| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222913
Identifier: 78222913
GI number: 78222913
Start: 1913001
End: 1913603
Strand: Reverse
Name: 78222913
Synonym: Gmet_1704
Alternate gene names: NA
Gene position: 1913603-1913001 (Counterclockwise)
Preceding gene: 78222914
Following gene: 78222911
Centisome position: 47.87
GC content: 62.19
Gene sequence:
>603_bases ATGAAGCCTTATCCCTGTCTGGTAGCATTCCTGGTCTCGGGCTCTCTTCTTGCCACCTCCCCCTGCAGCGCCGCCGAATC GCCATCTGTCGCCACCGCCGGCCACGAATGGGCCTTCCTTGCCGGCTACGGCATAACCCACCGGGGCTTCGGCGCAACCC GCACCCAGGTGCAGACCGCAGATGCCATCGGACGCTTCGGCTGGTTCCTGTCGGACGAGGTGGGAAAAGGGTCATGGTAC CAAGGACGTCACGAACTGTTGGTGGAACTCCCCATCCATCTGGCGGTCGATCAGCGGGACCGGATCATGACCGGCGGCTA CCTTCTCGGGAGCTGGAAATTCACCGGACTGGCGGACGAGAAACTGTACCCCTACGTCTTTGCCGGCGGCGGGGTACTCT TCGTGGACCTGGGTCTCCCCACCATGGGGACACGGCTCGACTTCTCCTACCAGGGGGGAACCGGCATCCAGTATCTCATC GGGAAGGATACGGCCATCATGGGGGAATACCGCTACCACCACGTCTCCAACGCCGGCACCGCCGAGCCCAACGAACCGCT CAACTCCAGCAAGTTTCTGGTGGGTGTGTCGTGGTTTTTCTGA
Upstream 100 bases:
>100_bases CGGCACCTTCCGGAGATCCTGGCCTTTGAACTGAAGCAGAAGTGGTGACTGCTGTGATCCTTACGGATACTCAAGCGCGA ATCGTCAAAGGAGTCAGGGC
Downstream 100 bases:
>100_bases AATAGGTGCAGGAAAATGTGAACAGTGATCGAGCAATCGGTTGGGTTCTAAACTGAAAAAGCATGAATTCCTGATGGAAC TCATGCTTTTTCAGTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKPYPCLVAFLVSGSLLATSPCSAAESPSVATAGHEWAFLAGYGITHRGFGATRTQVQTADAIGRFGWFLSDEVGKGSWY QGRHELLVELPIHLAVDQRDRIMTGGYLLGSWKFTGLADEKLYPYVFAGGGVLFVDLGLPTMGTRLDFSYQGGTGIQYLI GKDTAIMGEYRYHHVSNAGTAEPNEPLNSSKFLVGVSWFF
Sequences:
>Translated_200_residues MKPYPCLVAFLVSGSLLATSPCSAAESPSVATAGHEWAFLAGYGITHRGFGATRTQVQTADAIGRFGWFLSDEVGKGSWY QGRHELLVELPIHLAVDQRDRIMTGGYLLGSWKFTGLADEKLYPYVFAGGGVLFVDLGLPTMGTRLDFSYQGGTGIQYLI GKDTAIMGEYRYHHVSNAGTAEPNEPLNSSKFLVGVSWFF >Mature_200_residues MKPYPCLVAFLVSGSLLATSPCSAAESPSVATAGHEWAFLAGYGITHRGFGATRTQVQTADAIGRFGWFLSDEVGKGSWY QGRHELLVELPIHLAVDQRDRIMTGGYLLGSWKFTGLADEKLYPYVFAGGGVLFVDLGLPTMGTRLDFSYQGGTGIQYLI GKDTAIMGEYRYHHVSNAGTAEPNEPLNSSKFLVGVSWFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21727; Mature: 21727
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYPCLVAFLVSGSLLATSPCSAAESPSVATAGHEWAFLAGYGITHRGFGATRTQVQTA CCCHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCEEEHH DAIGRFGWFLSDEVGKGSWYQGRHELLVELPIHLAVDQRDRIMTGGYLLGSWKFTGLADE HHHHHHCCEECCCCCCCCCCCCCEEEEEEECEEEEECCCCEEEECCEEEEEEEECCCCCC KLYPYVFAGGGVLFVDLGLPTMGTRLDFSYQGGTGIQYLIGKDTAIMGEYRYHHVSNAGT CCCCEEEECCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCEEEECCEEEEEECCCCC AEPNEPLNSSKFLVGVSWFF CCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKPYPCLVAFLVSGSLLATSPCSAAESPSVATAGHEWAFLAGYGITHRGFGATRTQVQTA CCCHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCEEEHH DAIGRFGWFLSDEVGKGSWYQGRHELLVELPIHLAVDQRDRIMTGGYLLGSWKFTGLADE HHHHHHCCEECCCCCCCCCCCCCEEEEEEECEEEEECCCCEEEECCEEEEEEEECCCCCC KLYPYVFAGGGVLFVDLGLPTMGTRLDFSYQGGTGIQYLIGKDTAIMGEYRYHHVSNAGT CCCCEEEECCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCEEEECCEEEEEECCCCC AEPNEPLNSSKFLVGVSWFF CCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA