| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222882
Identifier: 78222882
GI number: 78222882
Start: 1880817
End: 1881008
Strand: Reverse
Name: 78222882
Synonym: Gmet_1673
Alternate gene names: NA
Gene position: 1881008-1880817 (Counterclockwise)
Preceding gene: 78222883
Following gene: 78222881
Centisome position: 47.06
GC content: 59.9
Gene sequence:
>192_bases GTGAACCGGAACGAAACCGCCTTTGAACTCTGGCGCCAGGACGACAACGGCAACCGGTTTCTGGTCGGCACCTTCCCCAA CCGCGCCGCCGCCGAGCGACAACTGACTGCCCTGACCCGCGTCCAGCACAAACAGATCTACTGGATTGCCGAGTGTCAAA TCATGAAACCACAGGAGGCCCCATGCAGGTAA
Upstream 100 bases:
>100_bases TTTCGACTGGGGCCTCCCCTTCTTCTATGGCCGTTCCGTCTTCGTGGGAATTGATAGAAGGAATTCCAGCCTGGGCACCG GTCCCTACTGGGCTTACTGA
Downstream 100 bases:
>100_bases TCGACGACAACCACTGCTTCATCTGCGGCAGCAATAACCCCATCGGACTTCACGCCGTTTTCACAACCGATCCGGAAAAG GGCCGGGCTGAAACCCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MNRNETAFELWRQDDNGNRFLVGTFPNRAAAERQLTALTRVQHKQIYWIAECQIMKPQEAPCR
Sequences:
>Translated_63_residues MNRNETAFELWRQDDNGNRFLVGTFPNRAAAERQLTALTRVQHKQIYWIAECQIMKPQEAPCR >Mature_63_residues MNRNETAFELWRQDDNGNRFLVGTFPNRAAAERQLTALTRVQHKQIYWIAECQIMKPQEAPCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7464; Mature: 7464
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNETAFELWRQDDNGNRFLVGTFPNRAAAERQLTALTRVQHKQIYWIAECQIMKPQEA CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCC PCR CCC >Mature Secondary Structure MNRNETAFELWRQDDNGNRFLVGTFPNRAAAERQLTALTRVQHKQIYWIAECQIMKPQEA CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCC PCR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA