| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is fabZ [H]
Identifier: 78222906
GI number: 78222906
Start: 1903873
End: 1904286
Strand: Direct
Name: fabZ [H]
Synonym: Gmet_1697
Alternate gene names: 78222906
Gene position: 1903873-1904286 (Clockwise)
Preceding gene: 78222905
Following gene: 78222907
Centisome position: 47.63
GC content: 65.46
Gene sequence:
>414_bases TTGCCATCGAGATCAGCGGAGGCGCTCCTGTTTAATCCCAACCCCGAAGCATATCTCCCCCACCGCCGTCCTTTTCTCCT TCTCGACCGCATCGTGGCGCTCCAACCGGGCGAGACGGCCACGGCCGCCATCTCCGTGACCGGCGGCACGAGGCACTTCC CGGACGTGCTCCTTATCGAGGCGATGGCCCAGCTGGGGGGGATCGCCGCCGGACATGAGGAGGGGGAGGGGGGATTCCTG GCGGCTATCGATCGGGCCACGTTCATCGGTTCCGCCTCAGCCGGCGATCTGCTGGAGGTGACAGTCAGGGTGATCAAGTC CTTCGGTCGTCTCCACCTGCTGGAAGGGGAGGTTTCCGTTGAGGGGCGGGTGCTGGCCACGGCCGGCTTTACCCTCGGCA TGGGGAGGATTTAG
Upstream 100 bases:
>100_bases TCGCTGGCTATGGGTGGGCTTGCCCTTGCGGCCCTGCTCCTTACGCTTCGGGAGGGGGAACAGGGCCTGCATCTGGCTGC TTCGCCGGAAGGCCCCTTCG
Downstream 100 bases:
>100_bases ATGCGAAAAGTGATATCCACGGTAATGACGCTGACGCTGCTCCTCGTTCTGGCATGGGGGGGGAGTGCCGCGGCCCGGCA GATCGCGCCGGTGGAAGGGC
Product: (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPSRSAEALLFNPNPEAYLPHRRPFLLLDRIVALQPGETATAAISVTGGTRHFPDVLLIEAMAQLGGIAAGHEEGEGGFL AAIDRATFIGSASAGDLLEVTVRVIKSFGRLHLLEGEVSVEGRVLATAGFTLGMGRI
Sequences:
>Translated_137_residues MPSRSAEALLFNPNPEAYLPHRRPFLLLDRIVALQPGETATAAISVTGGTRHFPDVLLIEAMAQLGGIAAGHEEGEGGFL AAIDRATFIGSASAGDLLEVTVRVIKSFGRLHLLEGEVSVEGRVLATAGFTLGMGRI >Mature_136_residues PSRSAEALLFNPNPEAYLPHRRPFLLLDRIVALQPGETATAAISVTGGTRHFPDVLLIEAMAQLGGIAAGHEEGEGGFLA AIDRATFIGSASAGDLLEVTVRVIKSFGRLHLLEGEVSVEGRVLATAGFTLGMGRI
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 14391; Mature: 14260
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRSAEALLFNPNPEAYLPHRRPFLLLDRIVALQPGETATAAISVTGGTRHFPDVLLIE CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHH AMAQLGGIAAGHEEGEGGFLAAIDRATFIGSASAGDLLEVTVRVIKSFGRLHLLEGEVSV HHHHHCCCCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCC EGRVLATAGFTLGMGRI CCEEEEECCCEECCCCC >Mature Secondary Structure PSRSAEALLFNPNPEAYLPHRRPFLLLDRIVALQPGETATAAISVTGGTRHFPDVLLIE CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHH AMAQLGGIAAGHEEGEGGFLAAIDRATFIGSASAGDLLEVTVRVIKSFGRLHLLEGEVSV HHHHHCCCCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCC EGRVLATAGFTLGMGRI CCEEEEECCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA