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The map label for this gene is 78222914

Identifier: 78222914

GI number: 78222914

Start: 1913656

End: 1915074

Strand: Reverse

Name: 78222914

Synonym: Gmet_1705

Alternate gene names: NA

Gene position: 1915074-1913656 (Counterclockwise)

Preceding gene: 78222917

Following gene: 78222913

Centisome position: 47.91

GC content: 60.96

Gene sequence:

>1419_bases
GTGAAGGTCCTCTTCATCCATCCCTTCGGCAGCAACTGGCTGGGGACCGGAACCGATATAACCACCATCTTCAATCTCAT
GCCCCCCCTGGGGTTGCTCAGCATAGCCGCCTTTCTTGAGGCCCGGGGAATCGGCACCGAAGTCATCGACTGCTATGCCA
CGCCGATGCCGGCTGAAACCCTGGTGGCCGAGGTAATCCGCCGCCGCCCGGATGTGGTGGGCTTTTCCTGCACCACGTCG
TCATTCCTTGAAGGCTACTCCATTGCCGAAAGGATCAAGGAAAAGGCCCCCGGCATCACGACGGTCTTCGGCGGCGCCCA
TGCCTGCTCCGTAGGCGTTGGGCTGCTGGACACCTTCCCGGCCATCGACTACCTGGTGATCGGCGAAGGGGAACAGACTT
TTTTCGAACTGGTGACCAACCTGGACCACGGTGGAAGCGGCATACCCGGCGTCGGCTACCGGGAGAACGGCAAGGGAGTC
ATCAGTGCCCTCCGCGAGCATATCGCCAACCTTGACGACCTCCCCTTCCCGGCCTACCACCGTCTTCCCCAGTTCCCCAA
ACGCTACATCCTTCCCCTCTTCAGCTATCCGAAGGCGCCGAACACCAGCATCATCTCCAGCCGGGGCTGCCCCTACCAGT
GCTCCTACTGCGACCGCTCGGTCTTCTCCCGGGGATTCCGCTTCAACTCGCCGGAGTACATCGTCGAGCACCTGAAAATG
TTGAACCGCGACTACGGGATCCGCCACGTCTTTTTCTATGACGACCTCTTCACCACCGACCGCGCCCGGGTAGCCCGTTT
CTGCGAACTGAAGGAACGGGAACGGCTACCGGTGACCTACAACTGCATCGCCCGCCTGGAGCATGTGGACGCGGAACTGC
TGCGGCTCCTCAAACGCTCCGGCTGCTGGCAGGTCAATTTCGGCATCGAGTCGGGGGATCCGGAGGTAATCAAGAAGCAC
CGCAAGTTCTACGGCCTGGACGAGGTACAGCGGAAACTGCAGTTGGTGAGGGACACGGGGATGCGGGTCAAGGGGCTCTT
CATGGTGGGGCTGCCGGGAGAGACCGAAGAATCCATCCGCCGGACCATCGACTACGCCTTGGCACTCCCCCTGGACGAAA
TCAACGTCACCAAGTTCACCCCCTTCCCCGGTGCGCCGCTCTACGCCACCATCCGCGAACAGGGGGAATTCGACGAGAAC
TGGCCGCTGATGAACTGCCTCAACTTCGTCTTTGTCCCCCACGGCATGACCCGTGAACAACTGGAAGGGCTCTACAACGA
ATTCATCAGCCGCTTCTACCGCCGGAGCCGCATCCATTGGGGCTACACGAAGATGCTCTGGAAGTCGCCCCACAGCGTGG
CTACCTTCCTGCGGCACCTTCCGGAGATCCTGGCCTTTGAACTGAAGCAGAAGTGGTGA

Upstream 100 bases:

>100_bases
TCGAGGTGATGACCGTTCGGCGACAGCGATAGCATTTGCTTTCTTCCATCAAACCGACTAGCATAGCGCCGCAATTCATT
ACGGCAACGAGGCGATTCAC

Downstream 100 bases:

>100_bases
CTGCTGTGATCCTTACGGATACTCAAGCGCGAATCGTCAAAGGAGTCAGGGCATGAAGCCTTATCCCTGTCTGGTAGCAT
TCCTGGTCTCGGGCTCTCTT

Product: cobalamin B12-binding/radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MKVLFIHPFGSNWLGTGTDITTIFNLMPPLGLLSIAAFLEARGIGTEVIDCYATPMPAETLVAEVIRRRPDVVGFSCTTS
SFLEGYSIAERIKEKAPGITTVFGGAHACSVGVGLLDTFPAIDYLVIGEGEQTFFELVTNLDHGGSGIPGVGYRENGKGV
ISALREHIANLDDLPFPAYHRLPQFPKRYILPLFSYPKAPNTSIISSRGCPYQCSYCDRSVFSRGFRFNSPEYIVEHLKM
LNRDYGIRHVFFYDDLFTTDRARVARFCELKERERLPVTYNCIARLEHVDAELLRLLKRSGCWQVNFGIESGDPEVIKKH
RKFYGLDEVQRKLQLVRDTGMRVKGLFMVGLPGETEESIRRTIDYALALPLDEINVTKFTPFPGAPLYATIREQGEFDEN
WPLMNCLNFVFVPHGMTREQLEGLYNEFISRFYRRSRIHWGYTKMLWKSPHSVATFLRHLPEILAFELKQKW

Sequences:

>Translated_472_residues
MKVLFIHPFGSNWLGTGTDITTIFNLMPPLGLLSIAAFLEARGIGTEVIDCYATPMPAETLVAEVIRRRPDVVGFSCTTS
SFLEGYSIAERIKEKAPGITTVFGGAHACSVGVGLLDTFPAIDYLVIGEGEQTFFELVTNLDHGGSGIPGVGYRENGKGV
ISALREHIANLDDLPFPAYHRLPQFPKRYILPLFSYPKAPNTSIISSRGCPYQCSYCDRSVFSRGFRFNSPEYIVEHLKM
LNRDYGIRHVFFYDDLFTTDRARVARFCELKERERLPVTYNCIARLEHVDAELLRLLKRSGCWQVNFGIESGDPEVIKKH
RKFYGLDEVQRKLQLVRDTGMRVKGLFMVGLPGETEESIRRTIDYALALPLDEINVTKFTPFPGAPLYATIREQGEFDEN
WPLMNCLNFVFVPHGMTREQLEGLYNEFISRFYRRSRIHWGYTKMLWKSPHSVATFLRHLPEILAFELKQKW
>Mature_472_residues
MKVLFIHPFGSNWLGTGTDITTIFNLMPPLGLLSIAAFLEARGIGTEVIDCYATPMPAETLVAEVIRRRPDVVGFSCTTS
SFLEGYSIAERIKEKAPGITTVFGGAHACSVGVGLLDTFPAIDYLVIGEGEQTFFELVTNLDHGGSGIPGVGYRENGKGV
ISALREHIANLDDLPFPAYHRLPQFPKRYILPLFSYPKAPNTSIISSRGCPYQCSYCDRSVFSRGFRFNSPEYIVEHLKM
LNRDYGIRHVFFYDDLFTTDRARVARFCELKERERLPVTYNCIARLEHVDAELLRLLKRSGCWQVNFGIESGDPEVIKKH
RKFYGLDEVQRKLQLVRDTGMRVKGLFMVGLPGETEESIRRTIDYALALPLDEINVTKFTPFPGAPLYATIREQGEFDEN
WPLMNCLNFVFVPHGMTREQLEGLYNEFISRFYRRSRIHWGYTKMLWKSPHSVATFLRHLPEILAFELKQKW

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53838; Mature: 53838

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLFIHPFGSNWLGTGTDITTIFNLMPPLGLLSIAAFLEARGIGTEVIDCYATPMPAET
CEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH
LVAEVIRRRPDVVGFSCTTSSFLEGYSIAERIKEKAPGITTVFGGAHACSVGVGLLDTFP
HHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC
AIDYLVIGEGEQTFFELVTNLDHGGSGIPGVGYRENGKGVISALREHIANLDDLPFPAYH
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHH
RLPQFPKRYILPLFSYPKAPNTSIISSRGCPYQCSYCDRSVFSRGFRFNSPEYIVEHLKM
CCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
LNRDYGIRHVFFYDDLFTTDRARVARFCELKERERLPVTYNCIARLEHVDAELLRLLKRS
HCCCCCCEEEEEECCHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
GCWQVNFGIESGDPEVIKKHRKFYGLDEVQRKLQLVRDTGMRVKGLFMVGLPGETEESIR
CCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHH
RTIDYALALPLDEINVTKFTPFPGAPLYATIREQGEFDENWPLMNCLNFVFVPHGMTREQ
HHHHHHHCCCCCCCCCEEECCCCCCCHHHEEHHCCCCCCCCCHHHHHHHHHCCCCCCHHH
LEGLYNEFISRFYRRSRIHWGYTKMLWKSPHSVATFLRHLPEILAFELKQKW
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVLFIHPFGSNWLGTGTDITTIFNLMPPLGLLSIAAFLEARGIGTEVIDCYATPMPAET
CEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH
LVAEVIRRRPDVVGFSCTTSSFLEGYSIAERIKEKAPGITTVFGGAHACSVGVGLLDTFP
HHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC
AIDYLVIGEGEQTFFELVTNLDHGGSGIPGVGYRENGKGVISALREHIANLDDLPFPAYH
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHH
RLPQFPKRYILPLFSYPKAPNTSIISSRGCPYQCSYCDRSVFSRGFRFNSPEYIVEHLKM
CCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
LNRDYGIRHVFFYDDLFTTDRARVARFCELKERERLPVTYNCIARLEHVDAELLRLLKRS
HCCCCCCEEEEEECCHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
GCWQVNFGIESGDPEVIKKHRKFYGLDEVQRKLQLVRDTGMRVKGLFMVGLPGETEESIR
CCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHH
RTIDYALALPLDEINVTKFTPFPGAPLYATIREQGEFDENWPLMNCLNFVFVPHGMTREQ
HHHHHHHCCCCCCCCCEEECCCCCCCHHHEEHHCCCCCCCCCHHHHHHHHHCCCCCCHHH
LEGLYNEFISRFYRRSRIHWGYTKMLWKSPHSVATFLRHLPEILAFELKQKW
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]