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The map label for this gene is 78222867

Identifier: 78222867

GI number: 78222867

Start: 1861847

End: 1862599

Strand: Direct

Name: 78222867

Synonym: Gmet_1658

Alternate gene names: NA

Gene position: 1861847-1862599 (Clockwise)

Preceding gene: 78222866

Following gene: 78222868

Centisome position: 46.58

GC content: 56.71

Gene sequence:

>753_bases
ATGAGTAAGCCGACCGCAGAGCTGGCCGAAGTTTTTTCCTCTGTCCAGGGAGAGGGGATGCTGATAGGGCTGCGGCAGGT
TTTCGTCCGTTTTCGTGGCTGTAATCTCACCTGCGACTATTGCGACACCCCCACTGAAATAACCGCCGAGCCCTGCCTTG
TGGAGCAGACTCCCGGCCGGCGCGACTTTGTCCCCACCGCCAACCCCGTGGCCCTGGATCGTATCGTCTCACTCATCGAC
GGATGGCAGCGGGGATGGCCGGGGGTCCACCATTCAATCAGCATTACCGGCGGGGAACCGCTTCTCAGTCACACCGTTCT
TTCGGCCTGGCTCCCGGAACTGAGAAATATCCTTCCCGTCTATCTGGAAACCAACGGCATCATGCACTCGGTCCTTGGGC
TTCTCATAGACCATATCGATATCATCGGCATGGACATCAAGATCCCTTCCACCTCGGGATGCACCGGCCTGTGGGACGAC
CACCGGAGTTTTCTTCAAATTGCCGCCAGAAAGAATGTCTTTGTAAAAATTATCGTAGGGGATGAAACGGAGGAATGGGA
AATTATCCGCGCCAGTGAACTGATTGCCGCCATAAACAGCCATATTCCCCTGATCCTCCAGCCCGTCACCGAACCGGGGG
GGAGAGTTGGCATTAACCCCGTCAGGGCGCTGGAATTCCAGGAGATTGCCTGCCGCCACCTGGATGAAGTTCGCATCATC
CCCCAGACCCACAAGTTCATGGCCCAGCTGTAA

Upstream 100 bases:

>100_bases
CGCTTTCTCTACGAGGAGCTTTCCAAGCGGCTCAATGACGGCAATGTCAAGGTCGAGAGCATCACCGTCTGGGAGTCGGA
CAACGCTGCCGCCACCTACT

Downstream 100 bases:

>100_bases
GGGAGGACGGGAGCAACGTGATCGTCGAAACAATGACCATGGTCGAATTCGAGGAGGGGCTGAAGCGGACCAGGACGGTT
TTCGTCCCCTTCGGGTCCGT

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSKPTAELAEVFSSVQGEGMLIGLRQVFVRFRGCNLTCDYCDTPTEITAEPCLVEQTPGRRDFVPTANPVALDRIVSLID
GWQRGWPGVHHSISITGGEPLLSHTVLSAWLPELRNILPVYLETNGIMHSVLGLLIDHIDIIGMDIKIPSTSGCTGLWDD
HRSFLQIAARKNVFVKIIVGDETEEWEIIRASELIAAINSHIPLILQPVTEPGGRVGINPVRALEFQEIACRHLDEVRII
PQTHKFMAQL

Sequences:

>Translated_250_residues
MSKPTAELAEVFSSVQGEGMLIGLRQVFVRFRGCNLTCDYCDTPTEITAEPCLVEQTPGRRDFVPTANPVALDRIVSLID
GWQRGWPGVHHSISITGGEPLLSHTVLSAWLPELRNILPVYLETNGIMHSVLGLLIDHIDIIGMDIKIPSTSGCTGLWDD
HRSFLQIAARKNVFVKIIVGDETEEWEIIRASELIAAINSHIPLILQPVTEPGGRVGINPVRALEFQEIACRHLDEVRII
PQTHKFMAQL
>Mature_249_residues
SKPTAELAEVFSSVQGEGMLIGLRQVFVRFRGCNLTCDYCDTPTEITAEPCLVEQTPGRRDFVPTANPVALDRIVSLIDG
WQRGWPGVHHSISITGGEPLLSHTVLSAWLPELRNILPVYLETNGIMHSVLGLLIDHIDIIGMDIKIPSTSGCTGLWDDH
RSFLQIAARKNVFVKIIVGDETEEWEIIRASELIAAINSHIPLILQPVTEPGGRVGINPVRALEFQEIACRHLDEVRIIP
QTHKFMAQL

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 27739; Mature: 27608

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPTAELAEVFSSVQGEGMLIGLRQVFVRFRGCNLTCDYCDTPTEITAEPCLVEQTPGR
CCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCC
RDFVPTANPVALDRIVSLIDGWQRGWPGVHHSISITGGEPLLSHTVLSAWLPELRNILPV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEE
YLETNGIMHSVLGLLIDHIDIIGMDIKIPSTSGCTGLWDDHRSFLQIAARKNVFVKIIVG
EEECCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC
DETEEWEIIRASELIAAINSHIPLILQPVTEPGGRVGINPVRALEFQEIACRHLDEVRII
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHEEEC
PQTHKFMAQL
CHHHHHHHCC
>Mature Secondary Structure 
SKPTAELAEVFSSVQGEGMLIGLRQVFVRFRGCNLTCDYCDTPTEITAEPCLVEQTPGR
CCCHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCC
RDFVPTANPVALDRIVSLIDGWQRGWPGVHHSISITGGEPLLSHTVLSAWLPELRNILPV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEE
YLETNGIMHSVLGLLIDHIDIIGMDIKIPSTSGCTGLWDDHRSFLQIAARKNVFVKIIVG
EEECCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC
DETEEWEIIRASELIAAINSHIPLILQPVTEPGGRVGINPVRALEFQEIACRHLDEVRII
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHEEEC
PQTHKFMAQL
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]