCACGTGGGGCGCTCCTCGCTGGAAGTGGGGATCCGGGTGGA
GCATGCCGGCGACCCGGCCACCCACATCGCCTCCTGCTATTTCACCATGGTTGCCCGTGGCGGAGAAGGGGCCGGCGAGA
GCATTCCCCTTCCCCCTCTTGAGTACGGCGACGAGCTGGAGCAACAGCGGGCCGCCAAGGCCATTGCCGACCGGGAGGAG
TACCGCCGGCAGCAGGCGTCTCTTCTGGAGCCTCCCAGCCGGGAGGAATACGAGATGCTCGACCGGCTGCATCGGGACCA
GGAAGAGCCCGGCTTCACCGGCCACCCAGCCGGCCGCCTGGTGGCCGACGCCTGGGAACGGATGTACCCGGAGCAGGAGT
ACGTCCCCCAGCGGATCTTCGGCGGCTACCTGATCCGCCGCGCCTACGAGCTGTCGGCCATCTGCTCCGAGCAGGTGGCG
CCTGACCGCTCCATCATCGCGGCGGTAAACCGGATCAACTTCTTTCACCCGGTGAGGATCGGAGACAAGCTCCACTTCAC
CAGCCGGGTGGTTTACACCAACGAGAGCTTTGTCTGTGTCGAGGCGAGCATCGAACGGATCAGCCGCGACCGGACCGCCA
GCGCCCTCTCCAACTCGTGCCTCTTTACCTTTGTGAACGTGGACCGGGAGCTGAACCACCGTCCGGTGCCCCCCATTTAT
CCGGCCACCTACCGGGAGGATGCCCGCTACCTGGAGGCATACCGGAGCTACCAGGCCATCGCCGGCCACTACCGGATGCT
CTGA

Upstream 100 bases:

>100_bases
AAGGGCCGCCTCTCATGCATCATGCGATTCCGCTTTACGATTAAGCGATACGGGGTAAACTGGATGCAGCAATTACTTCA
TTAAATACTGGAGGCATTTC

Downstream 100 bases:

>100_bases
ATACTAGCTATTCTGAAGGAGATAACTACCGATGATGACAAAAATGGAATCGGAACAGCGGATCATCCGACTGCAGACGG
AACTGCGCGCCAAGGGGATC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase Superfamily; Acyl-CoA Hydrolase; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Acyl-CoA Thioester Hydrolase

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTTPTETSLYRTLSLGSEPKHRRRFMVVDEEIPGNFRFGLLLEELDILAEQTAIAYVRRFHPEGRVVTAAIDNILVRHVV
DVNRDIVMHARINHVGRSSLEVGIRVEHAGDPATHIASCYFTMVARGGEGAGESIPLPPLEYGDELEQQRAAKAIADREE
YRRQQASLLEPPSREEYEMLDRLHRDQEEPGFTGHPAGRLVADAWERMYPEQEYVPQRIFGGYLIRRAYELSAICSEQVA
PDRSIIAAVNRINFFHPVRIGDKLHFTSRVVYTNESFVCVEASIERISRDRTASALSNSCLFTFVNVDRELNHRPVPPIY
PATYREDARYLEAYRSYQAIAGHYRML

Sequences:

>Translated_347_residues
MTTPTETSLYRTLSLGSEPKHRRRFMVVDEEIPGNFRFGLLLEELDILAEQTAIAYVRRFHPEGRVVTAAIDNILVRHVV
DVNRDIVMHARINHVGRSSLEVGIRVEHAGDPATHIASCYFTMVARGGEGAGESIPLPPLEYGDELEQQRAAKAIADREE
YRRQQASLLEPPSREEYEMLDRLHRDQEEPGFTGHPAGRLVADAWERMYPEQEYVPQRIFGGYLIRRAYELSAICSEQVA
PDRSIIAAVNRINFFHPVRIGDKLHFTSRVVYTNESFVCVEASIERISRDRTASALSNSCLFTFVNVDRELNHRPVPPIY
PATYREDARYLEAYRSYQAIAGHYRML
>Mature_346_residues
TTPTETSLYRTLSLGSEPKHRRRFMVVDEEIPGNFRFGLLLEELDILAEQTAIAYVRRFHPEGRVVTAAIDNILVRHVVD
VNRDIVMHARINHVGRSSLEVGIRVEHAGDPATHIASCYFTMVARGGEGAGESIPLPPLEYGDELEQQRAAKAIADREEY
RRQQASLLEPPSREEYEMLDRLHRDQEEPGFTGHPAGRLVADAWERMYPEQEYVPQRIFGGYLIRRAYELSAICSEQVAP
DRSIIAAVNRINFFHPVRIGDKLHFTSRVVYTNESFVCVEASIERISRDRTASALSNSCLFTFVNVDRELNHRPVPPIYP
ATYREDARYLEAYRSYQAIAGHYRML

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI81295404, Length=349, Percent_Identity=28.3667621776504, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI81295407, Length=349, Percent_Identity=28.3667621776504, Blast_Score=124, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI32564577, Length=269, Percent_Identity=25.2788104089219, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32564579, Length=268, Percent_Identity=25, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17561564, Length=340, Percent_Identity=25.2941176470588, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21357159, Length=324, Percent_Identity=27.7777777777778, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28571955, Length=330, Percent_Identity=26.6666666666667, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24582281, Length=330, Percent_Identity=23.9393939393939, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161079406, Length=325, Percent_Identity=23.6923076923077, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39703; Mature: 39572

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPTETSLYRTLSLGSEPKHRRRFMVVDEEIPGNFRFGLLLEELDILAEQTAIAYVRRF
CCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
HPEGRVVTAAIDNILVRHVVDVNRDIVMHARINHVGRSSLEVGIRVEHAGDPATHIASCY
CCCCCEEHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCEEEEEEEECCCCCHHHHHHHH
FTMVARGGEGAGESIPLPPLEYGDELEQQRAAKAIADREEYRRQQASLLEPPSREEYEML
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DRLHRDQEEPGFTGHPAGRLVADAWERMYPEQEYVPQRIFGGYLIRRAYELSAICSEQVA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDRSIIAAVNRINFFHPVRIGDKLHFTSRVVYTNESFVCVEASIERISRDRTASALSNSC
CCHHHHHHHHHHCCCCCEECCCEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCE
LFTFVNVDRELNHRPVPPIYPATYREDARYLEAYRSYQAIAGHYRML
EEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTPTETSLYRTLSLGSEPKHRRRFMVVDEEIPGNFRFGLLLEELDILAEQTAIAYVRRF
CCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
HPEGRVVTAAIDNILVRHVVDVNRDIVMHARINHVGRSSLEVGIRVEHAGDPATHIASCY
CCCCCEEHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCEEEEEEEECCCCCHHHHHHHH
FTMVARGGEGAGESIPLPPLEYGDELEQQRAAKAIADREEYRRQQASLLEPPSREEYEML
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DRLHRDQEEPGFTGHPAGRLVADAWERMYPEQEYVPQRIFGGYLIRRAYELSAICSEQVA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDRSIIAAVNRINFFHPVRIGDKLHFTSRVVYTNESFVCVEASIERISRDRTASALSNSC
CCHHHHHHHHHHCCCCCEECCCEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCE
LFTFVNVDRELNHRPVPPIYPATYREDARYLEAYRSYQAIAGHYRML
EEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA