| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222870
Identifier: 78222870
GI number: 78222870
Start: 1863872
End: 1864558
Strand: Direct
Name: 78222870
Synonym: Gmet_1661
Alternate gene names: NA
Gene position: 1863872-1864558 (Clockwise)
Preceding gene: 78222869
Following gene: 78222871
Centisome position: 46.63
GC content: 52.84
Gene sequence:
>687_bases GTGAAGGCCCTGTTCGTAAGAACCAATGATTTCCAGGGGGACGTATTCCGGAATATCGTCTCATTGCGTGAATCGCTCGA TCTCTTTGACGATCTCACCGACGAGGCGGGCCAGAGTCAGTATGCGACCGTTGCTGAAGCAAGAGTTAAAGAATTAATTC CCATCGGCCTGATCGATAGGGGTTTTCACTACACGACAGCCATTGACTACCCGTTCACCAAAGAGCCATTTTTACTTTCG CGCTATGGGAACGGGACGTTCGGCGTGTGGTATGGTTCCCTGCAATTGGAGACCAGCATCCATGAAACCGTCTTCCATAT GATGAGAGAGGAATCGATGGTTGAAGGGGTAACGGGGCGATTGGTGCGGGAAAGGGCTGTCTACCTGGTCCGCGCCCGCG CTGTTCTGATAGATCTGGTCGGGAAGGAAAAGCGATACCCGGATCTTGTTTCCGATGATTACAGCTTCACGCAGCAGATC GCTGAACGATTGCACAAAGAAGGGCATCCCGGGCTGCTGGCTCCCTCGGCGCGGTGTGCTGGAACGAACGTGGTGGCGTT CACCCCGAATATCCTGAATGACCCGCGGGTGAACTGTTATCTGACCTATACCTACGATTACCAGGCAAAGAGTGTCGAGG TTGAGCGGCAGCCTGGAGATGTCATTTATTCTCATCAGTTCACTTAG
Upstream 100 bases:
>100_bases CGGCATTCAACAATCTCACCCCTCTGGCGGTTATGAAGGAACAGGGAATTATCGGGCTCGCCAGGGTGGCGCGATATCTC GATTATTACCGAGGGCTCTA
Downstream 100 bases:
>100_bases GCGGATTTTTGAGAGAGCGCTGGCACCTGCGACCCTGGTGCCAGCAATGAATTTCACAAATGGAGGGAAACATGGCAGTA ACCGTTGTTGCAAAGGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: RES Domain-Containing Protein
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKALFVRTNDFQGDVFRNIVSLRESLDLFDDLTDEAGQSQYATVAEARVKELIPIGLIDRGFHYTTAIDYPFTKEPFLLS RYGNGTFGVWYGSLQLETSIHETVFHMMREESMVEGVTGRLVRERAVYLVRARAVLIDLVGKEKRYPDLVSDDYSFTQQI AERLHKEGHPGLLAPSARCAGTNVVAFTPNILNDPRVNCYLTYTYDYQAKSVEVERQPGDVIYSHQFT
Sequences:
>Translated_228_residues MKALFVRTNDFQGDVFRNIVSLRESLDLFDDLTDEAGQSQYATVAEARVKELIPIGLIDRGFHYTTAIDYPFTKEPFLLS RYGNGTFGVWYGSLQLETSIHETVFHMMREESMVEGVTGRLVRERAVYLVRARAVLIDLVGKEKRYPDLVSDDYSFTQQI AERLHKEGHPGLLAPSARCAGTNVVAFTPNILNDPRVNCYLTYTYDYQAKSVEVERQPGDVIYSHQFT >Mature_228_residues MKALFVRTNDFQGDVFRNIVSLRESLDLFDDLTDEAGQSQYATVAEARVKELIPIGLIDRGFHYTTAIDYPFTKEPFLLS RYGNGTFGVWYGSLQLETSIHETVFHMMREESMVEGVTGRLVRERAVYLVRARAVLIDLVGKEKRYPDLVSDDYSFTQQI AERLHKEGHPGLLAPSARCAGTNVVAFTPNILNDPRVNCYLTYTYDYQAKSVEVERQPGDVIYSHQFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25991; Mature: 25991
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALFVRTNDFQGDVFRNIVSLRESLDLFDDLTDEAGQSQYATVAEARVKELIPIGLIDR CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEECC GFHYTTAIDYPFTKEPFLLSRYGNGTFGVWYGSLQLETSIHETVFHMMREESMVEGVTGR CCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH LVRERAVYLVRARAVLIDLVGKEKRYPDLVSDDYSFTQQIAERLHKEGHPGLLAPSARCA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCC GTNVVAFTPNILNDPRVNCYLTYTYDYQAKSVEVERQPGDVIYSHQFT CCEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEECCC >Mature Secondary Structure MKALFVRTNDFQGDVFRNIVSLRESLDLFDDLTDEAGQSQYATVAEARVKELIPIGLIDR CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEECC GFHYTTAIDYPFTKEPFLLSRYGNGTFGVWYGSLQLETSIHETVFHMMREESMVEGVTGR CCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH LVRERAVYLVRARAVLIDLVGKEKRYPDLVSDDYSFTQQIAERLHKEGHPGLLAPSARCA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCC GTNVVAFTPNILNDPRVNCYLTYTYDYQAKSVEVERQPGDVIYSHQFT CCEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA